RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 MUC4Q99102 2169 aa8.69□□□□□ -1.02
TSPAN9-201ENST00000011898 Q8N2B8 174 aa8.69□□□□□ -1.02
TSPAN9-201ENST00000011898 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
TSPAN9-201ENST00000011898 LINC01006Q8NI28 216 aa8.69□□□□□ -1.02
TSPAN9-201ENST00000011898 LINC00315P59091 139 aa8.68□□□□□ -1.02
TSPAN9-201ENST00000011898 SMCR5Q8TEV8 140 aa8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 AMELXQ99217 191 aa8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 COL12A1Q99715 3063 aa8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 CHCHD7Q9BUK0 85 aa8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 CDC42SE2Q9NRR3 84 aa8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 LINC00474Q9P2X8 69 aa8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 H0Y9J4 135 aa8.67□□□□□ -1.02
TSPAN9-201ENST00000011898 Q6ZVQ6 151 aa8.66□□□□□ -1.02
TSPAN9-201ENST00000011898 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
TSPAN9-201ENST00000011898 REG3AQ06141 175 aa8.66□□□□□ -1.02
TSPAN9-201ENST00000011898 Q6ZSN1 163 aa8.66□□□□□ -1.02
TSPAN9-201ENST00000011898 RELNP78509 3460 aa8.66□□□□□ -1.02
TSPAN9-201ENST00000011898 LINC01561Q8N1V8 128 aa8.66□□□□□ -1.02
TSPAN9-201ENST00000011898 Q8N814 137 aa8.66□□□□□ -1.02
TSPAN9-201ENST00000011898 WIPF1O43516 503 aa8.65□□□□□ -1.02
TSPAN9-201ENST00000011898 FSHBP01225 129 aa8.65□□□□□ -1.02
TSPAN9-201ENST00000011898 LINC01547P58512 204 aaPredicted RBP8.65□□□□□ -1.02
TSPAN9-201ENST00000011898 HRNRQ86YZ3 2850 aaPredicted RBP8.65□□□□□ -1.02
TSPAN9-201ENST00000011898 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
TSPAN9-201ENST00000011898 LINC00482Q8N8I6 264 aa8.65□□□□□ -1.02
TSPAN9-201ENST00000011898 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.02
TSPAN9-201ENST00000011898 IGKV4-1P06312 121 aa8.65□□□□□ -1.03
TSPAN9-201ENST00000011898 COX6A2Q02221 97 aa8.64□□□□□ -1.03
TSPAN9-201ENST00000011898 LINC00208Q96KT6 92 aa8.64□□□□□ -1.03
TSPAN9-201ENST00000011898 BEAN1Q3B7T3 259 aa8.63□□□□□ -1.03
TSPAN9-201ENST00000011898 LINC00337Q8N6G1 96 aa8.63□□□□□ -1.03
TSPAN9-201ENST00000011898 CR1P17927 2039 aa8.63□□□□□ -1.03
TSPAN9-201ENST00000011898 Q8N9L7 120 aa8.63□□□□□ -1.03
TSPAN9-201ENST00000011898 OXLD1Q5BKU9 147 aa8.62□□□□□ -1.03
TSPAN9-201ENST00000011898 FAM218AQ96MZ4 157 aa8.62□□□□□ -1.03
TSPAN9-201ENST00000011898 UNC79Q9P2D8 2635 aa8.62□□□□□ -1.03
TSPAN9-201ENST00000011898 GCN1Q92616 2671 aaKnown RBP8.62□□□□□ -1.03
TSPAN9-201ENST00000011898 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
TSPAN9-201ENST00000011898 C2orf48Q96LS8 159 aa8.62□□□□□ -1.03
TSPAN9-201ENST00000011898 SMG1Q96Q15 3661 aaKnown RBP8.62□□□□□ -1.03
TSPAN9-201ENST00000011898 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
TSPAN9-201ENST00000011898 TRBV10-3A0A0K0K1G6 114 aa8.6□□□□□ -1.03
TSPAN9-201ENST00000011898 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
TSPAN9-201ENST00000011898 LRBAP50851 2863 aa8.59□□□□□ -1.03
TSPAN9-201ENST00000011898 KRTAP1-1Q07627 177 aa8.59□□□□□ -1.03
TSPAN9-201ENST00000011898 Q9UF83 564 aa8.58□□□□□ -1.04
TSPAN9-201ENST00000011898 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
TSPAN9-201ENST00000011898 TENM4Q6N022 2769 aa8.58□□□□□ -1.04
TSPAN9-201ENST00000011898 A0A096LNI7 61 aa8.58□□□□□ -1.04
TSPAN9-201ENST00000011898 COL6A5A8TX70 2615 aa8.58□□□□□ -1.04
TSPAN9-201ENST00000011898 IGLV4-60A0A075B6I1 120 aa8.57□□□□□ -1.04
TSPAN9-201ENST00000011898 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
TSPAN9-201ENST00000011898 KLK9Q2XQG4 91 aa8.57□□□□□ -1.04
TSPAN9-201ENST00000011898 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
TSPAN9-201ENST00000011898 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
TSPAN9-201ENST00000011898 NOTCH1P46531 2555 aa8.57□□□□□ -1.04
TSPAN9-201ENST00000011898 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
TSPAN9-201ENST00000011898 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
TSPAN9-201ENST00000011898 A8MTW9 85 aa8.56□□□□□ -1.04
TSPAN9-201ENST00000011898 IGLV1-51P01701 117 aa8.55□□□□□ -1.04
TSPAN9-201ENST00000011898 CD164Q04900 197 aa8.55□□□□□ -1.04
TSPAN9-201ENST00000011898 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
TSPAN9-201ENST00000011898 LINC00575Q6W349 94 aa8.54□□□□□ -1.04
TSPAN9-201ENST00000011898 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.54□□□□□ -1.04
TSPAN9-201ENST00000011898 APCP25054 2843 aa8.54□□□□□ -1.04
TSPAN9-201ENST00000011898 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
TSPAN9-201ENST00000011898 C9orf116Q5BN46 136 aaPredicted RBP8.53□□□□□ -1.04
TSPAN9-201ENST00000011898 TEX15Q9BXT5 2789 aa8.53□□□□□ -1.04
TSPAN9-201ENST00000011898 ZNF73O43830 326 aaPredicted RBP8.53□□□□□ -1.04
TSPAN9-201ENST00000011898 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
TSPAN9-201ENST00000011898 Q8IZM0 81 aa8.52□□□□□ -1.05
TSPAN9-201ENST00000011898 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
TSPAN9-201ENST00000011898 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
TSPAN9-201ENST00000011898 BCE1O60756 84 aa8.51□□□□□ -1.05
TSPAN9-201ENST00000011898 CXCL6P80162 114 aa8.51□□□□□ -1.05
TSPAN9-201ENST00000011898 DCHS2Q6V1P9 2916 aa8.5□□□□□ -1.05
TSPAN9-201ENST00000011898 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
TSPAN9-201ENST00000011898 A8MUN3 132 aa8.49□□□□□ -1.05
TSPAN9-201ENST00000011898 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
TSPAN9-201ENST00000011898 H7BZZ5 65 aa8.49□□□□□ -1.05
TSPAN9-201ENST00000011898 FBN2P35556 2912 aa8.49□□□□□ -1.05
TSPAN9-201ENST00000011898 C16orf95Q9H693 158 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 LELP1Q5T871 98 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 CRYBG3Q68DQ2 2970 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 IGHV4-30-4P0DP06 118 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 C11orf45Q8TAV5 145 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 B9D2Q9BPU9 175 aa8.48□□□□□ -1.05
TSPAN9-201ENST00000011898 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
TSPAN9-201ENST00000011898 CYSRT1A8MQ03 144 aa8.47□□□□□ -1.05
TSPAN9-201ENST00000011898 ZFHX3Q15911 3703 aa8.47□□□□□ -1.05
TSPAN9-201ENST00000011898 HCG22E2RYF7 251 aa8.47□□□□□ -1.05
TSPAN9-201ENST00000011898 PCOTHQ58A44 107 aa8.47□□□□□ -1.05
TSPAN9-201ENST00000011898 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
TSPAN9-201ENST00000011898 ITPR2Q14571 2701 aa8.46□□□□□ -1.05
TSPAN9-201ENST00000011898 COX17Q14061 63 aa8.46□□□□□ -1.05
TSPAN9-201ENST00000011898 DEFB131BA0A096LNP1 70 aa8.46□□□□□ -1.06
TSPAN9-201ENST00000011898 SMIM29Q86T20 159 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms