RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
CACNA1A-219ENST00000635917 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
CACNA1A-219ENST00000635917 SPCS1Q9Y6A9 102 aa8.48□□□□□ -1.05
CACNA1A-219ENST00000635917 IGHV3-33P01772 117 aa8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 Q8IZM0 81 aa8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 IGLV10-54A0A075B6I4 117 aa8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 LINC00308Q8TCZ7 52 aa8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
CACNA1A-219ENST00000635917 GTF2H5Q6ZYL4 71 aa8.46□□□□□ -1.06
CACNA1A-219ENST00000635917 TRAV10A0A0B4J240 114 aa8.45□□□□□ -1.06
CACNA1A-219ENST00000635917 COX7A2LO14548 114 aa8.45□□□□□ -1.06
CACNA1A-219ENST00000635917 NPC2P61916 151 aa8.45□□□□□ -1.06
CACNA1A-219ENST00000635917 DNHD1Q96M86 4753 aa8.45□□□□□ -1.06
CACNA1A-219ENST00000635917 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
CACNA1A-219ENST00000635917 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
CACNA1A-219ENST00000635917 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
CACNA1A-219ENST00000635917 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
CACNA1A-219ENST00000635917 KRTAP26-1Q6PEX3 210 aa8.44□□□□□ -1.06
CACNA1A-219ENST00000635917 DNAH1Q9P2D7 4330 aa8.43□□□□□ -1.06
CACNA1A-219ENST00000635917 PRKDCP78527 4128 aaKnown RBP8.43□□□□□ -1.06
CACNA1A-219ENST00000635917 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
CACNA1A-219ENST00000635917 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
CACNA1A-219ENST00000635917 C15orf53Q8NAA6 179 aa8.43□□□□□ -1.06
CACNA1A-219ENST00000635917 DYNC2H1Q8NCM8 4307 aaKnown RBP8.42□□□□□ -1.06
CACNA1A-219ENST00000635917 TRAV8-4A0A0B4J246 113 aa8.42□□□□□ -1.06
CACNA1A-219ENST00000635917 GAGE12HA6NDE8 117 aa8.42□□□□□ -1.06
CACNA1A-219ENST00000635917 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
CACNA1A-219ENST00000635917 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
CACNA1A-219ENST00000635917 KLK5Q9Y337 293 aaPredicted RBP8.42□□□□□ -1.06
CACNA1A-219ENST00000635917 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
CACNA1A-219ENST00000635917 UBE2WQ96B02 151 aa8.4□□□□□ -1.06
CACNA1A-219ENST00000635917 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
CACNA1A-219ENST00000635917 H3BMG7 143 aa8.4□□□□□ -1.07
CACNA1A-219ENST00000635917 DNAH10OSP0CZ25 163 aa8.4□□□□□ -1.07
CACNA1A-219ENST00000635917 COPS9Q8WXC6 57 aa8.4□□□□□ -1.07
CACNA1A-219ENST00000635917 CSMD3Q7Z407 3707 aa8.39□□□□□ -1.07
CACNA1A-219ENST00000635917 TRBV30A0A0K0K1B3 111 aa8.39□□□□□ -1.07
CACNA1A-219ENST00000635917 CXCL5P42830 114 aa8.39□□□□□ -1.07
CACNA1A-219ENST00000635917 PRO0461Q9UI25 63 aa8.39□□□□□ -1.07
CACNA1A-219ENST00000635917 LOC107984156A0A0G2JMH3 177 aa8.38□□□□□ -1.07
CACNA1A-219ENST00000635917 CRPP02741 224 aa8.38□□□□□ -1.07
CACNA1A-219ENST00000635917 MALP21145 153 aa8.38□□□□□ -1.07
CACNA1A-219ENST00000635917 ARL17AQ8IVW1 177 aa8.38□□□□□ -1.07
CACNA1A-219ENST00000635917 LINC00588Q9Y4M8 146 aa8.38□□□□□ -1.07
CACNA1A-219ENST00000635917 CCL18P55774 89 aa8.38□□□□□ -1.07
CACNA1A-219ENST00000635917 LINC00158P58513 81 aa8.38□□□□□ -1.07
CACNA1A-219ENST00000635917 LYSTQ99698 3801 aa8.37□□□□□ -1.07
CACNA1A-219ENST00000635917 TCL1BO95988 128 aa8.37□□□□□ -1.07
CACNA1A-219ENST00000635917 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 TRIAP1O43715 76 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 PFN2P35080 140 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 CKS1BP61024 79 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 COX17Q14061 63 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 LYRM7Q5U5X0 104 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 H7C2G1 150 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 C10orf25Q5T742 122 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
CACNA1A-219ENST00000635917 SPAG11BQ08648 103 aa8.35□□□□□ -1.07
CACNA1A-219ENST00000635917 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
CACNA1A-219ENST00000635917 UPK3BQ9BT76 320 aa8.35□□□□□ -1.07
CACNA1A-219ENST00000635917 MEGF8Q7Z7M0 2845 aa8.35□□□□□ -1.07
CACNA1A-219ENST00000635917 F8W1H4 67 aa8.34□□□□□ -1.07
CACNA1A-219ENST00000635917 C9orf116Q5BN46 136 aaPredicted RBP8.34□□□□□ -1.07
CACNA1A-219ENST00000635917 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
CACNA1A-219ENST00000635917 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
CACNA1A-219ENST00000635917 LINC00526Q96FQ7 95 aa8.34□□□□□ -1.07
CACNA1A-219ENST00000635917 SND1-IT1Q9HBX3 110 aa8.34□□□□□ -1.07
CACNA1A-219ENST00000635917 GVQW2A0A096LPI5 108 aaPredicted RBP8.33□□□□□ -1.08
CACNA1A-219ENST00000635917 PSMB2P49721 201 aa8.33□□□□□ -1.08
CACNA1A-219ENST00000635917 UNQ6190/PRO20217Q6UXQ8 127 aa8.33□□□□□ -1.08
CACNA1A-219ENST00000635917 WFDC2Q14508 124 aa8.33□□□□□ -1.08
CACNA1A-219ENST00000635917 Q1RN00 199 aa8.33□□□□□ -1.08
CACNA1A-219ENST00000635917 C15orf56Q8N910 161 aa8.33□□□□□ -1.08
CACNA1A-219ENST00000635917 TENM2Q9NT68 2774 aa8.33□□□□□ -1.08
CACNA1A-219ENST00000635917 DNAH7Q8WXX0 4024 aa8.32□□□□□ -1.08
CACNA1A-219ENST00000635917 PLECQ15149 4684 aaKnown RBP8.32□□□□□ -1.08
CACNA1A-219ENST00000635917 SCGB1C2P0DMR2 95 aa8.31□□□□□ -1.08
CACNA1A-219ENST00000635917 MTURNQ8N3F0 131 aa8.31□□□□□ -1.08
CACNA1A-219ENST00000635917 C1orf43Q9BWL3 253 aa8.31□□□□□ -1.08
CACNA1A-219ENST00000635917 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
CACNA1A-219ENST00000635917 MUC7Q8TAX7 377 aa8.3□□□□□ -1.08
CACNA1A-219ENST00000635917 C6orf48Q9UBA6 75 aa8.3□□□□□ -1.08
CACNA1A-219ENST00000635917 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
CACNA1A-219ENST00000635917 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
CACNA1A-219ENST00000635917 NDUFC2O95298 119 aa8.29□□□□□ -1.08
CACNA1A-219ENST00000635917 Q8NDZ9 215 aa8.29□□□□□ -1.08
CACNA1A-219ENST00000635917 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
CACNA1A-219ENST00000635917 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
CACNA1A-219ENST00000635917 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
CACNA1A-219ENST00000635917 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
CACNA1A-219ENST00000635917 DNAH10Q8IVF4 4471 aa8.27□□□□□ -1.09
CACNA1A-219ENST00000635917 LST1O00453 97 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms