RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 LITAFQ99732 161 aa7.42□□□□□ -1.22
SLC6A4-201ENST00000261707 AGRNO00468 2067 aa7.42□□□□□ -1.22
SLC6A4-201ENST00000261707 Q6ZRP5 223 aa7.42□□□□□ -1.22
SLC6A4-201ENST00000261707 GOLGB1Q14789 3259 aaKnown RBP7.42□□□□□ -1.22
SLC6A4-201ENST00000261707 MOBPQ13875 183 aa7.41□□□□□ -1.22
SLC6A4-201ENST00000261707 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
SLC6A4-201ENST00000261707 H7BZZ5 65 aa7.4□□□□□ -1.22
SLC6A4-201ENST00000261707 NBASA2RRP1 2371 aa7.4□□□□□ -1.22
SLC6A4-201ENST00000261707 WIPF1O43516 503 aa7.4□□□□□ -1.22
SLC6A4-201ENST00000261707 PRR15Q8IV56 129 aa7.39□□□□□ -1.23
SLC6A4-201ENST00000261707 LINC00167Q96N53 147 aa7.39□□□□□ -1.23
SLC6A4-201ENST00000261707 TRBV7-4A0A0J9YYF1 115 aa7.39□□□□□ -1.23
SLC6A4-201ENST00000261707 M0R2T5 61 aa7.39□□□□□ -1.23
SLC6A4-201ENST00000261707 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
SLC6A4-201ENST00000261707 UQCR11O14957 56 aa7.38□□□□□ -1.23
SLC6A4-201ENST00000261707 LINC01600Q96MT4 127 aa7.38□□□□□ -1.23
SLC6A4-201ENST00000261707 CPAMD8Q8IZJ3 1885 aa7.37□□□□□ -1.23
SLC6A4-201ENST00000261707 K7EQZ3 153 aa7.37□□□□□ -1.23
SLC6A4-201ENST00000261707 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
SLC6A4-201ENST00000261707 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
SLC6A4-201ENST00000261707 ZFHX2Q9C0A1 2572 aaPredicted RBP7.36□□□□□ -1.23
SLC6A4-201ENST00000261707 Q6ZRX8 168 aa7.36□□□□□ -1.23
SLC6A4-201ENST00000261707 RAI1Q7Z5J4 1906 aaPredicted RBP7.36□□□□□ -1.23
SLC6A4-201ENST00000261707 TET2Q6N021 2002 aaPredicted RBP7.36□□□□□ -1.23
SLC6A4-201ENST00000261707 Q96NJ1 140 aa7.35□□□□□ -1.23
SLC6A4-201ENST00000261707 SORL1Q92673 2214 aa7.35□□□□□ -1.23
SLC6A4-201ENST00000261707 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
SLC6A4-201ENST00000261707 ST20-AS1Q8NBB2 130 aa7.35□□□□□ -1.23
SLC6A4-201ENST00000261707 MUC22E2RYF6 1773 aaPredicted RBP7.34□□□□□ -1.23
SLC6A4-201ENST00000261707 SMR3BP02814 79 aaPredicted RBP7.34□□□□□ -1.24
SLC6A4-201ENST00000261707 GPR179Q6PRD1 2367 aa7.33□□□□□ -1.24
SLC6A4-201ENST00000261707 A8MWP4 228 aa7.32□□□□□ -1.24
SLC6A4-201ENST00000261707 EPM2AB3EWF7 344 aa7.32□□□□□ -1.24
SLC6A4-201ENST00000261707 NAV3Q8IVL0 2385 aa7.32□□□□□ -1.24
SLC6A4-201ENST00000261707 LINC00313P59037 77 aa7.32□□□□□ -1.24
SLC6A4-201ENST00000261707 LTBP2Q14767 1821 aa7.32□□□□□ -1.24
SLC6A4-201ENST00000261707 LRP4O75096 1905 aa7.31□□□□□ -1.24
SLC6A4-201ENST00000261707 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
SLC6A4-201ENST00000261707 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
SLC6A4-201ENST00000261707 ADAMTS20P59510 1910 aa7.29□□□□□ -1.24
SLC6A4-201ENST00000261707 PHF5AQ7RTV0 110 aaKnown RBP7.29□□□□□ -1.24
SLC6A4-201ENST00000261707 CDC42SE1Q9NRR8 79 aa7.28□□□□□ -1.24
SLC6A4-201ENST00000261707 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
SLC6A4-201ENST00000261707 PTPN13Q12923 2485 aa7.28□□□□□ -1.24
SLC6A4-201ENST00000261707 WNK1Q9H4A3 2382 aa7.28□□□□□ -1.24
SLC6A4-201ENST00000261707 MUC4Q99102 2169 aa7.27□□□□□ -1.25
SLC6A4-201ENST00000261707 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
SLC6A4-201ENST00000261707 C9orf92A6NGG3 77 aa7.25□□□□□ -1.25
SLC6A4-201ENST00000261707 EIF4EBP3O60516 100 aaPredicted RBP7.24□□□□□ -1.25
SLC6A4-201ENST00000261707 H3BS24 57 aa7.23□□□□□ -1.25
SLC6A4-201ENST00000261707 LINC00304Q8N9R0 145 aa7.23□□□□□ -1.25
SLC6A4-201ENST00000261707 Q1T7F1 81 aa7.23□□□□□ -1.25
SLC6A4-201ENST00000261707 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
SLC6A4-201ENST00000261707 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
SLC6A4-201ENST00000261707 APLNQ9ULZ1 77 aa7.22□□□□□ -1.25
SLC6A4-201ENST00000261707 SONP18583 2426 aaKnown RBP7.21□□□□□ -1.26
SLC6A4-201ENST00000261707 C9orf129Q5T035 196 aaKnown RBP7.19□□□□□ -1.26
SLC6A4-201ENST00000261707 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
SLC6A4-201ENST00000261707 UTRNP46939 3433 aa7.19□□□□□ -1.26
SLC6A4-201ENST00000261707 HIVEP3Q5T1R4 2406 aa7.19□□□□□ -1.26
SLC6A4-201ENST00000261707 PCNTO95613 3336 aa7.19□□□□□ -1.26
SLC6A4-201ENST00000261707 IGFL1Q6UW32 110 aa7.18□□□□□ -1.26
SLC6A4-201ENST00000261707 Q5XG85 94 aa7.18□□□□□ -1.26
SLC6A4-201ENST00000261707 C8orf17Q9NRJ1 99 aa7.18□□□□□ -1.26
SLC6A4-201ENST00000261707 LINC00528Q8N1L1 170 aa7.18□□□□□ -1.26
SLC6A4-201ENST00000261707 LINC01554Q52M75 96 aa7.17□□□□□ -1.26
SLC6A4-201ENST00000261707 CSPG4Q6UVK1 2322 aa7.17□□□□□ -1.26
SLC6A4-201ENST00000261707 PTPRBP23467 1997 aa7.17□□□□□ -1.26
SLC6A4-201ENST00000261707 LINC00588Q9Y4M8 146 aa7.17□□□□□ -1.26
SLC6A4-201ENST00000261707 FAM168BA1KXE4 195 aa7.16□□□□□ -1.26
SLC6A4-201ENST00000261707 C10orf142B7Z368 130 aa7.16□□□□□ -1.26
SLC6A4-201ENST00000261707 A0A1W2PPR1 153 aa7.16□□□□□ -1.26
SLC6A4-201ENST00000261707 KCNQ1DNQ9H478 68 aa7.15□□□□□ -1.26
SLC6A4-201ENST00000261707 NOTCH2Q04721 2471 aa7.15□□□□□ -1.26
SLC6A4-201ENST00000261707 ANKHD1Q8IWZ3 2542 aaKnown RBP7.15□□□□□ -1.26
SLC6A4-201ENST00000261707 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.26
SLC6A4-201ENST00000261707 ABCA2Q9BZC7 2435 aa7.14□□□□□ -1.27
SLC6A4-201ENST00000261707 H3BNG1 76 aa7.14□□□□□ -1.27
SLC6A4-201ENST00000261707 Q8N377 158 aa7.13□□□□□ -1.27
SLC6A4-201ENST00000261707 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
SLC6A4-201ENST00000261707 DSCR10P59022 87 aa7.12□□□□□ -1.27
SLC6A4-201ENST00000261707 K7EIL1 84 aa7.12□□□□□ -1.27
SLC6A4-201ENST00000261707 C2CD3Q4AC94 2353 aa7.11□□□□□ -1.27
SLC6A4-201ENST00000261707 CCDC168Q8NDH2 2452 aa7.11□□□□□ -1.27
SLC6A4-201ENST00000261707 Q6ZSA8 131 aa7.11□□□□□ -1.27
SLC6A4-201ENST00000261707 CUL9Q8IWT3 2517 aa7.1□□□□□ -1.27
SLC6A4-201ENST00000261707 Q75L30 129 aa7.09□□□□□ -1.27
SLC6A4-201ENST00000261707 OBSCN-AS1Q96MR7 158 aa7.09□□□□□ -1.27
SLC6A4-201ENST00000261707 FAM229BQ4G0N7 80 aa7.09□□□□□ -1.27
SLC6A4-201ENST00000261707 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
SLC6A4-201ENST00000261707 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
SLC6A4-201ENST00000261707 SPG11Q96JI7 2443 aa7.08□□□□□ -1.28
SLC6A4-201ENST00000261707 DNAH10OSP0CZ25 163 aa7.08□□□□□ -1.28
SLC6A4-201ENST00000261707 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
SLC6A4-201ENST00000261707 DOPEY1Q5JWR5 2465 aa7.07□□□□□ -1.28
SLC6A4-201ENST00000261707 FAM104AQ969W3 186 aa7.07□□□□□ -1.28
SLC6A4-201ENST00000261707 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
SLC6A4-201ENST00000261707 LUZP6Q538Z0 58 aa7.04□□□□□ -1.28
SLC6A4-201ENST00000261707 CSNK1G2-AS1Q8NCQ2 148 aa7.04□□□□□ -1.28
SLC6A4-201ENST00000261707 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms