RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 DSCR10P59022 87 aa5.28□□□□□ -1.56
SCN9A-201ENST00000303354 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
SCN9A-201ENST00000303354 KIF25-AS1Q9Y6Z4 181 aa5.28□□□□□ -1.56
SCN9A-201ENST00000303354 TM2D3Q9BRN9 247 aa5.28□□□□□ -1.56
SCN9A-201ENST00000303354 EML5Q05BV3 1969 aa5.28□□□□□ -1.56
SCN9A-201ENST00000303354 SPG11Q96JI7 2443 aa5.28□□□□□ -1.56
SCN9A-201ENST00000303354 HCFC1P51610 2035 aa5.27□□□□□ -1.57
SCN9A-201ENST00000303354 BRCA2P51587 3418 aa5.27□□□□□ -1.57
SCN9A-201ENST00000303354 COX7CP15954 63 aa5.27□□□□□ -1.57
SCN9A-201ENST00000303354 CSDC2Q9Y534 153 aaKnown RBP5.27□□□□□ -1.57
SCN9A-201ENST00000303354 NAV3Q8IVL0 2385 aa5.27□□□□□ -1.57
SCN9A-201ENST00000303354 SZT2Q5T011 3432 aa5.27□□□□□ -1.57
SCN9A-201ENST00000303354 FAM218AQ96MZ4 157 aa5.25□□□□□ -1.57
SCN9A-201ENST00000303354 LINC01554Q52M75 96 aa5.25□□□□□ -1.57
SCN9A-201ENST00000303354 C15orf56Q8N910 161 aa5.25□□□□□ -1.57
SCN9A-201ENST00000303354 SPAG11AQ6PDA7 123 aa5.25□□□□□ -1.57
SCN9A-201ENST00000303354 PTPRBP23467 1997 aa5.25□□□□□ -1.57
SCN9A-201ENST00000303354 TRAV7A0A075B6U4 112 aa5.24□□□□□ -1.57
SCN9A-201ENST00000303354 CASC10Q5T4H9 136 aa5.24□□□□□ -1.57
SCN9A-201ENST00000303354 AGRNO00468 2067 aa5.24□□□□□ -1.57
SCN9A-201ENST00000303354 OBSCN-AS1Q96MR7 158 aa5.24□□□□□ -1.57
SCN9A-201ENST00000303354 V9GYY9 64 aa5.24□□□□□ -1.57
SCN9A-201ENST00000303354 CELSR3Q9NYQ7 3312 aa5.24□□□□□ -1.57
SCN9A-201ENST00000303354 IGHV3OR16-9A0A0B4J2B5 98 aa5.24□□□□□ -1.57
SCN9A-201ENST00000303354 NOTCH2Q04721 2471 aa5.23□□□□□ -1.57
SCN9A-201ENST00000303354 COL27A1Q8IZC6 1860 aaPredicted RBP5.23□□□□□ -1.57
SCN9A-201ENST00000303354 CEP350Q5VT06 3117 aa5.23□□□□□ -1.57
SCN9A-201ENST00000303354 A0A1B0GU69 56 aa5.23□□□□□ -1.57
SCN9A-201ENST00000303354 BCE1O60756 84 aa5.23□□□□□ -1.57
SCN9A-201ENST00000303354 APLNQ9ULZ1 77 aa5.22□□□□□ -1.57
SCN9A-201ENST00000303354 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
SCN9A-201ENST00000303354 IGLV6-57P01721 117 aa5.22□□□□□ -1.57
SCN9A-201ENST00000303354 Q8NBF4 154 aa5.22□□□□□ -1.57
SCN9A-201ENST00000303354 IMUPQ9GZP8 106 aa5.22□□□□□ -1.57
SCN9A-201ENST00000303354 NDUFC1O43677 76 aa5.21□□□□□ -1.57
SCN9A-201ENST00000303354 FAM19A4Q96LR4 140 aa5.21□□□□□ -1.58
SCN9A-201ENST00000303354 F8WDY8 70 aa5.2□□□□□ -1.58
SCN9A-201ENST00000303354 A0A087WTM6 91 aa5.19□□□□□ -1.58
SCN9A-201ENST00000303354 PIEZO2Q9H5I5 2752 aa5.19□□□□□ -1.58
SCN9A-201ENST00000303354 ELOF1P60002 83 aaKnown RBP5.19□□□□□ -1.58
SCN9A-201ENST00000303354 DNAH14Q0VDD8 3507 aa5.19□□□□□ -1.58
SCN9A-201ENST00000303354 PCSK5Q92824 1860 aa5.19□□□□□ -1.58
SCN9A-201ENST00000303354 LINC00304Q8N9R0 145 aa5.19□□□□□ -1.58
SCN9A-201ENST00000303354 TRANK1O15050 2925 aa5.19□□□□□ -1.58
SCN9A-201ENST00000303354 SONP18583 2426 aaKnown RBP5.19□□□□□ -1.58
SCN9A-201ENST00000303354 Q6ZRX8 168 aa5.18□□□□□ -1.58
SCN9A-201ENST00000303354 K7EQZ3 153 aa5.18□□□□□ -1.58
SCN9A-201ENST00000303354 LINC00528Q8N1L1 170 aa5.18□□□□□ -1.58
SCN9A-201ENST00000303354 BPTFQ12830 3046 aa5.17□□□□□ -1.58
SCN9A-201ENST00000303354 M0R2T5 61 aa5.17□□□□□ -1.58
SCN9A-201ENST00000303354 C1orf195Q5TG92 126 aa5.17□□□□□ -1.58
SCN9A-201ENST00000303354 IGLV5-37A0A075B6J1 123 aa5.17□□□□□ -1.58
SCN9A-201ENST00000303354 TNP2Q05952 138 aa5.17□□□□□ -1.58
SCN9A-201ENST00000303354 LINC01561Q8N1V8 128 aa5.17□□□□□ -1.58
SCN9A-201ENST00000303354 ACYP2P14621 99 aa5.16□□□□□ -1.58
SCN9A-201ENST00000303354 H3BNG1 76 aa5.16□□□□□ -1.58
SCN9A-201ENST00000303354 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.58
SCN9A-201ENST00000303354 IGLV5-39A0A0G2JS06 123 aa5.15□□□□□ -1.58
SCN9A-201ENST00000303354 COX8CQ7Z4L0 72 aa5.15□□□□□ -1.59
SCN9A-201ENST00000303354 A0A0D9SG42 100 aa5.14□□□□□ -1.59
SCN9A-201ENST00000303354 C19orf73Q9NVV2 129 aa5.14□□□□□ -1.59
SCN9A-201ENST00000303354 GVQW2A0A096LPI5 108 aaPredicted RBP5.14□□□□□ -1.59
SCN9A-201ENST00000303354 NCOR2Q9Y618 2525 aa5.14□□□□□ -1.59
SCN9A-201ENST00000303354 CSNK1G2-AS1Q8NCQ2 148 aa5.14□□□□□ -1.59
SCN9A-201ENST00000303354 ABCA2Q9BZC7 2435 aa5.14□□□□□ -1.59
SCN9A-201ENST00000303354 IGLV1-50A0A075B6I6 118 aa5.13□□□□□ -1.59
SCN9A-201ENST00000303354 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
SCN9A-201ENST00000303354 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
SCN9A-201ENST00000303354 C9orf129Q5T035 196 aaKnown RBP5.13□□□□□ -1.59
SCN9A-201ENST00000303354 VPREB1P12018 145 aa5.13□□□□□ -1.59
SCN9A-201ENST00000303354 KRTAP1-3Q8IUG1 177 aa5.12□□□□□ -1.59
SCN9A-201ENST00000303354 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
SCN9A-201ENST00000303354 TRBV7-4A0A0J9YYF1 115 aa5.12□□□□□ -1.59
SCN9A-201ENST00000303354 PRRC2CQ9Y520 2896 aaKnown RBP5.12□□□□□ -1.59
SCN9A-201ENST00000303354 Q6ZQT0 140 aa5.11□□□□□ -1.59
SCN9A-201ENST00000303354 SSBP3-AS1Q7Z2R9 100 aa5.11□□□□□ -1.59
SCN9A-201ENST00000303354 Q8N1X5 172 aa5.11□□□□□ -1.59
SCN9A-201ENST00000303354 TTC28Q96AY4 2481 aa5.11□□□□□ -1.59
SCN9A-201ENST00000303354 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
SCN9A-201ENST00000303354 PLA2G2DQ9UNK4 145 aa5.11□□□□□ -1.59
SCN9A-201ENST00000303354 PRUNE2Q8WUY3 3088 aa5.1□□□□□ -1.59
SCN9A-201ENST00000303354 IGFL1Q6UW32 110 aa5.1□□□□□ -1.59
SCN9A-201ENST00000303354 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
SCN9A-201ENST00000303354 ZNF861PO60384 105 aa5.1□□□□□ -1.59
SCN9A-201ENST00000303354 IGF2RP11717 2491 aa5.1□□□□□ -1.59
SCN9A-201ENST00000303354 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
SCN9A-201ENST00000303354 EIF4EBP3O60516 100 aaPredicted RBP5.09□□□□□ -1.59
SCN9A-201ENST00000303354 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
SCN9A-201ENST00000303354 GIG44P09565 113 aaPredicted RBP5.09□□□□□ -1.59
SCN9A-201ENST00000303354 A0A096LNT2 108 aa5.08□□□□□ -1.6
SCN9A-201ENST00000303354 SMCPP49901 116 aaPredicted RBP5.08□□□□□ -1.6
SCN9A-201ENST00000303354 CXCL6P80162 114 aa5.08□□□□□ -1.6
SCN9A-201ENST00000303354 ANKHD1Q8IWZ3 2542 aaKnown RBP5.07□□□□□ -1.6
SCN9A-201ENST00000303354 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
SCN9A-201ENST00000303354 REV3LO60673 3130 aa5.07□□□□□ -1.6
SCN9A-201ENST00000303354 CCDC168Q8NDH2 2452 aa5.07□□□□□ -1.6
SCN9A-201ENST00000303354 RBM12B-AS1Q9P1G2 102 aa5.07□□□□□ -1.6
SCN9A-201ENST00000303354 NAV2Q8IVL1 2488 aa5.06□□□□□ -1.6
SCN9A-201ENST00000303354 KRTAP1-1Q07627 177 aa5.06□□□□□ -1.6
SCN9A-201ENST00000303354 TRAV22A0A0B4J277 110 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms