RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SNCGO76070 127 aa11.27□□□□□ -0.61
PHGDH-216ENST00000641375 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
PHGDH-216ENST00000641375 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
PHGDH-216ENST00000641375 REG3AQ06141 175 aa11.26□□□□□ -0.61
PHGDH-216ENST00000641375 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
PHGDH-216ENST00000641375 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
PHGDH-216ENST00000641375 CLPSL2Q6UWE3 100 aa11.26□□□□□ -0.61
PHGDH-216ENST00000641375 ANKRD29Q8N6D5 301 aa11.26□□□□□ -0.61
PHGDH-216ENST00000641375 TIMM17BO60830 172 aa11.25□□□□□ -0.61
PHGDH-216ENST00000641375 Q9H8V8 135 aa11.25□□□□□ -0.61
PHGDH-216ENST00000641375 XCL1P47992 114 aa11.24□□□□□ -0.61
PHGDH-216ENST00000641375 CIRBPQ14011 172 aaKnown RBP11.24□□□□□ -0.61
PHGDH-216ENST00000641375 Q8N3U1 123 aa11.24□□□□□ -0.61
PHGDH-216ENST00000641375 LITAFQ99732 161 aa11.24□□□□□ -0.61
PHGDH-216ENST00000641375 TCL1BO95988 128 aa11.23□□□□□ -0.61
PHGDH-216ENST00000641375 LINC01561Q8N1V8 128 aa11.23□□□□□ -0.61
PHGDH-216ENST00000641375 COX7B2Q8TF08 81 aa11.23□□□□□ -0.61
PHGDH-216ENST00000641375 SPANXDQ9BXN6 97 aa11.23□□□□□ -0.61
PHGDH-216ENST00000641375 SPANXCQ9NY87 97 aa11.23□□□□□ -0.61
PHGDH-216ENST00000641375 CD164L2Q6UWJ8 174 aa11.23□□□□□ -0.61
PHGDH-216ENST00000641375 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
PHGDH-216ENST00000641375 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-216ENST00000641375 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
PHGDH-216ENST00000641375 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.61
PHGDH-216ENST00000641375 TMEM126AQ9H061 195 aa11.21□□□□□ -0.61
PHGDH-216ENST00000641375 HUWE1Q7Z6Z7 4374 aaKnown RBP11.21□□□□□ -0.61
PHGDH-216ENST00000641375 CHCHD10Q8WYQ3 142 aaPredicted RBP11.21□□□□□ -0.62
PHGDH-216ENST00000641375 PRR34Q9NV39 138 aa11.21□□□□□ -0.62
PHGDH-216ENST00000641375 MIAQ16674 131 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 ESRGQ1W209 222 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 B9D2Q9BPU9 175 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
PHGDH-216ENST00000641375 PRSS2P07478 247 aa11.19□□□□□ -0.62
PHGDH-216ENST00000641375 LINC01600Q96MT4 127 aa11.19□□□□□ -0.62
PHGDH-216ENST00000641375 COX7A2LO14548 114 aa11.18□□□□□ -0.62
PHGDH-216ENST00000641375 WFDC10BQ8IUB3 73 aa11.18□□□□□ -0.62
PHGDH-216ENST00000641375 IGLV10-54A0A075B6I4 117 aa11.18□□□□□ -0.62
PHGDH-216ENST00000641375 SLC25A20O43772 301 aa11.17□□□□□ -0.62
PHGDH-216ENST00000641375 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
PHGDH-216ENST00000641375 CRPP02741 224 aa11.17□□□□□ -0.62
PHGDH-216ENST00000641375 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
PHGDH-216ENST00000641375 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-216ENST00000641375 A4D1N5 150 aa11.17□□□□□ -0.62
PHGDH-216ENST00000641375 COPS9Q8WXC6 57 aa11.17□□□□□ -0.62
PHGDH-216ENST00000641375 TRAV8-4A0A0B4J246 113 aa11.16□□□□□ -0.62
PHGDH-216ENST00000641375 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
PHGDH-216ENST00000641375 Q8IZM0 81 aa11.16□□□□□ -0.62
PHGDH-216ENST00000641375 CFC1BP0CG36 223 aa11.16□□□□□ -0.62
PHGDH-216ENST00000641375 CFC1P0CG37 223 aa11.16□□□□□ -0.62
PHGDH-216ENST00000641375 MALP21145 153 aa11.16□□□□□ -0.62
PHGDH-216ENST00000641375 ENHOQ6UWT2 76 aa11.16□□□□□ -0.62
PHGDH-216ENST00000641375 RPL13AP40429 203 aaKnown RBP11.14□□□□□ -0.63
PHGDH-216ENST00000641375 A0A0B4J2C4 111 aa11.14□□□□□ -0.63
PHGDH-216ENST00000641375 LINC01556Q5JQF7 62 aa11.14□□□□□ -0.63
PHGDH-216ENST00000641375 UBE2WQ96B02 151 aa11.14□□□□□ -0.63
PHGDH-216ENST00000641375 DAND5Q8N907 189 aa11.13□□□□□ -0.63
PHGDH-216ENST00000641375 PRO1854Q9UHT4 67 aa11.13□□□□□ -0.63
PHGDH-216ENST00000641375 COL7A1Q02388 2944 aa11.12□□□□□ -0.63
PHGDH-216ENST00000641375 IBA57-AS1B1ANH7 110 aa11.11□□□□□ -0.63
PHGDH-216ENST00000641375 NPC2P61916 151 aa11.11□□□□□ -0.63
PHGDH-216ENST00000641375 A0A0U1RRA0 63 aa11.11□□□□□ -0.63
PHGDH-216ENST00000641375 C9JAW5 83 aa11.11□□□□□ -0.63
PHGDH-216ENST00000641375 CXCL5P42830 114 aa11.11□□□□□ -0.63
PHGDH-216ENST00000641375 LINC00308Q8TCZ7 52 aa11.11□□□□□ -0.63
PHGDH-216ENST00000641375 PPDPFQ9H3Y8 114 aa11.11□□□□□ -0.63
PHGDH-216ENST00000641375 CCL18P55774 89 aa11.1□□□□□ -0.63
PHGDH-216ENST00000641375 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
PHGDH-216ENST00000641375 DNAH10OSP0CZ25 163 aa11.09□□□□□ -0.63
PHGDH-216ENST00000641375 NTN5Q8WTR8 489 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-216ENST00000641375 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-216ENST00000641375 KIAA0087Q14695 138 aa11.09□□□□□ -0.63
PHGDH-216ENST00000641375 C5orf47Q569G3 176 aa11.09□□□□□ -0.63
PHGDH-216ENST00000641375 LINC00158P58513 81 aa11.07□□□□□ -0.64
PHGDH-216ENST00000641375 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
PHGDH-216ENST00000641375 ATXN8Q156A1 80 aa11.07□□□□□ -0.64
PHGDH-216ENST00000641375 STAB2Q8WWQ8 2551 aa11.07□□□□□ -0.64
PHGDH-216ENST00000641375 FAM240AA0A1B0GVK7 77 aa11.06□□□□□ -0.64
PHGDH-216ENST00000641375 EIF4EBP3O60516 100 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-216ENST00000641375 MIR7-3HGQ8N6C7 128 aa11.06□□□□□ -0.64
PHGDH-216ENST00000641375 TRBV7-7A0A0K0K1E9 115 aa11.06□□□□□ -0.64
PHGDH-216ENST00000641375 LINC01620Q4KN68 170 aa11.06□□□□□ -0.64
PHGDH-216ENST00000641375 C2orf82Q6UX34 121 aa11.06□□□□□ -0.64
PHGDH-216ENST00000641375 TRBV10-2A0A0K0K1G8 114 aa11.05□□□□□ -0.64
PHGDH-216ENST00000641375 KRTAP21-3Q3LHN1 58 aa11.05□□□□□ -0.64
PHGDH-216ENST00000641375 SOSTDC1Q6X4U4 206 aa11.04□□□□□ -0.64
PHGDH-216ENST00000641375 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
PHGDH-216ENST00000641375 PFN2P35080 140 aa11.04□□□□□ -0.64
PHGDH-216ENST00000641375 SPAG11BQ08648 103 aa11.04□□□□□ -0.64
PHGDH-216ENST00000641375 COX17Q14061 63 aa11.04□□□□□ -0.64
PHGDH-216ENST00000641375 UPK3BQ9BT76 320 aa11.04□□□□□ -0.64
PHGDH-216ENST00000641375 KRTAP26-1Q6PEX3 210 aa11.02□□□□□ -0.65
PHGDH-216ENST00000641375 TEX49A0A1B0GTD5 131 aa11.01□□□□□ -0.65
PHGDH-216ENST00000641375 Q1RN00 199 aa11.01□□□□□ -0.65
PHGDH-216ENST00000641375 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
PHGDH-216ENST00000641375 H7C2G1 150 aa11□□□□□ -0.65
PHGDH-216ENST00000641375 IGKV2D-24A0A075B6R9 120 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms