RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
SKA3-201ENST00000298260 IGLV10-54A0A075B6I4 117 aa9.29□□□□□ -0.92
SKA3-201ENST00000298260 LINC00167Q96N53 147 aa9.29□□□□□ -0.92
SKA3-201ENST00000298260 Q8N3U1 123 aa9.28□□□□□ -0.92
SKA3-201ENST00000298260 TRBV6-8A0A0A6YYG3 113 aa9.28□□□□□ -0.92
SKA3-201ENST00000298260 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
SKA3-201ENST00000298260 Q8N9L7 120 aa9.27□□□□□ -0.92
SKA3-201ENST00000298260 KLKP1Q107X0 134 aa9.27□□□□□ -0.93
SKA3-201ENST00000298260 LINC00269Q8N2A0 174 aa9.27□□□□□ -0.93
SKA3-201ENST00000298260 LINC00482Q8N8I6 264 aa9.26□□□□□ -0.93
SKA3-201ENST00000298260 HIVEP2P31629 2446 aa9.26□□□□□ -0.93
SKA3-201ENST00000298260 HIVEP1P15822 2718 aa9.26□□□□□ -0.93
SKA3-201ENST00000298260 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
SKA3-201ENST00000298260 SMIM26A0A096LP01 95 aa9.24□□□□□ -0.93
SKA3-201ENST00000298260 Q6ZQY7 126 aa9.24□□□□□ -0.93
SKA3-201ENST00000298260 TRBV10-3A0A0K0K1G6 114 aa9.24□□□□□ -0.93
SKA3-201ENST00000298260 DEFB130BP0DP73 79 aa9.24□□□□□ -0.93
SKA3-201ENST00000298260 DEFB130AP0DP74 79 aa9.24□□□□□ -0.93
SKA3-201ENST00000298260 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
SKA3-201ENST00000298260 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
SKA3-201ENST00000298260 DEFB113Q30KQ7 82 aa9.22□□□□□ -0.93
SKA3-201ENST00000298260 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
SKA3-201ENST00000298260 C6orf223Q8N319 242 aa9.21□□□□□ -0.93
SKA3-201ENST00000298260 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
SKA3-201ENST00000298260 DAD1P61803 113 aa9.2□□□□□ -0.94
SKA3-201ENST00000298260 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
SKA3-201ENST00000298260 MIFP14174 115 aa9.2□□□□□ -0.94
SKA3-201ENST00000298260 LRCOL1A6NCL2 159 aa9.19□□□□□ -0.94
SKA3-201ENST00000298260 TRBV7-4A0A0J9YYF1 115 aa9.19□□□□□ -0.94
SKA3-201ENST00000298260 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
SKA3-201ENST00000298260 SMR3AQ99954 134 aa9.19□□□□□ -0.94
SKA3-201ENST00000298260 ESM1Q9NQ30 184 aa9.19□□□□□ -0.94
SKA3-201ENST00000298260 F8P00451 2351 aa9.19□□□□□ -0.94
SKA3-201ENST00000298260 Q8IZM0 81 aa9.18□□□□□ -0.94
SKA3-201ENST00000298260 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
SKA3-201ENST00000298260 NREPQ16612 68 aa9.18□□□□□ -0.94
SKA3-201ENST00000298260 KRTAP1-3Q8IUG1 177 aa9.18□□□□□ -0.94
SKA3-201ENST00000298260 GYPEP15421 78 aa9.17□□□□□ -0.94
SKA3-201ENST00000298260 UNQ6190/PRO20217Q6UXQ8 127 aa9.17□□□□□ -0.94
SKA3-201ENST00000298260 LINC01006Q8NI28 216 aa9.17□□□□□ -0.94
SKA3-201ENST00000298260 MUC7Q8TAX7 377 aa9.17□□□□□ -0.94
SKA3-201ENST00000298260 NSD1Q96L73 2696 aaPredicted RBP9.17□□□□□ -0.94
SKA3-201ENST00000298260 TMEM254Q8TBM7 123 aa9.16□□□□□ -0.94
SKA3-201ENST00000298260 ATRQ13535 2644 aa9.16□□□□□ -0.94
SKA3-201ENST00000298260 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
SKA3-201ENST00000298260 IGHV4-31P0DP07 118 aa9.16□□□□□ -0.94
SKA3-201ENST00000298260 BPY2O14599 106 aa9.15□□□□□ -0.94
SKA3-201ENST00000298260 LINC01356Q8N9X3 169 aa9.15□□□□□ -0.94
SKA3-201ENST00000298260 C4orf3Q8WVX3 66 aa9.15□□□□□ -0.94
SKA3-201ENST00000298260 Q6YL49 198 aa9.15□□□□□ -0.94
SKA3-201ENST00000298260 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
SKA3-201ENST00000298260 TENM1Q9UKZ4 2725 aa9.14□□□□□ -0.95
SKA3-201ENST00000298260 C1orf195Q5TG92 126 aa9.14□□□□□ -0.95
SKA3-201ENST00000298260 CHCHD10Q8WYQ3 142 aaPredicted RBP9.13□□□□□ -0.95
SKA3-201ENST00000298260 C16orf74Q96GX8 76 aa9.13□□□□□ -0.95
SKA3-201ENST00000298260 ANK3Q12955 4377 aaKnown RBP9.13□□□□□ -0.95
SKA3-201ENST00000298260 MAST4O15021 2626 aa9.12□□□□□ -0.95
SKA3-201ENST00000298260 HIGD2AQ9BW72 106 aa9.12□□□□□ -0.95
SKA3-201ENST00000298260 CXCL6P80162 114 aa9.12□□□□□ -0.95
SKA3-201ENST00000298260 VWFP04275 2813 aa9.12□□□□□ -0.95
SKA3-201ENST00000298260 ANGP03950 147 aaKnown RBP9.11□□□□□ -0.95
SKA3-201ENST00000298260 DSCR9P59020 149 aa9.1□□□□□ -0.95
SKA3-201ENST00000298260 DEFB4AO15263 64 aa9.1□□□□□ -0.95
SKA3-201ENST00000298260 PRB2P02812 416 aaPredicted RBP9.1□□□□□ -0.95
SKA3-201ENST00000298260 CELA1Q9UNI1 258 aa9.09□□□□□ -0.95
SKA3-201ENST00000298260 C3orf84H3BNL1 204 aa9.09□□□□□ -0.96
SKA3-201ENST00000298260 BCE1O60756 84 aa9.09□□□□□ -0.96
SKA3-201ENST00000298260 F8WDY8 70 aa9.08□□□□□ -0.96
SKA3-201ENST00000298260 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
SKA3-201ENST00000298260 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
SKA3-201ENST00000298260 SEC61GP60059 68 aa9.08□□□□□ -0.96
SKA3-201ENST00000298260 CCL24O00175 119 aa9.07□□□□□ -0.96
SKA3-201ENST00000298260 V9GYY9 64 aa9.07□□□□□ -0.96
SKA3-201ENST00000298260 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
SKA3-201ENST00000298260 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
SKA3-201ENST00000298260 REG3AQ06141 175 aa9.06□□□□□ -0.96
SKA3-201ENST00000298260 KLK12Q9UKR0 248 aa9.06□□□□□ -0.96
SKA3-201ENST00000298260 PRYO14603 147 aa9.06□□□□□ -0.96
SKA3-201ENST00000298260 NDUFC1O43677 76 aa9.05□□□□□ -0.96
SKA3-201ENST00000298260 IGLV6-57P01721 117 aa9.05□□□□□ -0.96
SKA3-201ENST00000298260 FUSP35637 526 aaKnown RBP eCLIP9.05□□□□□ -0.96
SKA3-201ENST00000298260 COX17Q14061 63 aa9.05□□□□□ -0.96
SKA3-201ENST00000298260 IGKV4-1P06312 121 aa9.05□□□□□ -0.96
SKA3-201ENST00000298260 SPAG11BQ08648 103 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 A0A1B0GUV1 79 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 ESRGQ1W209 222 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 Q6ZTC4 211 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 PRR4Q16378 134 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
SKA3-201ENST00000298260 OCR1Q9BZK8 76 aa9.03□□□□□ -0.96
SKA3-201ENST00000298260 C19orf73Q9NVV2 129 aa9.03□□□□□ -0.96
SKA3-201ENST00000298260 DIRC1Q969H9 104 aa9.02□□□□□ -0.97
SKA3-201ENST00000298260 ZNF73O43830 326 aaPredicted RBP9.02□□□□□ -0.97
SKA3-201ENST00000298260 STAB1Q9NY15 2570 aa9.01□□□□□ -0.97
SKA3-201ENST00000298260 TRRAPQ9Y4A5 3859 aa9.01□□□□□ -0.97
SKA3-201ENST00000298260 KRTAP1-1Q07627 177 aa9.01□□□□□ -0.97
SKA3-201ENST00000298260 PSPHP1O15172 72 aa9□□□□□ -0.97
SKA3-201ENST00000298260 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms