RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 MRPL55Q7Z7F7 128 aaKnown RBP8.09□□□□□ -1.11
VPS33A-201ENST00000267199 IGKV4-1P06312 121 aa8.09□□□□□ -1.11
VPS33A-201ENST00000267199 IGLV5-45A0A087WSX0 123 aa8.09□□□□□ -1.11
VPS33A-201ENST00000267199 LINC00575Q6W349 94 aa8.08□□□□□ -1.12
VPS33A-201ENST00000267199 PRYO14603 147 aa8.08□□□□□ -1.12
VPS33A-201ENST00000267199 PSPHP1O15172 72 aa8.08□□□□□ -1.12
VPS33A-201ENST00000267199 MUC7Q8TAX7 377 aa8.08□□□□□ -1.12
VPS33A-201ENST00000267199 TRBV7-6A0A0J9YX20 115 aa8.07□□□□□ -1.12
VPS33A-201ENST00000267199 ITPR3Q14573 2671 aa8.07□□□□□ -1.12
VPS33A-201ENST00000267199 BOD1L1Q8NFC6 3051 aa8.07□□□□□ -1.12
VPS33A-201ENST00000267199 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
VPS33A-201ENST00000267199 CFAP46Q8IYW2 2715 aa8.06□□□□□ -1.12
VPS33A-201ENST00000267199 A6NED7 52 aa8.05□□□□□ -1.12
VPS33A-201ENST00000267199 OXLD1Q5BKU9 147 aa8.05□□□□□ -1.12
VPS33A-201ENST00000267199 RPS28P62857 69 aaKnown RBP8.05□□□□□ -1.12
VPS33A-201ENST00000267199 A0A1B0GUV1 79 aa8.05□□□□□ -1.12
VPS33A-201ENST00000267199 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.04□□□□□ -1.12
VPS33A-201ENST00000267199 C16orf95Q9H693 158 aa8.04□□□□□ -1.12
VPS33A-201ENST00000267199 LINC00208Q96KT6 92 aa8.04□□□□□ -1.12
VPS33A-201ENST00000267199 C1orf137Q5JT78 98 aa8.03□□□□□ -1.12
VPS33A-201ENST00000267199 ZNF575Q86XF7 245 aa8.03□□□□□ -1.12
VPS33A-201ENST00000267199 REV3LO60673 3130 aa8.03□□□□□ -1.12
VPS33A-201ENST00000267199 EYSQ5T1H1 3165 aa8.02□□□□□ -1.12
VPS33A-201ENST00000267199 DEFB116Q30KQ4 102 aa8.02□□□□□ -1.13
VPS33A-201ENST00000267199 PRO0628Q9UI54 55 aa8.02□□□□□ -1.13
VPS33A-201ENST00000267199 DHRS4-AS1Q9P1J3 65 aa8.02□□□□□ -1.13
VPS33A-201ENST00000267199 ATRQ13535 2644 aa8.02□□□□□ -1.13
VPS33A-201ENST00000267199 ADGRG4Q8IZF6 3080 aa8.02□□□□□ -1.13
VPS33A-201ENST00000267199 TRAV10A0A0B4J240 114 aa8.01□□□□□ -1.13
VPS33A-201ENST00000267199 PMAIP1Q13794 54 aa8.01□□□□□ -1.13
VPS33A-201ENST00000267199 SPATA3Q8NHX4 192 aa8.01□□□□□ -1.13
VPS33A-201ENST00000267199 RETNQ9HD89 108 aa8.01□□□□□ -1.13
VPS33A-201ENST00000267199 EGFEM1PQ0D2K5 195 aa8□□□□□ -1.13
VPS33A-201ENST00000267199 LINC01561Q8N1V8 128 aa8□□□□□ -1.13
VPS33A-201ENST00000267199 CHD6Q8TD26 2715 aa8□□□□□ -1.13
VPS33A-201ENST00000267199 FSHBP01225 129 aa7.99□□□□□ -1.13
VPS33A-201ENST00000267199 ESRGQ1W209 222 aa7.99□□□□□ -1.13
VPS33A-201ENST00000267199 B9D2Q9BPU9 175 aa7.99□□□□□ -1.13
VPS33A-201ENST00000267199 COL6A3P12111 3177 aa7.99□□□□□ -1.13
VPS33A-201ENST00000267199 MGAM2Q2M2H8 2515 aa7.98□□□□□ -1.13
VPS33A-201ENST00000267199 C10orf25Q5T742 122 aa7.98□□□□□ -1.13
VPS33A-201ENST00000267199 TM2D3Q9BRN9 247 aa7.98□□□□□ -1.13
VPS33A-201ENST00000267199 KALRNO60229 2985 aa7.98□□□□□ -1.13
VPS33A-201ENST00000267199 CXCL6P80162 114 aa7.97□□□□□ -1.13
VPS33A-201ENST00000267199 Q6ZTC4 211 aa7.97□□□□□ -1.13
VPS33A-201ENST00000267199 PRR15LQ9BU68 103 aa7.97□□□□□ -1.13
VPS33A-201ENST00000267199 USP34Q70CQ2 3546 aa7.96□□□□□ -1.14
VPS33A-201ENST00000267199 Q6ZRU5 148 aa7.96□□□□□ -1.14
VPS33A-201ENST00000267199 Q6ZQT0 140 aa7.95□□□□□ -1.14
VPS33A-201ENST00000267199 C9orf129Q5T035 196 aaKnown RBP7.95□□□□□ -1.14
VPS33A-201ENST00000267199 SPINK6Q6UWN8 80 aa7.95□□□□□ -1.14
VPS33A-201ENST00000267199 SMIM29Q86T20 159 aa7.95□□□□□ -1.14
VPS33A-201ENST00000267199 A0A087WSZ3 146 aa7.94□□□□□ -1.14
VPS33A-201ENST00000267199 LYPD5Q6UWN5 251 aa7.93□□□□□ -1.14
VPS33A-201ENST00000267199 HELZ2Q9BYK8 2649 aaKnown RBP7.93□□□□□ -1.14
VPS33A-201ENST00000267199 X6R8D5 127 aa7.92□□□□□ -1.14
VPS33A-201ENST00000267199 PCOTHQ58A44 107 aa7.92□□□□□ -1.14
VPS33A-201ENST00000267199 ATMQ13315 3056 aa7.91□□□□□ -1.14
VPS33A-201ENST00000267199 A0A096LNT2 108 aa7.91□□□□□ -1.14
VPS33A-201ENST00000267199 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
VPS33A-201ENST00000267199 IGLV9-49A0A0B4J1Y8 123 aa7.9□□□□□ -1.14
VPS33A-201ENST00000267199 LINC00474Q9P2X8 69 aa7.9□□□□□ -1.14
VPS33A-201ENST00000267199 C6orf48Q9UBA6 75 aa7.9□□□□□ -1.14
VPS33A-201ENST00000267199 SPTBN5Q9NRC6 3674 aaKnown RBP7.9□□□□□ -1.15
VPS33A-201ENST00000267199 C14orf177Q52M58 125 aa7.9□□□□□ -1.15
VPS33A-201ENST00000267199 TACC2O95359 2948 aa7.89□□□□□ -1.15
VPS33A-201ENST00000267199 MAST4O15021 2626 aa7.89□□□□□ -1.15
VPS33A-201ENST00000267199 CASC2Q6XLA1 102 aa7.88□□□□□ -1.15
VPS33A-201ENST00000267199 DMXL2Q8TDJ6 3036 aa7.88□□□□□ -1.15
VPS33A-201ENST00000267199 CFAP47Q6ZTR5 3102 aa7.88□□□□□ -1.15
VPS33A-201ENST00000267199 HCG22E2RYF7 251 aa7.87□□□□□ -1.15
VPS33A-201ENST00000267199 LINC00336Q6ZUF6 198 aa7.87□□□□□ -1.15
VPS33A-201ENST00000267199 FLNCQ14315 2725 aa7.87□□□□□ -1.15
VPS33A-201ENST00000267199 GCN1Q92616 2671 aaKnown RBP7.87□□□□□ -1.15
VPS33A-201ENST00000267199 H0Y9P7 68 aa7.86□□□□□ -1.15
VPS33A-201ENST00000267199 LOC110117498A0A087WWA1 95 aa7.86□□□□□ -1.15
VPS33A-201ENST00000267199 BCE1O60756 84 aa7.86□□□□□ -1.15
VPS33A-201ENST00000267199 PRLHP81277 87 aa7.86□□□□□ -1.15
VPS33A-201ENST00000267199 MYO15AQ9UKN7 3530 aa7.86□□□□□ -1.15
VPS33A-201ENST00000267199 REG3GQ6UW15 175 aa7.86□□□□□ -1.15
VPS33A-201ENST00000267199 SEC61GP60059 68 aa7.85□□□□□ -1.15
VPS33A-201ENST00000267199 C7orf33Q8WU49 177 aa7.85□□□□□ -1.15
VPS33A-201ENST00000267199 LRBAP50851 2863 aa7.85□□□□□ -1.15
VPS33A-201ENST00000267199 PLAC8L1A1L4L8 177 aa7.85□□□□□ -1.15
VPS33A-201ENST00000267199 C2orf48Q96LS8 159 aa7.85□□□□□ -1.15
VPS33A-201ENST00000267199 GIG44P09565 113 aaPredicted RBP7.84□□□□□ -1.15
VPS33A-201ENST00000267199 CSNK1G2-AS1Q8NCQ2 148 aa7.84□□□□□ -1.15
VPS33A-201ENST00000267199 ELOF1P60002 83 aaKnown RBP7.83□□□□□ -1.16
VPS33A-201ENST00000267199 Q9BRP9 147 aa7.83□□□□□ -1.16
VPS33A-201ENST00000267199 IGSF10Q6WRI0 2623 aa7.82□□□□□ -1.16
VPS33A-201ENST00000267199 ZZEF1O43149 2961 aa7.82□□□□□ -1.16
VPS33A-201ENST00000267199 H7BZZ5 65 aa7.81□□□□□ -1.16
VPS33A-201ENST00000267199 TEX15Q9BXT5 2789 aa7.81□□□□□ -1.16
VPS33A-201ENST00000267199 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
VPS33A-201ENST00000267199 COL12A1Q99715 3063 aa7.8□□□□□ -1.16
VPS33A-201ENST00000267199 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
VPS33A-201ENST00000267199 C19orf73Q9NVV2 129 aa7.8□□□□□ -1.16
VPS33A-201ENST00000267199 C22orf24Q9Y442 160 aa7.8□□□□□ -1.16
VPS33A-201ENST00000267199 LOC400499M0QZD8 3231 aa7.8□□□□□ -1.16
VPS33A-201ENST00000267199 M0R2N4 97 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms