RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
SCN8A-215ENST00000638820 COPS9Q8WXC6 57 aa9.02□□□□□ -0.97
SCN8A-215ENST00000638820 ANK2Q01484 3957 aa9.01□□□□□ -0.97
SCN8A-215ENST00000638820 TGP01266 2768 aa9.01□□□□□ -0.97
SCN8A-215ENST00000638820 MIR7-3HGQ8N6C7 128 aa9.01□□□□□ -0.97
SCN8A-215ENST00000638820 ADAMTSL4-AS1Q5T5F5 129 aa9.01□□□□□ -0.97
SCN8A-215ENST00000638820 RMI2Q96E14 147 aa9□□□□□ -0.97
SCN8A-215ENST00000638820 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
SCN8A-215ENST00000638820 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
SCN8A-215ENST00000638820 COX11Q9Y6N1 276 aa9□□□□□ -0.97
SCN8A-215ENST00000638820 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
SCN8A-215ENST00000638820 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
SCN8A-215ENST00000638820 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
SCN8A-215ENST00000638820 TAX1BP3O14907 124 aa8.99□□□□□ -0.97
SCN8A-215ENST00000638820 FABP2P12104 132 aa8.99□□□□□ -0.97
SCN8A-215ENST00000638820 Q8IZM0 81 aa8.99□□□□□ -0.97
SCN8A-215ENST00000638820 FOXI1Q12951 378 aa8.99□□□□□ -0.97
SCN8A-215ENST00000638820 ERG28Q9UKR5 140 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 OR13C6PQ8NH95 151 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 LECT2O14960 151 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 DNAH10OSP0CZ25 163 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 CXCL5P42830 114 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 C21orf62-AS1Q17RA5 79 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 KRTAP21-3Q3LHN1 58 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 C6orf223Q8N319 242 aa8.98□□□□□ -0.97
SCN8A-215ENST00000638820 GAGE10A6NGK3 116 aa8.97□□□□□ -0.97
SCN8A-215ENST00000638820 IFITM1P13164 125 aa8.96□□□□□ -0.97
SCN8A-215ENST00000638820 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.97
SCN8A-215ENST00000638820 COL7A1Q02388 2944 aa8.96□□□□□ -0.97
SCN8A-215ENST00000638820 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.97
SCN8A-215ENST00000638820 UNQ6190/PRO20217Q6UXQ8 127 aa8.96□□□□□ -0.97
SCN8A-215ENST00000638820 PRO1854Q9UHT4 67 aa8.96□□□□□ -0.97
SCN8A-215ENST00000638820 C9orf118A6NHY6 69 aa8.96□□□□□ -0.98
SCN8A-215ENST00000638820 LINC00308Q8TCZ7 52 aa8.95□□□□□ -0.98
SCN8A-215ENST00000638820 IBA57-AS1B1ANH7 110 aa8.95□□□□□ -0.98
SCN8A-215ENST00000638820 M0R2N4 97 aa8.95□□□□□ -0.98
SCN8A-215ENST00000638820 TIMM17BO60830 172 aa8.95□□□□□ -0.98
SCN8A-215ENST00000638820 SPCS1Q9Y6A9 102 aa8.95□□□□□ -0.98
SCN8A-215ENST00000638820 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
SCN8A-215ENST00000638820 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
SCN8A-215ENST00000638820 SND1-IT1Q9HBX3 110 aa8.94□□□□□ -0.98
SCN8A-215ENST00000638820 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
SCN8A-215ENST00000638820 DNHD1Q96M86 4753 aa8.94□□□□□ -0.98
SCN8A-215ENST00000638820 CFC1BP0CG36 223 aa8.93□□□□□ -0.98
SCN8A-215ENST00000638820 CFC1P0CG37 223 aa8.93□□□□□ -0.98
SCN8A-215ENST00000638820 APLNQ9ULZ1 77 aa8.93□□□□□ -0.98
SCN8A-215ENST00000638820 LINC01561Q8N1V8 128 aa8.93□□□□□ -0.98
SCN8A-215ENST00000638820 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
SCN8A-215ENST00000638820 LITAFQ99732 161 aa8.92□□□□□ -0.98
SCN8A-215ENST00000638820 MEGF8Q7Z7M0 2845 aa8.92□□□□□ -0.98
SCN8A-215ENST00000638820 COX6CP09669 75 aa8.91□□□□□ -0.98
SCN8A-215ENST00000638820 RPL13AP40429 203 aaKnown RBP8.91□□□□□ -0.98
SCN8A-215ENST00000638820 GAGE2EQ4V326 116 aa8.91□□□□□ -0.98
SCN8A-215ENST00000638820 GAGE2DQ9UEU5 116 aa8.91□□□□□ -0.98
SCN8A-215ENST00000638820 A0A1W2PPM0 123 aa8.9□□□□□ -0.98
SCN8A-215ENST00000638820 C10orf25Q5T742 122 aa8.9□□□□□ -0.98
SCN8A-215ENST00000638820 EIF4EBP3O60516 100 aaPredicted RBP8.9□□□□□ -0.99
SCN8A-215ENST00000638820 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.99
SCN8A-215ENST00000638820 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
SCN8A-215ENST00000638820 MUC7Q8TAX7 377 aa8.89□□□□□ -0.99
SCN8A-215ENST00000638820 USP17L23D6RBM5 183 aa8.89□□□□□ -0.99
SCN8A-215ENST00000638820 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
SCN8A-215ENST00000638820 TTC32Q5I0X7 151 aa8.89□□□□□ -0.99
SCN8A-215ENST00000638820 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
SCN8A-215ENST00000638820 LY6G6CO95867 125 aa8.88□□□□□ -0.99
SCN8A-215ENST00000638820 HUWE1Q7Z6Z7 4374 aaKnown RBP8.88□□□□□ -0.99
SCN8A-215ENST00000638820 TSPAN13O95857 204 aa8.87□□□□□ -0.99
SCN8A-215ENST00000638820 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
SCN8A-215ENST00000638820 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
SCN8A-215ENST00000638820 RPL18AQ02543 176 aaKnown RBP8.87□□□□□ -0.99
SCN8A-215ENST00000638820 FBN3Q75N90 2809 aa8.87□□□□□ -0.99
SCN8A-215ENST00000638820 S100A7L2Q5SY68 101 aa8.87□□□□□ -0.99
SCN8A-215ENST00000638820 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
SCN8A-215ENST00000638820 Q6ZRU5 148 aa8.86□□□□□ -0.99
SCN8A-215ENST00000638820 UBE2V1Q13404 147 aa8.86□□□□□ -0.99
SCN8A-215ENST00000638820 NTN5Q8WTR8 489 aaPredicted RBP8.86□□□□□ -0.99
SCN8A-215ENST00000638820 TRAV13-2A0A0B4J235 113 aa8.85□□□□□ -0.99
SCN8A-215ENST00000638820 CASC10Q5T4H9 136 aa8.85□□□□□ -0.99
SCN8A-215ENST00000638820 MTURNQ8N3F0 131 aa8.85□□□□□ -0.99
SCN8A-215ENST00000638820 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
SCN8A-215ENST00000638820 COX17Q14061 63 aa8.84□□□□□ -0.99
SCN8A-215ENST00000638820 A0A1B0GWB2 263 aa8.84□□□□□ -0.99
SCN8A-215ENST00000638820 C15orf56Q8N910 161 aa8.84□□□□□ -0.99
SCN8A-215ENST00000638820 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -0.99
SCN8A-215ENST00000638820 C6orf48Q9UBA6 75 aa8.84□□□□□ -0.99
SCN8A-215ENST00000638820 DNAH3Q8TD57 4116 aa8.84□□□□□ -0.99
SCN8A-215ENST00000638820 H3BMG7 143 aa8.84□□□□□ -0.99
SCN8A-215ENST00000638820 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
SCN8A-215ENST00000638820 NCR3O14931 201 aa8.83□□□□□ -1
SCN8A-215ENST00000638820 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
SCN8A-215ENST00000638820 GAGE2BQ13066 116 aa8.82□□□□□ -1
SCN8A-215ENST00000638820 DPH3Q96FX2 82 aa8.82□□□□□ -1
SCN8A-215ENST00000638820 K7EP34 96 aa8.82□□□□□ -1
SCN8A-215ENST00000638820 C2orf48Q96LS8 159 aa8.82□□□□□ -1
SCN8A-215ENST00000638820 KRTAP1-5Q9BYS1 174 aa8.82□□□□□ -1
SCN8A-215ENST00000638820 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
SCN8A-215ENST00000638820 KRTAP26-1Q6PEX3 210 aa8.8□□□□□ -1
SCN8A-215ENST00000638820 DNAH9Q9NYC9 4486 aa8.8□□□□□ -1
SCN8A-215ENST00000638820 GVQW2A0A096LPI5 108 aaPredicted RBP8.79□□□□□ -1
SCN8A-215ENST00000638820 TRIAP1O43715 76 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms