RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
TROAP-201ENST00000257909 C19orf73Q9NVV2 129 aa7.82□□□□□ -1.16
TROAP-201ENST00000257909 LINC00612Q8N6U2 182 aa7.82□□□□□ -1.16
TROAP-201ENST00000257909 NREPQ16612 68 aa7.81□□□□□ -1.16
TROAP-201ENST00000257909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.81□□□□□ -1.16
TROAP-201ENST00000257909 PRO0255Q9UI72 69 aa7.81□□□□□ -1.16
TROAP-201ENST00000257909 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
TROAP-201ENST00000257909 REG3AQ06141 175 aa7.8□□□□□ -1.16
TROAP-201ENST00000257909 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
TROAP-201ENST00000257909 DIRC1Q969H9 104 aa7.8□□□□□ -1.16
TROAP-201ENST00000257909 SETXQ7Z333 2677 aaKnown RBP7.8□□□□□ -1.16
TROAP-201ENST00000257909 NIPBLQ6KC79 2804 aaeCLIP7.79□□□□□ -1.16
TROAP-201ENST00000257909 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 A0A0J9YWU9 116 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 BPY2O14599 106 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 IGLV1-51P01701 117 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 ANGP03950 147 aaKnown RBP7.79□□□□□ -1.16
TROAP-201ENST00000257909 IGHV4-30-4P0DP06 118 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 LINC01006Q8NI28 216 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 ACACBO00763 2458 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 PTPN13Q12923 2485 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 EPG5Q9HCE0 2579 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 KRTAP10-9P60411 292 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 SCXQ7RTU7 201 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 NF1P21359 2839 aa7.79□□□□□ -1.16
TROAP-201ENST00000257909 FAM208BQ5VWN6 2430 aa7.78□□□□□ -1.16
TROAP-201ENST00000257909 TLN2Q9Y4G6 2542 aa7.78□□□□□ -1.16
TROAP-201ENST00000257909 LINC00474Q9P2X8 69 aa7.78□□□□□ -1.16
TROAP-201ENST00000257909 ABCA12Q86UK0 2595 aa7.78□□□□□ -1.16
TROAP-201ENST00000257909 A0A096LPF7 62 aa7.78□□□□□ -1.16
TROAP-201ENST00000257909 SPAG11BQ08648 103 aa7.78□□□□□ -1.16
TROAP-201ENST00000257909 UNQ6190/PRO20217Q6UXQ8 127 aa7.78□□□□□ -1.16
TROAP-201ENST00000257909 LRRK2Q5S007 2527 aa7.77□□□□□ -1.16
TROAP-201ENST00000257909 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
TROAP-201ENST00000257909 BBC3Q96PG8 261 aaPredicted RBP7.77□□□□□ -1.17
TROAP-201ENST00000257909 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
TROAP-201ENST00000257909 CACNA1AO00555 2505 aa7.77□□□□□ -1.17
TROAP-201ENST00000257909 COX7BP24311 80 aa7.76□□□□□ -1.17
TROAP-201ENST00000257909 CYSRT1A8MQ03 144 aa7.75□□□□□ -1.17
TROAP-201ENST00000257909 ZNF73O43830 326 aaPredicted RBP7.75□□□□□ -1.17
TROAP-201ENST00000257909 SONP18583 2426 aaKnown RBP7.75□□□□□ -1.17
TROAP-201ENST00000257909 GVQW2A0A096LPI5 108 aaPredicted RBP7.75□□□□□ -1.17
TROAP-201ENST00000257909 ELOF1P60002 83 aaKnown RBP7.75□□□□□ -1.17
TROAP-201ENST00000257909 ZFYVE26Q68DK2 2539 aa7.74□□□□□ -1.17
TROAP-201ENST00000257909 DNAJC9-AS1A6NH13 148 aa7.74□□□□□ -1.17
TROAP-201ENST00000257909 PRYO14603 147 aa7.74□□□□□ -1.17
TROAP-201ENST00000257909 NAV2Q8IVL1 2488 aa7.73□□□□□ -1.17
TROAP-201ENST00000257909 PRB1P04280 392 aa7.72□□□□□ -1.17
TROAP-201ENST00000257909 OCR1Q9BZK8 76 aa7.72□□□□□ -1.17
TROAP-201ENST00000257909 IGKV4-1P06312 121 aa7.72□□□□□ -1.17
TROAP-201ENST00000257909 ZNF462Q96JM2 2506 aa7.72□□□□□ -1.17
TROAP-201ENST00000257909 UBR5O95071 2799 aaPredicted RBP7.71□□□□□ -1.17
TROAP-201ENST00000257909 ITPR3Q14573 2671 aa7.71□□□□□ -1.17
TROAP-201ENST00000257909 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.18
TROAP-201ENST00000257909 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
TROAP-201ENST00000257909 LYRM9A8MSI8 78 aa7.71□□□□□ -1.18
TROAP-201ENST00000257909 ESRGQ1W209 222 aa7.71□□□□□ -1.18
TROAP-201ENST00000257909 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
TROAP-201ENST00000257909 X6R8D5 127 aa7.71□□□□□ -1.18
TROAP-201ENST00000257909 APCP25054 2843 aa7.7□□□□□ -1.18
TROAP-201ENST00000257909 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
TROAP-201ENST00000257909 ANK3Q12955 4377 aaKnown RBP7.69□□□□□ -1.18
TROAP-201ENST00000257909 MPLKIPQ8TAP9 179 aa7.69□□□□□ -1.18
TROAP-201ENST00000257909 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
TROAP-201ENST00000257909 C6orf48Q9UBA6 75 aa7.69□□□□□ -1.18
TROAP-201ENST00000257909 CELA1Q9UNI1 258 aa7.69□□□□□ -1.18
TROAP-201ENST00000257909 SETD2Q9BYW2 2564 aaPredicted RBP7.69□□□□□ -1.18
TROAP-201ENST00000257909 DEFB113Q30KQ7 82 aa7.68□□□□□ -1.18
TROAP-201ENST00000257909 Q6ZTC4 211 aa7.68□□□□□ -1.18
TROAP-201ENST00000257909 Q8N9L7 120 aa7.68□□□□□ -1.18
TROAP-201ENST00000257909 ESM1Q9NQ30 184 aa7.68□□□□□ -1.18
TROAP-201ENST00000257909 USP24Q9UPU5 2620 aa7.68□□□□□ -1.18
TROAP-201ENST00000257909 HIGD2BQ4VC39 106 aa7.68□□□□□ -1.18
TROAP-201ENST00000257909 PRR34Q9NV39 138 aa7.68□□□□□ -1.18
TROAP-201ENST00000257909 LINC00528Q8N1L1 170 aa7.67□□□□□ -1.18
TROAP-201ENST00000257909 M0R378 163 aa7.67□□□□□ -1.18
TROAP-201ENST00000257909 VPREB1P12018 145 aa7.66□□□□□ -1.18
TROAP-201ENST00000257909 LELP1Q5T871 98 aa7.66□□□□□ -1.18
TROAP-201ENST00000257909 PMAIP1Q13794 54 aa7.66□□□□□ -1.18
TROAP-201ENST00000257909 HIGD2AQ9BW72 106 aa7.65□□□□□ -1.18
TROAP-201ENST00000257909 FLNAP21333 2647 aaKnown RBP7.65□□□□□ -1.19
TROAP-201ENST00000257909 KLK12Q9UKR0 248 aa7.64□□□□□ -1.19
TROAP-201ENST00000257909 FN1P02751 2386 aaKnown RBP7.64□□□□□ -1.19
TROAP-201ENST00000257909 DAD1P61803 113 aa7.63□□□□□ -1.19
TROAP-201ENST00000257909 CCDC168Q8NDH2 2452 aa7.63□□□□□ -1.19
TROAP-201ENST00000257909 A0A1B0GW54 56 aa7.62□□□□□ -1.19
TROAP-201ENST00000257909 RETNQ9HD89 108 aa7.62□□□□□ -1.19
TROAP-201ENST00000257909 C3orf84H3BNL1 204 aa7.61□□□□□ -1.19
TROAP-201ENST00000257909 EGFEM1PQ0D2K5 195 aa7.61□□□□□ -1.19
TROAP-201ENST00000257909 CAMK2N2Q96S95 79 aa7.61□□□□□ -1.19
TROAP-201ENST00000257909 LCE6AA0A183 80 aa7.6□□□□□ -1.19
TROAP-201ENST00000257909 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
TROAP-201ENST00000257909 CD164Q04900 197 aa7.6□□□□□ -1.19
TROAP-201ENST00000257909 PRR15Q8IV56 129 aa7.6□□□□□ -1.19
TROAP-201ENST00000257909 IGLV5-48A0A075B6I7 105 aa7.59□□□□□ -1.19
TROAP-201ENST00000257909 DEFB4AO15263 64 aa7.59□□□□□ -1.19
TROAP-201ENST00000257909 SMIM29Q86T20 159 aa7.59□□□□□ -1.19
TROAP-201ENST00000257909 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
TROAP-201ENST00000257909 GCN1Q92616 2671 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms