RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Q8CF25 301 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Olfr1243Q8VGM7 305 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gm3072F6SKY8 209 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Gm17654F7AXR3 209 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Ren1P06281 402 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Smim9Q3V0X1 137 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Nanos1Q80WY3 267 aa17.96■□□□□ 0.47
Cln6-201ENSMUST00000034776 Igsf23B2RTN2 239 aa17.95■□□□□ 0.46
Cln6-201ENSMUST00000034776 Gm17455G3UW87 128 aa17.95■□□□□ 0.46
Cln6-201ENSMUST00000034776 Mrpl16Q99N93 251 aa17.95■□□□□ 0.46
Cln6-201ENSMUST00000034776 Gm3512L7N206 146 aa17.95■□□□□ 0.46
Cln6-201ENSMUST00000034776 Rpp30O88796 268 aaKnown RBP17.95■□□□□ 0.46
Cln6-201ENSMUST00000034776 Fbxl15Q91W61 300 aa17.95■□□□□ 0.46
Cln6-201ENSMUST00000034776 Cxcl14Q9WUQ5 99 aa17.95■□□□□ 0.46
Cln6-201ENSMUST00000034776 Ube2g1P62254 170 aa17.94■□□□□ 0.46
Cln6-201ENSMUST00000034776 Mob4Q6PEB6 225 aa17.94■□□□□ 0.46
Cln6-201ENSMUST00000034776 Pcp4l1Q6W8Q3 68 aa17.94■□□□□ 0.46
Cln6-201ENSMUST00000034776 Nhp2Q9CRB2 153 aaKnown RBP17.94■□□□□ 0.46
Cln6-201ENSMUST00000034776 ApomQ9Z1R3 190 aa17.94■□□□□ 0.46
Cln6-201ENSMUST00000034776 Gm12886B1AZM5 119 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Sox21Q811W0 276 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Olfr810Q8VFH9 312 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Trav7-4A0A075B6C1 113 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Olfr1116E9PXB8 307 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Gm6970F7DCP6 221 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Tmem256Q5F285 113 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Trav7d-4Q5R1H9 113 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Nbl1Q61477 178 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Duxbl2Q7TNE6 350 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Gm10190Q8BSD7 107 aa17.93■□□□□ 0.46
Cln6-201ENSMUST00000034776 Ctxnd2A0A1B0GQX3 59 aa17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Cldn34c4A2ANA3 212 aa17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Lgals1P16045 135 aaKnown RBP17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 RhogP84096 191 aa17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Prr9Q8BV84 116 aa17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Urm1Q9D2P4 101 aa17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Rplp1P47955 114 aa17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Tpt1P63028 172 aaKnown RBP17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Aqp11Q8BHH1 271 aa17.92■□□□□ 0.46
Cln6-201ENSMUST00000034776 Prpf8Q99PV0 2335 aaKnown RBP17.91■□□□□ 0.46
Cln6-201ENSMUST00000034776 TdhQ8K3F7 373 aa17.91■□□□□ 0.46
Cln6-201ENSMUST00000034776 Olfr1009Q8VFK1 314 aa17.91■□□□□ 0.46
Cln6-201ENSMUST00000034776 Pdzd11Q9CZG9 140 aa17.91■□□□□ 0.46
Cln6-201ENSMUST00000034776 Gm6096D3YTY6 151 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Zfp983E9PUT0 460 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Twist1P26687 206 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Olfr16Q62007 309 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Qrich2A0A140LIY9 2337 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Hist1h1tQ07133 208 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Spink11Q09TK7 88 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Olfr745Q7TRL9 328 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Q8C3M9 231 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 OtogO55225 2910 aa17.9■□□□□ 0.46
Cln6-201ENSMUST00000034776 Trav9d-1A0A075B699 112 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Gsx1P31315 261 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Ccl21aP84444 133 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Ccl21bP86792 133 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Ccl21cP86793 133 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 KhkP97328 298 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Olfr150Q60895 312 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Tmem11Q8BK08 190 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Olfr1336Q8VGH5 314 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Scgb1b27Q91WB5 92 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Necap1Q9CR95 275 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Dido1Q8C9B9 2256 aaKnown RBP17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Igkv4-90A0A075B5L3 117 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Gm6525A0A0A6YW33 106 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Gm17727E9Q4V7 109 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 1700067P10RikG3X8U2 183 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Gm6871L7N248 545 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Cd3eP22646 189 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Cnn1Q08091 297 aaKnown RBP17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Ripply2Q2WG76 128 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Olfr873Q8VFJ0 319 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Mpv17lQ99MS3 194 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Tmem89Q9DA04 169 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 Cbln1Q9R171 193 aa17.89■□□□□ 0.45
Cln6-201ENSMUST00000034776 CrygbP04344 175 aa17.88■□□□□ 0.45
Cln6-201ENSMUST00000034776 Mfge8P21956 463 aaKnown RBP17.88■□□□□ 0.45
Cln6-201ENSMUST00000034776 5730522E02RikQ5SP45 163 aa17.88■□□□□ 0.45
Cln6-201ENSMUST00000034776 Vamp5Q9Z2P8 102 aa17.88■□□□□ 0.45
Cln6-201ENSMUST00000034776 Tep1P97499 2629 aa17.88■□□□□ 0.45
Cln6-201ENSMUST00000034776 Igkv1-133A0A0B4J1H8 120 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 D830044I16RikA0A1D5RM53 117 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Vmn1r232A2RTT5 351 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Gm16686Q3UMN9 131 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Olfr982Q8VGB3 321 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Mettl26Q9DCS2 204 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Tmem183Q9JJB9 375 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Zfp53Q9Z117 652 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Ly6lH3BJG9 140 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 S100a10P08207 97 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 PigyP0C1P0 71 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Prickle3Q80VL3 624 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Olfr984Q8VFN1 314 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 FlncQ8VHX6 2726 aaKnown RBP17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Muc2Q80Z19 2680 aa17.87■□□□□ 0.45
Cln6-201ENSMUST00000034776 Pde6hP61249 83 aa17.86■□□□□ 0.45
Cln6-201ENSMUST00000034776 Samd5Q3V1H9 173 aa17.86■□□□□ 0.45
Cln6-201ENSMUST00000034776 Tas2r114Q7M722 309 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 111.1 ms