RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C14orf132Q9NPU4 83 aa10.22□□□□□ -0.77
SCARB2-221ENST00000640341 C19orf73Q9NVV2 129 aa10.21□□□□□ -0.77
SCARB2-221ENST00000640341 C9orf129Q5T035 196 aaKnown RBP10.21□□□□□ -0.77
SCARB2-221ENST00000640341 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.78
SCARB2-221ENST00000640341 TRACP01848 142 aa10.2□□□□□ -0.78
SCARB2-221ENST00000640341 MALP21145 153 aa10.2□□□□□ -0.78
SCARB2-221ENST00000640341 Q8N3U1 123 aa10.2□□□□□ -0.78
SCARB2-221ENST00000640341 LINC00959A0A1B0GUT2 108 aa10.2□□□□□ -0.78
SCARB2-221ENST00000640341 HTN3P15516 51 aa10.2□□□□□ -0.78
SCARB2-221ENST00000640341 FAM240AA0A1B0GVK7 77 aa10.19□□□□□ -0.78
SCARB2-221ENST00000640341 FAM19A3Q7Z5A8 133 aa10.19□□□□□ -0.78
SCARB2-221ENST00000640341 LINC01600Q96MT4 127 aa10.18□□□□□ -0.78
SCARB2-221ENST00000640341 NCR3O14931 201 aa10.17□□□□□ -0.78
SCARB2-221ENST00000640341 Q6Q795 121 aa10.17□□□□□ -0.78
SCARB2-221ENST00000640341 RPL28P46779 137 aaKnown RBP10.17□□□□□ -0.78
SCARB2-221ENST00000640341 CMC4P56277 68 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-221ENST00000640341 A0A087WZ39 114 aa10.17□□□□□ -0.78
SCARB2-221ENST00000640341 DEFB121Q5J5C9 76 aa10.17□□□□□ -0.78
SCARB2-221ENST00000640341 LINC00269Q8N2A0 174 aa10.17□□□□□ -0.78
SCARB2-221ENST00000640341 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
SCARB2-221ENST00000640341 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
SCARB2-221ENST00000640341 F8P00451 2351 aa10.16□□□□□ -0.78
SCARB2-221ENST00000640341 SS18Q15532 418 aa10.16□□□□□ -0.78
SCARB2-221ENST00000640341 DEFB135Q30KP9 77 aa10.16□□□□□ -0.78
SCARB2-221ENST00000640341 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
SCARB2-221ENST00000640341 J3QKU1 62 aa10.16□□□□□ -0.78
SCARB2-221ENST00000640341 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
SCARB2-221ENST00000640341 FAM222AQ5U5X8 452 aa10.16□□□□□ -0.78
SCARB2-221ENST00000640341 PDZD2O15018 2839 aa10.15□□□□□ -0.78
SCARB2-221ENST00000640341 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.78
SCARB2-221ENST00000640341 ANGP03950 147 aaKnown RBP10.15□□□□□ -0.78
SCARB2-221ENST00000640341 TENM1Q9UKZ4 2725 aa10.15□□□□□ -0.78
SCARB2-221ENST00000640341 IBA57-AS1B1ANH7 110 aa10.15□□□□□ -0.78
SCARB2-221ENST00000640341 SDIM1Q6ZPB5 146 aa10.15□□□□□ -0.78
SCARB2-221ENST00000640341 SPATA3Q8NHX4 192 aa10.15□□□□□ -0.78
SCARB2-221ENST00000640341 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
SCARB2-221ENST00000640341 ACYP1P07311 99 aa10.14□□□□□ -0.79
SCARB2-221ENST00000640341 LINC00643Q86TS7 51 aa10.13□□□□□ -0.79
SCARB2-221ENST00000640341 KRTAP1-1Q07627 177 aa10.13□□□□□ -0.79
SCARB2-221ENST00000640341 MRPL23Q16540 153 aaKnown RBP10.13□□□□□ -0.79
SCARB2-221ENST00000640341 OTOGQ6ZRI0 2925 aa10.12□□□□□ -0.79
SCARB2-221ENST00000640341 KMT2BQ9UMN6 2715 aaPredicted RBP10.12□□□□□ -0.79
SCARB2-221ENST00000640341 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
SCARB2-221ENST00000640341 PRO0255Q9UI72 69 aa10.11□□□□□ -0.79
SCARB2-221ENST00000640341 TRBV7-7A0A0K0K1E9 115 aa10.11□□□□□ -0.79
SCARB2-221ENST00000640341 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
SCARB2-221ENST00000640341 ANK3Q12955 4377 aaKnown RBP10.09□□□□□ -0.79
SCARB2-221ENST00000640341 H0YGX0 51 aa10.09□□□□□ -0.79
SCARB2-221ENST00000640341 TRRAPQ9Y4A5 3859 aa10.09□□□□□ -0.79
SCARB2-221ENST00000640341 A0A087WVE0 104 aa10.08□□□□□ -0.8
SCARB2-221ENST00000640341 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-221ENST00000640341 HILS1P60008 231 aa10.08□□□□□ -0.8
SCARB2-221ENST00000640341 X6R8D5 127 aa10.08□□□□□ -0.8
SCARB2-221ENST00000640341 BAHCC1Q9P281 2608 aa10.07□□□□□ -0.8
SCARB2-221ENST00000640341 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
SCARB2-221ENST00000640341 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
SCARB2-221ENST00000640341 LINC00846Q9NV44 126 aa10.07□□□□□ -0.8
SCARB2-221ENST00000640341 DAD1P61803 113 aa10.06□□□□□ -0.8
SCARB2-221ENST00000640341 C6orf223Q8N319 242 aa10.06□□□□□ -0.8
SCARB2-221ENST00000640341 ORMDL1Q9P0S3 153 aa10.06□□□□□ -0.8
SCARB2-221ENST00000640341 REG3AQ06141 175 aa10.06□□□□□ -0.8
SCARB2-221ENST00000640341 CXCL5P42830 114 aa10.05□□□□□ -0.8
SCARB2-221ENST00000640341 HIST1H4AP62805 103 aaKnown RBP10.05□□□□□ -0.8
SCARB2-221ENST00000640341 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
SCARB2-221ENST00000640341 FAM110AQ9BQ89 295 aa10.05□□□□□ -0.8
SCARB2-221ENST00000640341 S100A7L2Q5SY68 101 aa10.05□□□□□ -0.8
SCARB2-221ENST00000640341 HIVEP1P15822 2718 aa10.05□□□□□ -0.8
SCARB2-221ENST00000640341 Q8IZM0 81 aa10.04□□□□□ -0.8
SCARB2-221ENST00000640341 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
SCARB2-221ENST00000640341 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
SCARB2-221ENST00000640341 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-221ENST00000640341 CELA1Q9UNI1 258 aa10.03□□□□□ -0.8
SCARB2-221ENST00000640341 MAST4O15021 2626 aa10.03□□□□□ -0.8
SCARB2-221ENST00000640341 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
SCARB2-221ENST00000640341 KLK12Q9UKR0 248 aa10.03□□□□□ -0.8
SCARB2-221ENST00000640341 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.81
SCARB2-221ENST00000640341 IMUPQ9GZP8 106 aa10.02□□□□□ -0.81
SCARB2-221ENST00000640341 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
SCARB2-221ENST00000640341 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
SCARB2-221ENST00000640341 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
SCARB2-221ENST00000640341 Q8NDZ9 215 aa10□□□□□ -0.81
SCARB2-221ENST00000640341 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
SCARB2-221ENST00000640341 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
SCARB2-221ENST00000640341 TMEM126AQ9H061 195 aa9.99□□□□□ -0.81
SCARB2-221ENST00000640341 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
SCARB2-221ENST00000640341 PKD1L1Q8TDX9 2849 aa9.99□□□□□ -0.81
SCARB2-221ENST00000640341 A0A1B0GX51 115 aa9.98□□□□□ -0.81
SCARB2-221ENST00000640341 INAFM1C9JVW0 142 aa9.98□□□□□ -0.81
SCARB2-221ENST00000640341 NANOS2P60321 138 aaKnown RBP9.98□□□□□ -0.81
SCARB2-221ENST00000640341 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
SCARB2-221ENST00000640341 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
SCARB2-221ENST00000640341 Q8N814 137 aa9.98□□□□□ -0.81
SCARB2-221ENST00000640341 NSD1Q96L73 2696 aaPredicted RBP9.98□□□□□ -0.81
SCARB2-221ENST00000640341 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
SCARB2-221ENST00000640341 LY6G6DO95868 133 aa9.97□□□□□ -0.81
SCARB2-221ENST00000640341 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
SCARB2-221ENST00000640341 LINC00612Q8N6U2 182 aa9.96□□□□□ -0.82
SCARB2-221ENST00000640341 hADV29S1A0JD25 119 aa9.95□□□□□ -0.82
SCARB2-221ENST00000640341 CYSRT1A8MQ03 144 aa9.95□□□□□ -0.82
SCARB2-221ENST00000640341 LYRM9A8MSI8 78 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 240.4 ms