RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 WFDC10AQ9H1F0 79 aa10.21□□□□□ -0.77
CACNA1A-220ENST00000635988 USP9YO00507 2555 aaPredicted RBP10.21□□□□□ -0.78
CACNA1A-220ENST00000635988 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.78
CACNA1A-220ENST00000635988 IGLV1-51P01701 117 aa10.21□□□□□ -0.78
CACNA1A-220ENST00000635988 PLA2G2AP14555 144 aa10.21□□□□□ -0.78
CACNA1A-220ENST00000635988 GYPEP15421 78 aa10.21□□□□□ -0.78
CACNA1A-220ENST00000635988 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.78
CACNA1A-220ENST00000635988 FAM19A1Q7Z5A9 133 aa10.21□□□□□ -0.78
CACNA1A-220ENST00000635988 KIAA0087Q14695 138 aa10.2□□□□□ -0.78
CACNA1A-220ENST00000635988 C6orf99Q4VX62 202 aa10.2□□□□□ -0.78
CACNA1A-220ENST00000635988 CD164L2Q6UWJ8 174 aa10.2□□□□□ -0.78
CACNA1A-220ENST00000635988 LOC110117498A0A087WWA1 95 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 DNAJC9-AS1A6NH13 148 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 ZNF561-AS1K7EIQ3 104 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 RBM3P98179 157 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 DEFB113Q30KQ7 82 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 LINC00575Q6W349 94 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 LINC00612Q8N6U2 182 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 WFDC9Q8NEX5 89 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 ITPR1Q14643 2758 aa10.19□□□□□ -0.78
CACNA1A-220ENST00000635988 DEFB130BP0DP73 79 aa10.18□□□□□ -0.78
CACNA1A-220ENST00000635988 DEFB130AP0DP74 79 aa10.18□□□□□ -0.78
CACNA1A-220ENST00000635988 H3BQ85 93 aa10.18□□□□□ -0.78
CACNA1A-220ENST00000635988 Q6ZQT0 140 aa10.18□□□□□ -0.78
CACNA1A-220ENST00000635988 CHD8Q9HCK8 2581 aa10.18□□□□□ -0.78
CACNA1A-220ENST00000635988 OXTP01178 125 aa10.17□□□□□ -0.78
CACNA1A-220ENST00000635988 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
CACNA1A-220ENST00000635988 ANKRD17O75179 2603 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-220ENST00000635988 RNASE1P07998 156 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-220ENST00000635988 C4orf26Q17RF5 130 aa10.17□□□□□ -0.78
CACNA1A-220ENST00000635988 Q5XG85 94 aa10.17□□□□□ -0.78
CACNA1A-220ENST00000635988 CLPSL2Q6UWE3 100 aa10.16□□□□□ -0.78
CACNA1A-220ENST00000635988 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
CACNA1A-220ENST00000635988 PDE6GP18545 87 aa10.16□□□□□ -0.78
CACNA1A-220ENST00000635988 C20orf197Q8N268 126 aa10.16□□□□□ -0.78
CACNA1A-220ENST00000635988 C6orf223Q8N319 242 aa10.16□□□□□ -0.78
CACNA1A-220ENST00000635988 MXRA5Q9NR99 2828 aa10.16□□□□□ -0.78
CACNA1A-220ENST00000635988 TRAV7A0A075B6U4 112 aa10.15□□□□□ -0.78
CACNA1A-220ENST00000635988 NOTCH3Q9UM47 2321 aa10.15□□□□□ -0.78
CACNA1A-220ENST00000635988 HRCT1Q6UXD1 115 aa10.15□□□□□ -0.78
CACNA1A-220ENST00000635988 MYO9AB2RTY4 2548 aa10.15□□□□□ -0.79
CACNA1A-220ENST00000635988 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-220ENST00000635988 LINC00269Q8N2A0 174 aa10.14□□□□□ -0.79
CACNA1A-220ENST00000635988 LAMTOR3Q9UHA4 124 aa10.14□□□□□ -0.79
CACNA1A-220ENST00000635988 SPTBN4Q9H254 2564 aa10.14□□□□□ -0.79
CACNA1A-220ENST00000635988 USP9XQ93008 2570 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-220ENST00000635988 ZANQ9Y493 2812 aa10.13□□□□□ -0.79
CACNA1A-220ENST00000635988 FAM236DA0A1B0GTK5 79 aa10.13□□□□□ -0.79
CACNA1A-220ENST00000635988 FAM236CP0DP71 79 aa10.13□□□□□ -0.79
CACNA1A-220ENST00000635988 WNK1Q9H4A3 2382 aa10.12□□□□□ -0.79
CACNA1A-220ENST00000635988 LINC01547P58512 204 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-220ENST00000635988 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
CACNA1A-220ENST00000635988 C9orf116Q5BN46 136 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-220ENST00000635988 KRTAP10-9P60411 292 aa10.1□□□□□ -0.79
CACNA1A-220ENST00000635988 CXCL6P80162 114 aa10.1□□□□□ -0.79
CACNA1A-220ENST00000635988 REG3AQ06141 175 aa10.1□□□□□ -0.79
CACNA1A-220ENST00000635988 C16orf95Q9H693 158 aa10.1□□□□□ -0.79
CACNA1A-220ENST00000635988 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
CACNA1A-220ENST00000635988 LINC01006Q8NI28 216 aa10.1□□□□□ -0.79
CACNA1A-220ENST00000635988 BBC3Q96PG8 261 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-220ENST00000635988 ANGP03950 147 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 Q6ZVQ6 151 aa10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 ESM1Q9NQ30 184 aa10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 CHD6Q8TD26 2715 aa10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 HAMPP81172 84 aa10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 KLKP1Q107X0 134 aa10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 Q8NDZ9 215 aa10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 SERP1Q9Y6X1 66 aa10.09□□□□□ -0.79
CACNA1A-220ENST00000635988 IGLV6-57P01721 117 aa10.08□□□□□ -0.8
CACNA1A-220ENST00000635988 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
CACNA1A-220ENST00000635988 A0A096LPF7 62 aa10.08□□□□□ -0.8
CACNA1A-220ENST00000635988 PKD1L2Q7Z442 2459 aa10.08□□□□□ -0.8
CACNA1A-220ENST00000635988 H7BZZ5 65 aa10.07□□□□□ -0.8
CACNA1A-220ENST00000635988 A0A0J9YWU9 116 aa10.07□□□□□ -0.8
CACNA1A-220ENST00000635988 IGHV4-30-4P0DP06 118 aa10.07□□□□□ -0.8
CACNA1A-220ENST00000635988 LYRM9A8MSI8 78 aa10.06□□□□□ -0.8
CACNA1A-220ENST00000635988 EPM2AB3EWF7 344 aa10.06□□□□□ -0.8
CACNA1A-220ENST00000635988 Q6ZQY7 126 aa10.06□□□□□ -0.8
CACNA1A-220ENST00000635988 FLNCQ14315 2725 aa10.06□□□□□ -0.8
CACNA1A-220ENST00000635988 SPAG11BQ08648 103 aa10.06□□□□□ -0.8
CACNA1A-220ENST00000635988 X6R8D5 127 aa10.06□□□□□ -0.8
CACNA1A-220ENST00000635988 KRTAP1-3Q8IUG1 177 aa10.05□□□□□ -0.8
CACNA1A-220ENST00000635988 CFAP46Q8IYW2 2715 aa10.05□□□□□ -0.8
CACNA1A-220ENST00000635988 POLQO75417 2590 aa10.04□□□□□ -0.8
CACNA1A-220ENST00000635988 UNQ6190/PRO20217Q6UXQ8 127 aa10.04□□□□□ -0.8
CACNA1A-220ENST00000635988 TLN2Q9Y4G6 2542 aa10.04□□□□□ -0.8
CACNA1A-220ENST00000635988 M0R2N4 97 aa10.04□□□□□ -0.8
CACNA1A-220ENST00000635988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-220ENST00000635988 CSMD2Q7Z408 3487 aa10.04□□□□□ -0.8
CACNA1A-220ENST00000635988 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
CACNA1A-220ENST00000635988 PRO0628Q9UI54 55 aa10.03□□□□□ -0.8
CACNA1A-220ENST00000635988 FBN2P35556 2912 aa10.03□□□□□ -0.8
CACNA1A-220ENST00000635988 NDUFC1O43677 76 aa10.03□□□□□ -0.8
CACNA1A-220ENST00000635988 C10orf25Q5T742 122 aa10.03□□□□□ -0.8
CACNA1A-220ENST00000635988 TEX15Q9BXT5 2789 aa10.03□□□□□ -0.8
CACNA1A-220ENST00000635988 ACACBO00763 2458 aa10.03□□□□□ -0.8
CACNA1A-220ENST00000635988 ZNF843Q8N446 348 aa10.02□□□□□ -0.8
CACNA1A-220ENST00000635988 UTP20O75691 2785 aaKnown RBP10.02□□□□□ -0.8
CACNA1A-220ENST00000635988 GVQW2A0A096LPI5 108 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms