RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 H0YGX0 51 aa10.17□□□□□ -0.78
CLN6-215ENST00000636674 RPL35AP18077 110 aaKnown RBP10.17□□□□□ -0.78
CLN6-215ENST00000636674 CCL18P55774 89 aa10.17□□□□□ -0.78
CLN6-215ENST00000636674 LINC01006Q8NI28 216 aa10.17□□□□□ -0.78
CLN6-215ENST00000636674 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
CLN6-215ENST00000636674 SMIM11BQ8TCY0 68 aa10.17□□□□□ -0.78
CLN6-215ENST00000636674 LINC00158P58513 81 aa10.16□□□□□ -0.78
CLN6-215ENST00000636674 CHCHD5Q9BSY4 110 aa10.16□□□□□ -0.78
CLN6-215ENST00000636674 RNASE1P07998 156 aaKnown RBP10.16□□□□□ -0.78
CLN6-215ENST00000636674 NOTCH3Q9UM47 2321 aa10.15□□□□□ -0.78
CLN6-215ENST00000636674 INAFM1C9JVW0 142 aa10.15□□□□□ -0.78
CLN6-215ENST00000636674 CXCL5P42830 114 aa10.15□□□□□ -0.78
CLN6-215ENST00000636674 LINC00612Q8N6U2 182 aa10.15□□□□□ -0.78
CLN6-215ENST00000636674 KIR2DL5BQ8NHK3 375 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 Q9HAA7 133 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 FAM236AA0A1B0GUQ0 79 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 FAM236BA0A1B0GV22 79 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 DNAL4O96015 105 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 ATP5G1P05496 136 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 OBSCN-AS1Q96MR7 158 aa10.14□□□□□ -0.79
CLN6-215ENST00000636674 A0A087WYN8 130 aa10.13□□□□□ -0.79
CLN6-215ENST00000636674 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
CLN6-215ENST00000636674 LINC01561Q8N1V8 128 aa10.13□□□□□ -0.79
CLN6-215ENST00000636674 C5orf38Q86SI9 138 aa10.12□□□□□ -0.79
CLN6-215ENST00000636674 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
CLN6-215ENST00000636674 Q8IZM0 81 aa10.11□□□□□ -0.79
CLN6-215ENST00000636674 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
CLN6-215ENST00000636674 GAGE2AQ6NT46 116 aa10.1□□□□□ -0.79
CLN6-215ENST00000636674 PFN2P35080 140 aa10.09□□□□□ -0.79
CLN6-215ENST00000636674 KRTAP21-3Q3LHN1 58 aa10.09□□□□□ -0.79
CLN6-215ENST00000636674 PAX4O43316 350 aa10.08□□□□□ -0.8
CLN6-215ENST00000636674 SS18Q15532 418 aa10.08□□□□□ -0.8
CLN6-215ENST00000636674 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
CLN6-215ENST00000636674 KLK5Q9Y337 293 aaPredicted RBP10.07□□□□□ -0.8
CLN6-215ENST00000636674 LECT2O14960 151 aa10.07□□□□□ -0.8
CLN6-215ENST00000636674 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
CLN6-215ENST00000636674 GYPEP15421 78 aa10.06□□□□□ -0.8
CLN6-215ENST00000636674 HIST1H4AP62805 103 aaKnown RBP10.06□□□□□ -0.8
CLN6-215ENST00000636674 LINC00167Q96N53 147 aa10.06□□□□□ -0.8
CLN6-215ENST00000636674 A0A1B0GX51 115 aa10.06□□□□□ -0.8
CLN6-215ENST00000636674 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
CLN6-215ENST00000636674 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
CLN6-215ENST00000636674 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
CLN6-215ENST00000636674 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 XCL1P47992 114 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 OR13C6PQ8NH95 151 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 C14orf132Q9NPU4 83 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 PRO0255Q9UI72 69 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 UQCRQO14949 82 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 NDUFC2O95298 119 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 Q6JHZ5 121 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 X6R8D5 127 aa10.04□□□□□ -0.8
CLN6-215ENST00000636674 HILS1P60008 231 aa10.03□□□□□ -0.8
CLN6-215ENST00000636674 COX17Q14061 63 aa10.03□□□□□ -0.8
CLN6-215ENST00000636674 ORMDL1Q9P0S3 153 aa10.03□□□□□ -0.8
CLN6-215ENST00000636674 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.81
CLN6-215ENST00000636674 C11orf68Q9H3H3 251 aaKnown RBP10.02□□□□□ -0.81
CLN6-215ENST00000636674 NANOS2P60321 138 aaKnown RBP10.01□□□□□ -0.81
CLN6-215ENST00000636674 KIAA0087Q14695 138 aa10.01□□□□□ -0.81
CLN6-215ENST00000636674 IGHV4-28A0A0C4DH34 117 aa10□□□□□ -0.81
CLN6-215ENST00000636674 CD164L2Q6UWJ8 174 aa10□□□□□ -0.81
CLN6-215ENST00000636674 CUBNO60494 3623 aa10□□□□□ -0.81
CLN6-215ENST00000636674 LYRM9A8MSI8 78 aa10□□□□□ -0.81
CLN6-215ENST00000636674 ATOX1O00244 68 aa10□□□□□ -0.81
CLN6-215ENST00000636674 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
CLN6-215ENST00000636674 LINC00846Q9NV44 126 aa10□□□□□ -0.81
CLN6-215ENST00000636674 ATRQ13535 2644 aa9.99□□□□□ -0.81
CLN6-215ENST00000636674 NCR3O14931 201 aa9.99□□□□□ -0.81
CLN6-215ENST00000636674 COX7CP15954 63 aa9.99□□□□□ -0.81
CLN6-215ENST00000636674 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
CLN6-215ENST00000636674 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
CLN6-215ENST00000636674 JMJD7-PLA2G4BH0Y9G9 81 aa9.97□□□□□ -0.81
CLN6-215ENST00000636674 SLPIP03973 132 aa9.97□□□□□ -0.81
CLN6-215ENST00000636674 CLPSL2Q6UWE3 100 aa9.97□□□□□ -0.81
CLN6-215ENST00000636674 Q8N814 137 aa9.97□□□□□ -0.81
CLN6-215ENST00000636674 CCKP06307 115 aa9.97□□□□□ -0.81
CLN6-215ENST00000636674 SMIM20Q8N5G0 67 aa9.97□□□□□ -0.81
CLN6-215ENST00000636674 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.81
CLN6-215ENST00000636674 MUC7Q8TAX7 377 aa9.96□□□□□ -0.81
CLN6-215ENST00000636674 CHCHD10Q8WYQ3 142 aaPredicted RBP9.96□□□□□ -0.81
CLN6-215ENST00000636674 LINC00269Q8N2A0 174 aa9.95□□□□□ -0.82
CLN6-215ENST00000636674 TMEM256-PLSCR3K7ERE1 68 aa9.95□□□□□ -0.82
CLN6-215ENST00000636674 KRTAP10-3P60369 221 aa9.95□□□□□ -0.82
CLN6-215ENST00000636674 CRYGAP11844 174 aa9.94□□□□□ -0.82
CLN6-215ENST00000636674 A0A096LPF7 62 aa9.94□□□□□ -0.82
CLN6-215ENST00000636674 REG3AQ06141 175 aa9.94□□□□□ -0.82
CLN6-215ENST00000636674 COL6A5A8TX70 2615 aa9.93□□□□□ -0.82
CLN6-215ENST00000636674 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
CLN6-215ENST00000636674 IGKV3D-7A0A0C4DH55 119 aa9.92□□□□□ -0.82
CLN6-215ENST00000636674 ATP5EP2Q5VTU8 51 aa9.92□□□□□ -0.82
CLN6-215ENST00000636674 C3orf56Q8N813 242 aa9.92□□□□□ -0.82
CLN6-215ENST00000636674 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
CLN6-215ENST00000636674 FBN1P35555 2871 aaKnown RBP9.91□□□□□ -0.82
CLN6-215ENST00000636674 ANGP03950 147 aaKnown RBP9.91□□□□□ -0.82
CLN6-215ENST00000636674 DNHD1Q96M86 4753 aa9.91□□□□□ -0.82
CLN6-215ENST00000636674 MDFIQ99750 246 aa9.9□□□□□ -0.82
CLN6-215ENST00000636674 C9orf66Q5T8R8 295 aa9.89□□□□□ -0.83
CLN6-215ENST00000636674 LYPD5Q6UWN5 251 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms