RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 Q1RN00 199 aa11.92□□□□□ -0.5
SDF4-201ENST00000263741 GEMIN7Q9H840 131 aaKnown RBP11.91□□□□□ -0.5
SDF4-201ENST00000263741 NDUFA12Q9UI09 145 aa11.91□□□□□ -0.5
SDF4-201ENST00000263741 M0QXV9 152 aa11.9□□□□□ -0.5
SDF4-201ENST00000263741 SPANXDQ9BXN6 97 aa11.9□□□□□ -0.5
SDF4-201ENST00000263741 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
SDF4-201ENST00000263741 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
SDF4-201ENST00000263741 ATXN8Q156A1 80 aa11.88□□□□□ -0.51
SDF4-201ENST00000263741 FAM19A3Q7Z5A8 133 aa11.88□□□□□ -0.51
SDF4-201ENST00000263741 A0A087WZ39 114 aa11.88□□□□□ -0.51
SDF4-201ENST00000263741 H7C2G1 150 aa11.87□□□□□ -0.51
SDF4-201ENST00000263741 HERVK_113P63121 156 aa11.87□□□□□ -0.51
SDF4-201ENST00000263741 SPAG11BQ08648 103 aa11.87□□□□□ -0.51
SDF4-201ENST00000263741 KIAA1109Q2LD37 5005 aa11.87□□□□□ -0.51
SDF4-201ENST00000263741 TIMM17BO60830 172 aa11.87□□□□□ -0.51
SDF4-201ENST00000263741 HAMPP81172 84 aa11.87□□□□□ -0.51
SDF4-201ENST00000263741 ZNF561-AS1K7EIQ3 104 aa11.86□□□□□ -0.51
SDF4-201ENST00000263741 SLC25A20O43772 301 aa11.86□□□□□ -0.51
SDF4-201ENST00000263741 CNBPP62633 177 aaKnown RBP11.86□□□□□ -0.51
SDF4-201ENST00000263741 APOBP04114 4563 aaKnown RBP11.86□□□□□ -0.51
SDF4-201ENST00000263741 PRSS2P07478 247 aa11.85□□□□□ -0.51
SDF4-201ENST00000263741 LITAFQ99732 161 aa11.85□□□□□ -0.51
SDF4-201ENST00000263741 TRBV30A0A0K0K1B3 111 aa11.85□□□□□ -0.51
SDF4-201ENST00000263741 C9JAW5 83 aa11.85□□□□□ -0.51
SDF4-201ENST00000263741 SPINK8P0C7L1 97 aa11.85□□□□□ -0.51
SDF4-201ENST00000263741 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
SDF4-201ENST00000263741 IFITM1P13164 125 aa11.84□□□□□ -0.51
SDF4-201ENST00000263741 COX6CP09669 75 aa11.83□□□□□ -0.51
SDF4-201ENST00000263741 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.51
SDF4-201ENST00000263741 IGLV5-45A0A087WSX0 123 aa11.83□□□□□ -0.52
SDF4-201ENST00000263741 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.52
SDF4-201ENST00000263741 C9orf163Q8N9P6 203 aa11.83□□□□□ -0.52
SDF4-201ENST00000263741 A0A1B0GV72 72 aa11.82□□□□□ -0.52
SDF4-201ENST00000263741 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
SDF4-201ENST00000263741 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
SDF4-201ENST00000263741 NDUFA1O15239 70 aa11.82□□□□□ -0.52
SDF4-201ENST00000263741 Q6ZRU5 148 aa11.82□□□□□ -0.52
SDF4-201ENST00000263741 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
SDF4-201ENST00000263741 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
SDF4-201ENST00000263741 CAMK2N2Q96S95 79 aa11.82□□□□□ -0.52
SDF4-201ENST00000263741 CDIP1Q9H305 208 aa11.81□□□□□ -0.52
SDF4-201ENST00000263741 SMIM1B2RUZ4 78 aa11.8□□□□□ -0.52
SDF4-201ENST00000263741 SYCNQ0VAF6 134 aa11.8□□□□□ -0.52
SDF4-201ENST00000263741 KIAA0087Q14695 138 aa11.8□□□□□ -0.52
SDF4-201ENST00000263741 DNAH8Q96JB1 4490 aa11.79□□□□□ -0.52
SDF4-201ENST00000263741 TRIAP1O43715 76 aa11.79□□□□□ -0.52
SDF4-201ENST00000263741 C10orf25Q5T742 122 aa11.79□□□□□ -0.52
SDF4-201ENST00000263741 C2orf82Q6UX34 121 aa11.79□□□□□ -0.52
SDF4-201ENST00000263741 ADAMTSL4-AS1Q5T5F5 129 aa11.78□□□□□ -0.52
SDF4-201ENST00000263741 LINC01561Q8N1V8 128 aa11.78□□□□□ -0.52
SDF4-201ENST00000263741 HSPG2P98160 4391 aa11.77□□□□□ -0.52
SDF4-201ENST00000263741 TRBV10-2A0A0K0K1G8 114 aa11.77□□□□□ -0.52
SDF4-201ENST00000263741 PANO1I0J062 215 aa11.77□□□□□ -0.52
SDF4-201ENST00000263741 CHTF8P0CG12 524 aa11.77□□□□□ -0.52
SDF4-201ENST00000263741 C2orf48Q96LS8 159 aa11.77□□□□□ -0.52
SDF4-201ENST00000263741 LINC01600Q96MT4 127 aa11.77□□□□□ -0.52
SDF4-201ENST00000263741 UNQ6190/PRO20217Q6UXQ8 127 aa11.77□□□□□ -0.53
SDF4-201ENST00000263741 SDIM1Q6ZPB5 146 aa11.77□□□□□ -0.53
SDF4-201ENST00000263741 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.76□□□□□ -0.53
SDF4-201ENST00000263741 IGLV5-39A0A0G2JS06 123 aa11.75□□□□□ -0.53
SDF4-201ENST00000263741 XGP55808 180 aa11.75□□□□□ -0.53
SDF4-201ENST00000263741 Q6ZSA8 131 aa11.75□□□□□ -0.53
SDF4-201ENST00000263741 RYR1P21817 5038 aa11.75□□□□□ -0.53
SDF4-201ENST00000263741 RPL13AP40429 203 aaKnown RBP11.75□□□□□ -0.53
SDF4-201ENST00000263741 NPC2P61916 151 aa11.74□□□□□ -0.53
SDF4-201ENST00000263741 IGKV2-24A0A0C4DH68 120 aa11.74□□□□□ -0.53
SDF4-201ENST00000263741 H3BT86 120 aa11.74□□□□□ -0.53
SDF4-201ENST00000263741 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
SDF4-201ENST00000263741 Q8IZM0 81 aa11.74□□□□□ -0.53
SDF4-201ENST00000263741 C6orf48Q9UBA6 75 aa11.74□□□□□ -0.53
SDF4-201ENST00000263741 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
SDF4-201ENST00000263741 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
SDF4-201ENST00000263741 A0A096LNI7 61 aa11.72□□□□□ -0.53
SDF4-201ENST00000263741 MT-ATP8P03928 68 aa11.72□□□□□ -0.53
SDF4-201ENST00000263741 CKS1BP61024 79 aa11.72□□□□□ -0.53
SDF4-201ENST00000263741 C9orf116Q5BN46 136 aaPredicted RBP11.72□□□□□ -0.53
SDF4-201ENST00000263741 SCXQ7RTU7 201 aa11.72□□□□□ -0.53
SDF4-201ENST00000263741 HERV-K104P63124 156 aa11.71□□□□□ -0.53
SDF4-201ENST00000263741 LINC00308Q8TCZ7 52 aa11.7□□□□□ -0.54
SDF4-201ENST00000263741 KRTAP17-1Q9BYP8 105 aa11.7□□□□□ -0.54
SDF4-201ENST00000263741 LST1O00453 97 aa11.69□□□□□ -0.54
SDF4-201ENST00000263741 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
SDF4-201ENST00000263741 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
SDF4-201ENST00000263741 GAGE2BQ13066 116 aa11.68□□□□□ -0.54
SDF4-201ENST00000263741 DAND5Q8N907 189 aa11.68□□□□□ -0.54
SDF4-201ENST00000263741 CIRBP-AS1Q8TBR5 109 aa11.68□□□□□ -0.54
SDF4-201ENST00000263741 PPDPFQ9H3Y8 114 aa11.67□□□□□ -0.54
SDF4-201ENST00000263741 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
SDF4-201ENST00000263741 F8WDY8 70 aa11.67□□□□□ -0.54
SDF4-201ENST00000263741 SMR3BP02814 79 aaPredicted RBP11.67□□□□□ -0.54
SDF4-201ENST00000263741 SPACA4Q8TDM5 124 aa11.67□□□□□ -0.54
SDF4-201ENST00000263741 HERC2O95714 4834 aa11.66□□□□□ -0.54
SDF4-201ENST00000263741 CLEC2BQ92478 149 aa11.66□□□□□ -0.54
SDF4-201ENST00000263741 SNCGO76070 127 aa11.65□□□□□ -0.54
SDF4-201ENST00000263741 DPH3Q96FX2 82 aa11.65□□□□□ -0.54
SDF4-201ENST00000263741 ZNF625Q96I27 306 aaPredicted RBP11.65□□□□□ -0.54
SDF4-201ENST00000263741 CXCL5P42830 114 aa11.64□□□□□ -0.55
SDF4-201ENST00000263741 Q6ZRP5 223 aa11.64□□□□□ -0.55
SDF4-201ENST00000263741 TEX49A0A1B0GTD5 131 aa11.64□□□□□ -0.55
SDF4-201ENST00000263741 FAT1Q14517 4588 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms