RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SNCGO76070 127 aa6.14□□□□□ -1.43
CKAP2-201ENST00000258607 IFITM1P13164 125 aa6.14□□□□□ -1.43
CKAP2-201ENST00000258607 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
CKAP2-201ENST00000258607 TRBV30A0A0K0K1B3 111 aa6.13□□□□□ -1.43
CKAP2-201ENST00000258607 FAM19A5Q7Z5A7 132 aaPredicted RBP6.13□□□□□ -1.43
CKAP2-201ENST00000258607 A0A096LNI7 61 aa6.12□□□□□ -1.43
CKAP2-201ENST00000258607 TRAV13-2A0A0B4J235 113 aa6.12□□□□□ -1.43
CKAP2-201ENST00000258607 LST1O00453 97 aa6.12□□□□□ -1.43
CKAP2-201ENST00000258607 FAM168BA1KXE4 195 aa6.12□□□□□ -1.43
CKAP2-201ENST00000258607 IBA57-AS1B1ANH7 110 aa6.12□□□□□ -1.43
CKAP2-201ENST00000258607 TRBV10-3A0A0K0K1G6 114 aa6.11□□□□□ -1.43
CKAP2-201ENST00000258607 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
CKAP2-201ENST00000258607 SCXQ7RTU7 201 aa6.11□□□□□ -1.43
CKAP2-201ENST00000258607 MEGF8Q7Z7M0 2845 aa6.11□□□□□ -1.43
CKAP2-201ENST00000258607 A0A1B0GUV1 79 aa6.1□□□□□ -1.43
CKAP2-201ENST00000258607 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
CKAP2-201ENST00000258607 C3orf22Q8N5N4 141 aa6.1□□□□□ -1.43
CKAP2-201ENST00000258607 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
CKAP2-201ENST00000258607 KIAA0087Q14695 138 aa6.1□□□□□ -1.43
CKAP2-201ENST00000258607 Q8IZM0 81 aa6.1□□□□□ -1.43
CKAP2-201ENST00000258607 LINC00588Q9Y4M8 146 aa6.1□□□□□ -1.43
CKAP2-201ENST00000258607 Q6ZQY7 126 aa6.09□□□□□ -1.43
CKAP2-201ENST00000258607 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.43
CKAP2-201ENST00000258607 A0A0G2JQZ4 141 aa6.09□□□□□ -1.44
CKAP2-201ENST00000258607 A0A1W2PNN7 141 aa6.09□□□□□ -1.44
CKAP2-201ENST00000258607 SDIM1Q6ZPB5 146 aa6.08□□□□□ -1.44
CKAP2-201ENST00000258607 COPS9Q8WXC6 57 aa6.08□□□□□ -1.44
CKAP2-201ENST00000258607 SPATA25Q9BR10 227 aa6.08□□□□□ -1.44
CKAP2-201ENST00000258607 KLK5Q9Y337 293 aaPredicted RBP6.08□□□□□ -1.44
CKAP2-201ENST00000258607 HAMPP81172 84 aa6.08□□□□□ -1.44
CKAP2-201ENST00000258607 CHTF8P0CG12 524 aa6.07□□□□□ -1.44
CKAP2-201ENST00000258607 NKAPP1Q8N9T2 125 aa6.07□□□□□ -1.44
CKAP2-201ENST00000258607 A0A087WVE0 104 aa6.07□□□□□ -1.44
CKAP2-201ENST00000258607 USP17L23D6RBM5 183 aa6.07□□□□□ -1.44
CKAP2-201ENST00000258607 CXCL5P42830 114 aa6.07□□□□□ -1.44
CKAP2-201ENST00000258607 DNHD1Q96M86 4753 aa6.07□□□□□ -1.44
CKAP2-201ENST00000258607 TIMM17BO60830 172 aa6.06□□□□□ -1.44
CKAP2-201ENST00000258607 DNAH10OSP0CZ25 163 aa6.06□□□□□ -1.44
CKAP2-201ENST00000258607 Q6ZRP5 223 aa6.06□□□□□ -1.44
CKAP2-201ENST00000258607 ANAPC13Q9BS18 74 aa6.06□□□□□ -1.44
CKAP2-201ENST00000258607 FBN3Q75N90 2809 aa6.06□□□□□ -1.44
CKAP2-201ENST00000258607 SYCNQ0VAF6 134 aa6.06□□□□□ -1.44
CKAP2-201ENST00000258607 TMEM126AQ9H061 195 aa6.05□□□□□ -1.44
CKAP2-201ENST00000258607 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
CKAP2-201ENST00000258607 TRAV10A0A0B4J240 114 aa6.04□□□□□ -1.44
CKAP2-201ENST00000258607 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.04□□□□□ -1.44
CKAP2-201ENST00000258607 ORMDL1Q9P0S3 153 aa6.04□□□□□ -1.44
CKAP2-201ENST00000258607 DNAH10Q8IVF4 4471 aa6.03□□□□□ -1.44
CKAP2-201ENST00000258607 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
CKAP2-201ENST00000258607 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
CKAP2-201ENST00000258607 HIGD2AQ9BW72 106 aa6.03□□□□□ -1.44
CKAP2-201ENST00000258607 UBE2BP63146 152 aa6.03□□□□□ -1.44
CKAP2-201ENST00000258607 C3orf84H3BNL1 204 aa6.02□□□□□ -1.45
CKAP2-201ENST00000258607 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
CKAP2-201ENST00000258607 FAM236AA0A1B0GUQ0 79 aa6.02□□□□□ -1.45
CKAP2-201ENST00000258607 FAM236BA0A1B0GV22 79 aa6.02□□□□□ -1.45
CKAP2-201ENST00000258607 H3BT86 120 aa6.01□□□□□ -1.45
CKAP2-201ENST00000258607 RPL28P46779 137 aaKnown RBP6.01□□□□□ -1.45
CKAP2-201ENST00000258607 TRAV23DV6A0A075B6W5 121 aa6.01□□□□□ -1.45
CKAP2-201ENST00000258607 SMCR5Q8TEV8 140 aa6.01□□□□□ -1.45
CKAP2-201ENST00000258607 B5MCH6 92 aa6.01□□□□□ -1.45
CKAP2-201ENST00000258607 hADV29S1A0JD25 119 aa6□□□□□ -1.45
CKAP2-201ENST00000258607 PRLHP81277 87 aa6□□□□□ -1.45
CKAP2-201ENST00000258607 EGFEM1PQ0D2K5 195 aa6□□□□□ -1.45
CKAP2-201ENST00000258607 SCGB1A1P11684 91 aa6□□□□□ -1.45
CKAP2-201ENST00000258607 DIRC1Q969H9 104 aa6□□□□□ -1.45
CKAP2-201ENST00000258607 ZNF73O43830 326 aaPredicted RBP6□□□□□ -1.45
CKAP2-201ENST00000258607 Q8N9L7 120 aa6□□□□□ -1.45
CKAP2-201ENST00000258607 LINC00846Q9NV44 126 aa6□□□□□ -1.45
CKAP2-201ENST00000258607 DEFB116Q30KQ4 102 aa5.99□□□□□ -1.45
CKAP2-201ENST00000258607 Q8N814 137 aa5.99□□□□□ -1.45
CKAP2-201ENST00000258607 PRR34Q9NV39 138 aa5.99□□□□□ -1.45
CKAP2-201ENST00000258607 ST20-AS1Q8NBB2 130 aa5.98□□□□□ -1.45
CKAP2-201ENST00000258607 LY6G6CO95867 125 aa5.98□□□□□ -1.45
CKAP2-201ENST00000258607 H0YGX0 51 aa5.98□□□□□ -1.45
CKAP2-201ENST00000258607 NDUFC2-KCTD14E9PQ53 114 aa5.97□□□□□ -1.45
CKAP2-201ENST00000258607 TRACP01848 142 aa5.97□□□□□ -1.45
CKAP2-201ENST00000258607 COX7BP24311 80 aa5.97□□□□□ -1.45
CKAP2-201ENST00000258607 SS18L2Q9UHA2 77 aa5.97□□□□□ -1.45
CKAP2-201ENST00000258607 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
CKAP2-201ENST00000258607 LINC01556Q5JQF7 62 aa5.96□□□□□ -1.46
CKAP2-201ENST00000258607 FAM19A3Q7Z5A8 133 aa5.96□□□□□ -1.46
CKAP2-201ENST00000258607 ETDCA0A1B0GVM5 59 aa5.96□□□□□ -1.46
CKAP2-201ENST00000258607 C7orf33Q8WU49 177 aa5.96□□□□□ -1.46
CKAP2-201ENST00000258607 FAM19A1Q7Z5A9 133 aa5.95□□□□□ -1.46
CKAP2-201ENST00000258607 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
CKAP2-201ENST00000258607 HUWE1Q7Z6Z7 4374 aaKnown RBP5.95□□□□□ -1.46
CKAP2-201ENST00000258607 DSCR8Q96T75 97 aa5.94□□□□□ -1.46
CKAP2-201ENST00000258607 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
CKAP2-201ENST00000258607 INAFM2P0DMQ5 153 aa5.94□□□□□ -1.46
CKAP2-201ENST00000258607 RBM3P98179 157 aaKnown RBP5.94□□□□□ -1.46
CKAP2-201ENST00000258607 TM2D3Q9BRN9 247 aa5.94□□□□□ -1.46
CKAP2-201ENST00000258607 HRCT1Q6UXD1 115 aa5.93□□□□□ -1.46
CKAP2-201ENST00000258607 LRCOL1A6NCL2 159 aa5.93□□□□□ -1.46
CKAP2-201ENST00000258607 VPREB1P12018 145 aa5.93□□□□□ -1.46
CKAP2-201ENST00000258607 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
CKAP2-201ENST00000258607 PHF5AQ7RTV0 110 aaKnown RBP5.93□□□□□ -1.46
CKAP2-201ENST00000258607 CMYA5Q8N3K9 4069 aa5.93□□□□□ -1.46
CKAP2-201ENST00000258607 LINC00167Q96N53 147 aa5.92□□□□□ -1.46
CKAP2-201ENST00000258607 WIPF1O43516 503 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms