RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TSPAN13O95857 204 aa11.74□□□□□ -0.53
PHGDH-208ENST00000641023 LINC00308Q8TCZ7 52 aa11.74□□□□□ -0.53
PHGDH-208ENST00000641023 TRAV8-4A0A0B4J246 113 aa11.74□□□□□ -0.53
PHGDH-208ENST00000641023 ENHOQ6UWT2 76 aa11.74□□□□□ -0.53
PHGDH-208ENST00000641023 FOXI1Q12951 378 aa11.73□□□□□ -0.53
PHGDH-208ENST00000641023 UBE2WQ96B02 151 aa11.73□□□□□ -0.53
PHGDH-208ENST00000641023 IBA57-AS1B1ANH7 110 aa11.72□□□□□ -0.53
PHGDH-208ENST00000641023 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
PHGDH-208ENST00000641023 ERG28Q9UKR5 140 aa11.71□□□□□ -0.53
PHGDH-208ENST00000641023 EIF4EBP3O60516 100 aaPredicted RBP11.71□□□□□ -0.54
PHGDH-208ENST00000641023 CKS1BP61024 79 aa11.71□□□□□ -0.54
PHGDH-208ENST00000641023 LYRM7Q5U5X0 104 aa11.7□□□□□ -0.54
PHGDH-208ENST00000641023 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
PHGDH-208ENST00000641023 PPDPFQ9H3Y8 114 aa11.7□□□□□ -0.54
PHGDH-208ENST00000641023 LOC107984156A0A0G2JMH3 177 aa11.69□□□□□ -0.54
PHGDH-208ENST00000641023 CXCL5P42830 114 aa11.69□□□□□ -0.54
PHGDH-208ENST00000641023 LINC00158P58513 81 aa11.69□□□□□ -0.54
PHGDH-208ENST00000641023 ARL17AQ8IVW1 177 aa11.69□□□□□ -0.54
PHGDH-208ENST00000641023 B9D2Q9BPU9 175 aa11.69□□□□□ -0.54
PHGDH-208ENST00000641023 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
PHGDH-208ENST00000641023 KIAA0087Q14695 138 aa11.68□□□□□ -0.54
PHGDH-208ENST00000641023 MIR7-3HGQ8N6C7 128 aa11.68□□□□□ -0.54
PHGDH-208ENST00000641023 Q1RN00 199 aa11.67□□□□□ -0.54
PHGDH-208ENST00000641023 KLK5Q9Y337 293 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-208ENST00000641023 H7C2G1 150 aa11.67□□□□□ -0.54
PHGDH-208ENST00000641023 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
PHGDH-208ENST00000641023 PFN2P35080 140 aa11.66□□□□□ -0.54
PHGDH-208ENST00000641023 C2orf82Q6UX34 121 aa11.66□□□□□ -0.54
PHGDH-208ENST00000641023 CCL18P55774 89 aa11.66□□□□□ -0.54
PHGDH-208ENST00000641023 SCGB1C2P0DMR2 95 aa11.65□□□□□ -0.54
PHGDH-208ENST00000641023 PSMB2P49721 201 aa11.65□□□□□ -0.54
PHGDH-208ENST00000641023 H3BMG7 143 aa11.64□□□□□ -0.55
PHGDH-208ENST00000641023 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
PHGDH-208ENST00000641023 SPAG11BQ08648 103 aa11.63□□□□□ -0.55
PHGDH-208ENST00000641023 LINC00588Q9Y4M8 146 aa11.63□□□□□ -0.55
PHGDH-208ENST00000641023 TRBV20-1A0A075B6N2 111 aa11.63□□□□□ -0.55
PHGDH-208ENST00000641023 COX17Q14061 63 aa11.63□□□□□ -0.55
PHGDH-208ENST00000641023 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
PHGDH-208ENST00000641023 C1orf43Q9BWL3 253 aa11.61□□□□□ -0.55
PHGDH-208ENST00000641023 DNAH9Q9NYC9 4486 aa11.61□□□□□ -0.55
PHGDH-208ENST00000641023 SND1-IT1Q9HBX3 110 aa11.61□□□□□ -0.55
PHGDH-208ENST00000641023 RPL13AP40429 203 aaKnown RBP11.6□□□□□ -0.55
PHGDH-208ENST00000641023 F8W1H4 67 aa11.59□□□□□ -0.55
PHGDH-208ENST00000641023 NHLRC4P0CG21 123 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-208ENST00000641023 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
PHGDH-208ENST00000641023 COX6CP09669 75 aa11.59□□□□□ -0.55
PHGDH-208ENST00000641023 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.56
PHGDH-208ENST00000641023 TCL1BO95988 128 aa11.58□□□□□ -0.56
PHGDH-208ENST00000641023 C6orf223Q8N319 242 aa11.58□□□□□ -0.56
PHGDH-208ENST00000641023 IGKV2D-24A0A075B6R9 120 aa11.57□□□□□ -0.56
PHGDH-208ENST00000641023 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
PHGDH-208ENST00000641023 TRIAP1O43715 76 aa11.57□□□□□ -0.56
PHGDH-208ENST00000641023 ZNF561-AS1K7EIQ3 104 aa11.56□□□□□ -0.56
PHGDH-208ENST00000641023 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
PHGDH-208ENST00000641023 STAB2Q8WWQ8 2551 aa11.56□□□□□ -0.56
PHGDH-208ENST00000641023 UNQ6190/PRO20217Q6UXQ8 127 aa11.56□□□□□ -0.56
PHGDH-208ENST00000641023 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-208ENST00000641023 LINC00526Q96FQ7 95 aa11.56□□□□□ -0.56
PHGDH-208ENST00000641023 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
PHGDH-208ENST00000641023 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-208ENST00000641023 COL7A1Q02388 2944 aa11.54□□□□□ -0.56
PHGDH-208ENST00000641023 C10orf25Q5T742 122 aa11.54□□□□□ -0.56
PHGDH-208ENST00000641023 Q9HAA7 133 aa11.53□□□□□ -0.56
PHGDH-208ENST00000641023 IGKV2-28A0A075B6P5 120 aa11.53□□□□□ -0.56
PHGDH-208ENST00000641023 GVQW2A0A096LPI5 108 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-208ENST00000641023 IGKV2D-28P01615 120 aa11.53□□□□□ -0.56
PHGDH-208ENST00000641023 ATXN8Q156A1 80 aa11.52□□□□□ -0.57
PHGDH-208ENST00000641023 HIGD2BQ4VC39 106 aa11.51□□□□□ -0.57
PHGDH-208ENST00000641023 LINC00337Q8N6G1 96 aa11.51□□□□□ -0.57
PHGDH-208ENST00000641023 PRO0461Q9UI25 63 aa11.51□□□□□ -0.57
PHGDH-208ENST00000641023 CAMK2N2Q96S95 79 aa11.51□□□□□ -0.57
PHGDH-208ENST00000641023 DNHD1Q96M86 4753 aa11.51□□□□□ -0.57
PHGDH-208ENST00000641023 WFDC2Q14508 124 aa11.5□□□□□ -0.57
PHGDH-208ENST00000641023 MTURNQ8N3F0 131 aa11.5□□□□□ -0.57
PHGDH-208ENST00000641023 C15orf56Q8N910 161 aa11.5□□□□□ -0.57
PHGDH-208ENST00000641023 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
PHGDH-208ENST00000641023 RMI2Q96E14 147 aa11.49□□□□□ -0.57
PHGDH-208ENST00000641023 C6orf48Q9UBA6 75 aa11.49□□□□□ -0.57
PHGDH-208ENST00000641023 APLNQ9ULZ1 77 aa11.49□□□□□ -0.57
PHGDH-208ENST00000641023 NDUFC2O95298 119 aa11.48□□□□□ -0.57
PHGDH-208ENST00000641023 OCIAD2Q56VL3 154 aa11.48□□□□□ -0.57
PHGDH-208ENST00000641023 F8WDY8 70 aa11.47□□□□□ -0.57
PHGDH-208ENST00000641023 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
PHGDH-208ENST00000641023 NUPR2A6NF83 97 aa11.46□□□□□ -0.57
PHGDH-208ENST00000641023 UBE2DNLQ8IWF7 75 aa11.46□□□□□ -0.57
PHGDH-208ENST00000641023 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
PHGDH-208ENST00000641023 C9JAW5 83 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 K7ERU9 68 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 LST1O00453 97 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 PCP4P48539 62 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 KRTAP21-3Q3LHN1 58 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 ETDBQ3ZM63 59 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 LINC01620Q4KN68 170 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 CLEC2BQ92478 149 aa11.45□□□□□ -0.58
PHGDH-208ENST00000641023 SMCPP49901 116 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-208ENST00000641023 Q6ZRU5 148 aa11.44□□□□□ -0.58
PHGDH-208ENST00000641023 SLC25A20O43772 301 aa11.43□□□□□ -0.58
PHGDH-208ENST00000641023 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
PHGDH-208ENST00000641023 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
PHGDH-208ENST00000641023 TMEM126AQ9H061 195 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms