RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm4894Q8CA09 118 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Olfr810Q8VFH9 312 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Ube2v1Q9CZY3 147 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Olfr761Q7TRJ0 323 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Fhl3Q9R059 289 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Adrb3P25962 400 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Znf787Q8BIF9 381 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Snx22Q8C084 192 aa12.72□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 P01788 123 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 GchfrP99025 84 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Rnf151Q9CQ29 239 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Tmem50aQ9CXL1 157 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 LenepQ9WVB6 61 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Med12A2AGH6 2190 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Tm4sf19E9Q9H8 206 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 3110021N24RikJ3QMN2 152 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Prdm6Q3UZD5 596 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Zfp420Q7TMN8 578 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Timm23Q9WTQ8 209 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 Dnah12Q3V0Q1 3086 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 LbhQ9CX60 105 aa12.71□□□□□ -0.37
Ccdc88b-201ENSMUST00000113440 TncQ80YX1 2110 aa12.71□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Trav7n-4A0A075B620 113 aa12.71□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Mrps21P58059 87 aa12.71□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Olfr523Q8VFE7 317 aa12.71□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Klk10Q99M20 278 aa12.71□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Mrps11Q9DCA2 191 aaKnown RBP12.71□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Gm27021M0QWE2 156 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Atp5iQ06185 71 aaKnown RBP12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Cdkn2aQ64364 169 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Mzt1Q8BUR9 78 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Gm45717A0A1B0GT68 152 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 YrdcQ3U5F4 280 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Znrd1Q791N7 123 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Fam168aQ8BGZ2 244 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Rnase2aQ8K196 155 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Dazap2Q9DCP9 168 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Vamp8O70404 101 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 P01790 122 aa12.7□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Ighv5-12-4A0A0A6YWG4 117 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Gm45213A0A0U1RNZ6 101 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Lmo1Q924W9 156 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Pgpep1lQ9CWB5 130 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Supt4h1bQ9Z199 117 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Ighv1-18A0A0A6YXN4 117 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Smad7O35253 426 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 CompQ9R0G6 755 aa12.69□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Ndufa11Q9D8B4 141 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Hcfc2Q9D968 241 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 G6pc2Q9Z186 355 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 IcosQ9WVS0 200 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Med12lQ8BQM9 2157 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Zcwpw2Q08EN7 125 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Vdac2Q60930 295 aaKnown RBP12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Znf146Q8BQN6 292 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Tac4Q99N14 128 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Tmem167aQ9CR64 72 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 MsmpB1AWI6 139 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Tac3P55099 116 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 D130052B06RikQ3UW13 202 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Msrb3Q8BU85 253 aa12.68□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Tet2Q4JK59 1912 aaKnown RBP12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Gm21983D6RFS9 131 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Bcl6bO88282 474 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Gng7Q61016 68 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Zfp983E9PUT0 460 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Lynx1P0DP60 116 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 CtsbP10605 339 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Cphx2Q8BX39 182 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Muc15Q8C6Z1 331 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Ifitm2Q99J93 144 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Plpp2Q9DAX2 276 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Slamf6Q9ET39 351 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Gm19410A0A140LJC7 2098 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Trav16nA0A075B634 117 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Ms4a12A0A087WSB9 263 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Gm45785A0A1B0GT05 94 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 B1ARW8 110 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Khdc1cQ4KL78 166 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Mrpl16Q99N93 251 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 RetnQ99P87 114 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Dusp14Q9JLY7 198 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Znhit3Q9CQK1 151 aa12.67□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 TectaO08523 2155 aa12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 1500009C09RikD3YYW9 81 aa12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Rnf125Q9D9R0 233 aa12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Ighv1-81A0A075B5Y4 117 aa12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 P01801 115 aa12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Sumo2P61957 95 aaKnown RBP12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Timm10bQ9WV96 100 aa12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Dkk2Q9QYZ8 259 aa12.66□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Esp24A8R0V6 68 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Tmem95P0DJF3 176 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 GalmQ8K157 342 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Siglec12Q91Y57 467 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 GrhprQ91Z53 328 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 GgctQ9D7X8 188 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 GlmpQ9JHJ3 404 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 P01787 123 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 PlnP61014 52 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms