RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 LINC01620Q4KN68 170 aa10.42□□□□□ -0.74
TRIM3-215ENST00000639856 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
TRIM3-215ENST00000639856 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
TRIM3-215ENST00000639856 PPDPFLQ8WWR9 84 aa10.42□□□□□ -0.74
TRIM3-215ENST00000639856 GAGE12HA6NDE8 117 aa10.4□□□□□ -0.74
TRIM3-215ENST00000639856 ANKRD29Q8N6D5 301 aa10.4□□□□□ -0.74
TRIM3-215ENST00000639856 SCGB1A1P11684 91 aa10.4□□□□□ -0.74
TRIM3-215ENST00000639856 SS18Q15532 418 aa10.4□□□□□ -0.74
TRIM3-215ENST00000639856 CARD19Q96LW7 228 aa10.4□□□□□ -0.74
TRIM3-215ENST00000639856 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
TRIM3-215ENST00000639856 LINC01600Q96MT4 127 aa10.39□□□□□ -0.75
TRIM3-215ENST00000639856 XCL1P47992 114 aa10.38□□□□□ -0.75
TRIM3-215ENST00000639856 TRBV10-2A0A0K0K1G8 114 aa10.37□□□□□ -0.75
TRIM3-215ENST00000639856 MIR7-3HGQ8N6C7 128 aa10.37□□□□□ -0.75
TRIM3-215ENST00000639856 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
TRIM3-215ENST00000639856 LST1O00453 97 aa10.37□□□□□ -0.75
TRIM3-215ENST00000639856 CLPSL2Q6UWE3 100 aa10.37□□□□□ -0.75
TRIM3-215ENST00000639856 SIGMAR1Q99720 223 aa10.37□□□□□ -0.75
TRIM3-215ENST00000639856 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
TRIM3-215ENST00000639856 K7EIL1 84 aa10.36□□□□□ -0.75
TRIM3-215ENST00000639856 LINC00158P58513 81 aa10.36□□□□□ -0.75
TRIM3-215ENST00000639856 A0A0J9YWU9 116 aa10.35□□□□□ -0.75
TRIM3-215ENST00000639856 C6orf226Q5I0X4 101 aa10.35□□□□□ -0.75
TRIM3-215ENST00000639856 LINC01561Q8N1V8 128 aa10.35□□□□□ -0.75
TRIM3-215ENST00000639856 MRPL23Q16540 153 aaKnown RBP10.34□□□□□ -0.75
TRIM3-215ENST00000639856 LINC00269Q8N2A0 174 aa10.34□□□□□ -0.75
TRIM3-215ENST00000639856 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
TRIM3-215ENST00000639856 Q6ZTC4 211 aa10.34□□□□□ -0.75
TRIM3-215ENST00000639856 COX7A2LO14548 114 aa10.33□□□□□ -0.76
TRIM3-215ENST00000639856 Q8IZM0 81 aa10.33□□□□□ -0.76
TRIM3-215ENST00000639856 SND1-IT1Q9HBX3 110 aa10.33□□□□□ -0.76
TRIM3-215ENST00000639856 H3BT86 120 aa10.33□□□□□ -0.76
TRIM3-215ENST00000639856 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
TRIM3-215ENST00000639856 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
TRIM3-215ENST00000639856 NTN5Q8WTR8 489 aaPredicted RBP10.33□□□□□ -0.76
TRIM3-215ENST00000639856 TRAV13-2A0A0B4J235 113 aa10.32□□□□□ -0.76
TRIM3-215ENST00000639856 DEFB121Q5J5C9 76 aa10.32□□□□□ -0.76
TRIM3-215ENST00000639856 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
TRIM3-215ENST00000639856 Q8N3U1 123 aa10.32□□□□□ -0.76
TRIM3-215ENST00000639856 PFN2P35080 140 aa10.31□□□□□ -0.76
TRIM3-215ENST00000639856 REG3AQ06141 175 aa10.31□□□□□ -0.76
TRIM3-215ENST00000639856 C2orf82Q6UX34 121 aa10.31□□□□□ -0.76
TRIM3-215ENST00000639856 CCL18P55774 89 aa10.31□□□□□ -0.76
TRIM3-215ENST00000639856 NANOS2P60321 138 aaKnown RBP10.31□□□□□ -0.76
TRIM3-215ENST00000639856 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
TRIM3-215ENST00000639856 CDIP1Q9H305 208 aa10.31□□□□□ -0.76
TRIM3-215ENST00000639856 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
TRIM3-215ENST00000639856 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
TRIM3-215ENST00000639856 CRPP02741 224 aa10.3□□□□□ -0.76
TRIM3-215ENST00000639856 LELP1Q5T871 98 aa10.3□□□□□ -0.76
TRIM3-215ENST00000639856 CHCHD10Q8WYQ3 142 aaPredicted RBP10.3□□□□□ -0.76
TRIM3-215ENST00000639856 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
TRIM3-215ENST00000639856 IGLV10-54A0A075B6I4 117 aa10.28□□□□□ -0.76
TRIM3-215ENST00000639856 A0A1B0GV72 72 aa10.28□□□□□ -0.76
TRIM3-215ENST00000639856 TEX49A0A1B0GTD5 131 aa10.28□□□□□ -0.76
TRIM3-215ENST00000639856 RPL28P46779 137 aaKnown RBP10.28□□□□□ -0.76
TRIM3-215ENST00000639856 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
TRIM3-215ENST00000639856 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
TRIM3-215ENST00000639856 TM2D3Q9BRN9 247 aa10.28□□□□□ -0.76
TRIM3-215ENST00000639856 CKS1BP61024 79 aa10.27□□□□□ -0.77
TRIM3-215ENST00000639856 KIAA0087Q14695 138 aa10.27□□□□□ -0.77
TRIM3-215ENST00000639856 MALP21145 153 aa10.25□□□□□ -0.77
TRIM3-215ENST00000639856 CXCL5P42830 114 aa10.25□□□□□ -0.77
TRIM3-215ENST00000639856 TRACP01848 142 aa10.25□□□□□ -0.77
TRIM3-215ENST00000639856 CFAP161Q6P656 301 aa10.24□□□□□ -0.77
TRIM3-215ENST00000639856 LYPD5Q6UWN5 251 aa10.24□□□□□ -0.77
TRIM3-215ENST00000639856 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
TRIM3-215ENST00000639856 PRR34Q9NV39 138 aa10.24□□□□□ -0.77
TRIM3-215ENST00000639856 COX17Q14061 63 aa10.23□□□□□ -0.77
TRIM3-215ENST00000639856 SMIM11BQ8TCY0 68 aa10.23□□□□□ -0.77
TRIM3-215ENST00000639856 H3BNG1 76 aa10.22□□□□□ -0.77
TRIM3-215ENST00000639856 FAM218AQ96MZ4 157 aa10.22□□□□□ -0.77
TRIM3-215ENST00000639856 COL7A1Q02388 2944 aa10.22□□□□□ -0.77
TRIM3-215ENST00000639856 XGP55808 180 aa10.22□□□□□ -0.77
TRIM3-215ENST00000639856 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
TRIM3-215ENST00000639856 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.77
TRIM3-215ENST00000639856 HUWE1Q7Z6Z7 4374 aaKnown RBP10.21□□□□□ -0.77
TRIM3-215ENST00000639856 KLK5Q9Y337 293 aaPredicted RBP10.2□□□□□ -0.78
TRIM3-215ENST00000639856 TRAV8-4A0A0B4J246 113 aa10.19□□□□□ -0.78
TRIM3-215ENST00000639856 MT-ATP8P03928 68 aa10.19□□□□□ -0.78
TRIM3-215ENST00000639856 ENHOQ6UWT2 76 aa10.19□□□□□ -0.78
TRIM3-215ENST00000639856 WFDC10BQ8IUB3 73 aa10.19□□□□□ -0.78
TRIM3-215ENST00000639856 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
TRIM3-215ENST00000639856 H0YGX0 51 aa10.18□□□□□ -0.78
TRIM3-215ENST00000639856 ESRGQ1W209 222 aa10.18□□□□□ -0.78
TRIM3-215ENST00000639856 NDUFC2O95298 119 aa10.17□□□□□ -0.78
TRIM3-215ENST00000639856 BAALC-AS2P0C853 105 aa10.17□□□□□ -0.78
TRIM3-215ENST00000639856 SPAG11BQ08648 103 aa10.17□□□□□ -0.78
TRIM3-215ENST00000639856 C9orf116Q5BN46 136 aaPredicted RBP10.17□□□□□ -0.78
TRIM3-215ENST00000639856 C6orf223Q8N319 242 aa10.15□□□□□ -0.78
TRIM3-215ENST00000639856 A0A087WYN8 130 aa10.15□□□□□ -0.79
TRIM3-215ENST00000639856 TRAV10A0A0B4J240 114 aa10.15□□□□□ -0.79
TRIM3-215ENST00000639856 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.79
TRIM3-215ENST00000639856 Q9HAA7 133 aa10.15□□□□□ -0.79
TRIM3-215ENST00000639856 FAM240AA0A1B0GVK7 77 aa10.14□□□□□ -0.79
TRIM3-215ENST00000639856 C10orf25Q5T742 122 aa10.14□□□□□ -0.79
TRIM3-215ENST00000639856 C22orf24Q9Y442 160 aa10.14□□□□□ -0.79
TRIM3-215ENST00000639856 DNAL4O96015 105 aa10.13□□□□□ -0.79
TRIM3-215ENST00000639856 PRR3P79522 188 aaKnown RBP10.13□□□□□ -0.79
TRIM3-215ENST00000639856 MUC7Q8TAX7 377 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms