RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SEC11AP67812 179 aa11.04□□□□□ -0.64
CLN6-220ENST00000637450 PAPPA-AS1Q5QFB9 102 aa11.04□□□□□ -0.64
CLN6-220ENST00000637450 CARHSP1Q9Y2V2 147 aaKnown RBP11.04□□□□□ -0.64
CLN6-220ENST00000637450 G0S2P27469 103 aa11.03□□□□□ -0.64
CLN6-220ENST00000637450 TIMM17AQ99595 171 aa11.03□□□□□ -0.64
CLN6-220ENST00000637450 CTDSP1Q9GZU7 261 aa11.03□□□□□ -0.64
CLN6-220ENST00000637450 XAGE1AQ9HD64 81 aa11.03□□□□□ -0.64
CLN6-220ENST00000637450 F8VRH5 84 aa11.02□□□□□ -0.65
CLN6-220ENST00000637450 NUPR1O60356 82 aa11.02□□□□□ -0.65
CLN6-220ENST00000637450 LBHQ53QV2 105 aaPredicted RBP11.02□□□□□ -0.65
CLN6-220ENST00000637450 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
CLN6-220ENST00000637450 GEMIN7Q9H840 131 aaKnown RBP11.01□□□□□ -0.65
CLN6-220ENST00000637450 MUC2Q02817 5179 aa11□□□□□ -0.65
CLN6-220ENST00000637450 RAB14P61106 215 aa10.99□□□□□ -0.65
CLN6-220ENST00000637450 TP73-AS1Q9UF72 201 aa10.99□□□□□ -0.65
CLN6-220ENST00000637450 CXCL5P42830 114 aa10.98□□□□□ -0.65
CLN6-220ENST00000637450 KIAA1644Q3SXP7 199 aa10.98□□□□□ -0.65
CLN6-220ENST00000637450 ERASQ7Z444 233 aa10.98□□□□□ -0.65
CLN6-220ENST00000637450 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
CLN6-220ENST00000637450 SCGB3A1Q96QR1 104 aa10.97□□□□□ -0.65
CLN6-220ENST00000637450 SMIM1B2RUZ4 78 aa10.96□□□□□ -0.65
CLN6-220ENST00000637450 PRR4Q16378 134 aa10.96□□□□□ -0.65
CLN6-220ENST00000637450 TINCRA0A1B0GVN0 87 aa10.95□□□□□ -0.66
CLN6-220ENST00000637450 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
CLN6-220ENST00000637450 PDZD11Q5EBL8 140 aa10.95□□□□□ -0.66
CLN6-220ENST00000637450 BCE1O60756 84 aa10.94□□□□□ -0.66
CLN6-220ENST00000637450 RPL28P46779 137 aaKnown RBP10.94□□□□□ -0.66
CLN6-220ENST00000637450 COX7B2Q8TF08 81 aa10.94□□□□□ -0.66
CLN6-220ENST00000637450 IGLV5-45A0A087WSX0 123 aa10.93□□□□□ -0.66
CLN6-220ENST00000637450 LINC01546A6NGU7 62 aa10.93□□□□□ -0.66
CLN6-220ENST00000637450 LINC00167Q96N53 147 aa10.93□□□□□ -0.66
CLN6-220ENST00000637450 TRAV9-1A0A075B6T8 112 aa10.92□□□□□ -0.66
CLN6-220ENST00000637450 LINC01549A6NIU2 74 aa10.92□□□□□ -0.66
CLN6-220ENST00000637450 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
CLN6-220ENST00000637450 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
CLN6-220ENST00000637450 CLLU1Q5K131 121 aa10.91□□□□□ -0.66
CLN6-220ENST00000637450 A0A087X002 238 aa10.9□□□□□ -0.66
CLN6-220ENST00000637450 TSPAN13O95857 204 aa10.89□□□□□ -0.67
CLN6-220ENST00000637450 RAB5BP61020 215 aa10.89□□□□□ -0.67
CLN6-220ENST00000637450 GNB1LQ9BYB4 327 aa10.89□□□□□ -0.67
CLN6-220ENST00000637450 IGLV5-37A0A075B6J1 123 aa10.88□□□□□ -0.67
CLN6-220ENST00000637450 TMEM218A2RU14 115 aa10.88□□□□□ -0.67
CLN6-220ENST00000637450 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
CLN6-220ENST00000637450 SPINK8P0C7L1 97 aa10.88□□□□□ -0.67
CLN6-220ENST00000637450 CRYGAP11844 174 aa10.88□□□□□ -0.67
CLN6-220ENST00000637450 PMVKQ15126 192 aa10.87□□□□□ -0.67
CLN6-220ENST00000637450 UQCC3Q6UW78 93 aa10.87□□□□□ -0.67
CLN6-220ENST00000637450 MRPL18Q9H0U6 180 aaKnown RBP10.87□□□□□ -0.67
CLN6-220ENST00000637450 TYMSOSQ8TAI1 123 aa10.86□□□□□ -0.67
CLN6-220ENST00000637450 KRTAP13-1Q8IUC0 172 aa10.85□□□□□ -0.67
CLN6-220ENST00000637450 S100PP25815 95 aa10.84□□□□□ -0.67
CLN6-220ENST00000637450 NKAPP1Q8N9T2 125 aa10.84□□□□□ -0.67
CLN6-220ENST00000637450 ANAPC11Q9NYG5 84 aa10.84□□□□□ -0.67
CLN6-220ENST00000637450 H3BRM9 83 aa10.83□□□□□ -0.68
CLN6-220ENST00000637450 FA2HQ7L5A8 372 aa10.83□□□□□ -0.68
CLN6-220ENST00000637450 ATP5LO75964 103 aa10.82□□□□□ -0.68
CLN6-220ENST00000637450 UBE2AP49459 152 aa10.82□□□□□ -0.68
CLN6-220ENST00000637450 COX19Q49B96 90 aa10.82□□□□□ -0.68
CLN6-220ENST00000637450 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
CLN6-220ENST00000637450 FABP9Q0Z7S8 132 aa10.81□□□□□ -0.68
CLN6-220ENST00000637450 KRTAP13-2Q52LG2 175 aa10.81□□□□□ -0.68
CLN6-220ENST00000637450 SEC11CQ9BY50 192 aa10.81□□□□□ -0.68
CLN6-220ENST00000637450 SMCO4Q9NRQ5 59 aa10.81□□□□□ -0.68
CLN6-220ENST00000637450 SCO1O75880 301 aa10.8□□□□□ -0.68
CLN6-220ENST00000637450 IGLC3P0DOY3 106 aa10.8□□□□□ -0.68
CLN6-220ENST00000637450 PFN2P35080 140 aa10.8□□□□□ -0.68
CLN6-220ENST00000637450 IGKV2-28A0A075B6P5 120 aa10.79□□□□□ -0.68
CLN6-220ENST00000637450 IGKV2D-28P01615 120 aa10.79□□□□□ -0.68
CLN6-220ENST00000637450 FAM229BQ4G0N7 80 aa10.79□□□□□ -0.68
CLN6-220ENST00000637450 A0A096LNJ9 63 aa10.77□□□□□ -0.69
CLN6-220ENST00000637450 IFITM2Q01629 132 aa10.77□□□□□ -0.69
CLN6-220ENST00000637450 VPREB1P12018 145 aa10.76□□□□□ -0.69
CLN6-220ENST00000637450 ZNF22P17026 224 aaPredicted RBP10.76□□□□□ -0.69
CLN6-220ENST00000637450 NDUFA6P56556 154 aa10.76□□□□□ -0.69
CLN6-220ENST00000637450 SND1-IT1Q9HBX3 110 aa10.76□□□□□ -0.69
CLN6-220ENST00000637450 ERG28Q9UKR5 140 aa10.75□□□□□ -0.69
CLN6-220ENST00000637450 COX17Q14061 63 aa10.74□□□□□ -0.69
CLN6-220ENST00000637450 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
CLN6-220ENST00000637450 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
CLN6-220ENST00000637450 FAT4Q6V0I7 4981 aa10.74□□□□□ -0.69
CLN6-220ENST00000637450 LINC00614P0C842 121 aa10.73□□□□□ -0.69
CLN6-220ENST00000637450 PRLHP81277 87 aa10.73□□□□□ -0.69
CLN6-220ENST00000637450 RPL24P83731 157 aaKnown RBP10.73□□□□□ -0.69
CLN6-220ENST00000637450 C10orf91Q5T1B1 145 aa10.73□□□□□ -0.69
CLN6-220ENST00000637450 FAM19A1Q7Z5A9 133 aa10.73□□□□□ -0.69
CLN6-220ENST00000637450 LINC00304Q8N9R0 145 aa10.73□□□□□ -0.69
CLN6-220ENST00000637450 A0A0U1RQV1 116 aa10.72□□□□□ -0.69
CLN6-220ENST00000637450 TMEM238C9JI98 176 aa10.72□□□□□ -0.69
CLN6-220ENST00000637450 RPS10P5Q9NQ39 176 aa10.72□□□□□ -0.69
CLN6-220ENST00000637450 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.69
CLN6-220ENST00000637450 M0R378 163 aa10.71□□□□□ -0.69
CLN6-220ENST00000637450 RHEBQ15382 184 aa10.71□□□□□ -0.69
CLN6-220ENST00000637450 Q8NDZ9 215 aa10.71□□□□□ -0.69
CLN6-220ENST00000637450 C18orf32Q8TCD1 76 aa10.71□□□□□ -0.69
CLN6-220ENST00000637450 ZNF625Q96I27 306 aaPredicted RBP10.71□□□□□ -0.69
CLN6-220ENST00000637450 RETNLBQ9BQ08 111 aa10.71□□□□□ -0.69
CLN6-220ENST00000637450 MUC17Q685J3 4493 aa10.7□□□□□ -0.7
CLN6-220ENST00000637450 HBDP02042 147 aa10.7□□□□□ -0.7
CLN6-220ENST00000637450 COMMD7Q86VX2 200 aa10.7□□□□□ -0.7
CLN6-220ENST00000637450 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms