RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Tff3Q62395 81 aa10.06□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Mrps18cQ8R2L5 143 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Olfr470Q8VF65 314 aa10.06□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 4930412O13RikQ9D5M9 106 aa10.06□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 1110002E22RikE0CYV9 1786 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Arhgef17Q80U35 2057 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm21775J3KMK6 180 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Cnih1O35372 144 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 CrxO54751 299 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 P03980 138 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Dmrtc2Q8CGW9 370 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Vstm5Q9D806 199 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Awat1A2ADU9 328 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm21370Q3T9V6 190 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Nabp2Q8R2Y9 212 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 ArtnQ9Z0L2 224 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Wdfy3Q6VNB8 3508 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm29289A0A087WPY7 166 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm4064A0A087WR82 380 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Scgb1b24B1B0N6 92 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm10352B2RWR6 380 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm21693J3QK27 380 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 F2rl2O08675 369 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Rbmy1a1O35698 380 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 P18529 117 aa10.05□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm20379A0A087WR34 119 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Tcf20Q9EPQ8 1987 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Igkv6-25A0A140T8N7 115 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Esp23A8R0V5 104 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Col6a3E9PWQ3 3284 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Ncoa6Q9JL19 2067 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Cd27P41272 250 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Fabp6P51162 128 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Ly6g6dQ9Z1Q3 135 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Slc25a20Q9Z2Z6 301 aaKnown RBP10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Vmn1r61W4VSP5 300 aa10.04□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 PtprbB2RU80 1998 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm26965M0QWH4 86 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 F930015N05RikQ8C3A3 210 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 CtrlQ9ER05 264 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gm45785A0A1B0GT05 94 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Bet1lO35153 111 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Q6DIA7 600 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Tspan2Q922J6 221 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Ifitm2Q99J93 144 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Necap2Q9D1J1 266 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Dkk2Q9QYZ8 259 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Tcrg-C2A0A075B5Z2 167 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 P01853 167 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Cox8bP48772 70 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Mex3bQ69Z36 601 aaKnown RBP10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Gnb1lQ9EQ15 326 aa10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Dnajb12Q9QYI4 376 aaKnown RBP10.03□□□□□ -0.8
Pcdh1-202ENSMUST00000159405 Olfr1337A2ACY8 315 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tac3P55099 116 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gfra1P97785 468 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Vmn1r179Q8R2B4 323 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr975Q8VG91 310 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem189Q99LQ7 271 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Q9CQM1 111 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Fam241bQ9D882 120 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem160Q9D938 188 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Nat6Q9R123 314 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Brca2P97929 3329 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm20517G3UVU6 152 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 P01793 123 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gpbar1Q80SS6 329 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr365Q8VFT2 312 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Sorl1O88307 2215 aaKnown RBP10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Esp38A8R0X1 80 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 P01792 123 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 TgfaP48030 159 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Fxyd7P59648 80 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr25Q7TRD6 313 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm9945Q8BNZ3 91 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Zmat4Q8BZ94 229 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm5468Q8C3D3 155 aa10.02□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Trav14-3A0A075B607 120 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Omt2bD3YX29 119 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr1185-ps1F6XP16 303 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Col8a1Q00780 744 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ssbp4Q3U4B1 363 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr761Q7TRJ0 323 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Muc15Q8C6Z1 331 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem129Q8K304 362 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 UrahQ9CRB3 118 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Rbmxl2Q9DAE2 385 aaKnown RBP10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 1700008P02RikQ9DAJ8 175 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Npc2Q9Z0J0 149 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Tmem141A2AJB2 108 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 ErhP84089 104 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gm4792Q569Q2 183 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Spem1Q5F289 310 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Q8VC23 124 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Olfr127Q8VF25 323 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Gatad1Q920S3 266 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Ormdl3Q9CPZ6 153 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 H2afb1Q9CQ70 111 aa10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 Usp9xP70398 2559 aaKnown RBP10.01□□□□□ -0.81
Pcdh1-202ENSMUST00000159405 SetxA2AKX3 2646 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms