RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 PRR26Q8N8Z3 221 aa7.53□□□□□ -1.2
SOX2-OT-247ENST00000628347 IGIPA6NJ69 53 aa7.52□□□□□ -1.21
SOX2-OT-247ENST00000628347 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.21
SOX2-OT-247ENST00000628347 UBE2BP63146 152 aa7.52□□□□□ -1.21
SOX2-OT-247ENST00000628347 Q8IZM0 81 aa7.52□□□□□ -1.21
SOX2-OT-247ENST00000628347 VCX2Q9H322 139 aa7.52□□□□□ -1.21
SOX2-OT-247ENST00000628347 ZC2HC1BQ5TFG8 222 aa7.51□□□□□ -1.21
SOX2-OT-247ENST00000628347 NXT2Q9NPJ8 142 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-247ENST00000628347 PRSS2P07478 247 aa7.5□□□□□ -1.21
SOX2-OT-247ENST00000628347 HERVK_113P63121 156 aa7.5□□□□□ -1.21
SOX2-OT-247ENST00000628347 SEC11AP67812 179 aa7.5□□□□□ -1.21
SOX2-OT-247ENST00000628347 PAPPA-AS1Q5QFB9 102 aa7.5□□□□□ -1.21
SOX2-OT-247ENST00000628347 G0S2P27469 103 aa7.49□□□□□ -1.21
SOX2-OT-247ENST00000628347 CKS1BP61024 79 aa7.49□□□□□ -1.21
SOX2-OT-247ENST00000628347 C6orf226Q5I0X4 101 aa7.49□□□□□ -1.21
SOX2-OT-247ENST00000628347 TIMM17AQ99595 171 aa7.49□□□□□ -1.21
SOX2-OT-247ENST00000628347 NUPR1O60356 82 aa7.48□□□□□ -1.21
SOX2-OT-247ENST00000628347 ALKBH7Q9BT30 221 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-247ENST00000628347 CTDSP1Q9GZU7 261 aa7.48□□□□□ -1.21
SOX2-OT-247ENST00000628347 TOMM7Q9P0U1 55 aa7.48□□□□□ -1.21
SOX2-OT-247ENST00000628347 CARHSP1Q9Y2V2 147 aaKnown RBP7.48□□□□□ -1.21
SOX2-OT-247ENST00000628347 ZNF861PO60384 105 aa7.47□□□□□ -1.21
SOX2-OT-247ENST00000628347 RPL13AP40429 203 aaKnown RBP7.47□□□□□ -1.21
SOX2-OT-247ENST00000628347 RAB14P61106 215 aa7.47□□□□□ -1.21
SOX2-OT-247ENST00000628347 TOMM6Q96B49 74 aa7.47□□□□□ -1.21
SOX2-OT-247ENST00000628347 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
SOX2-OT-247ENST00000628347 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
SOX2-OT-247ENST00000628347 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
SOX2-OT-247ENST00000628347 F8VRH5 84 aa7.46□□□□□ -1.22
SOX2-OT-247ENST00000628347 CXCL5P42830 114 aa7.46□□□□□ -1.22
SOX2-OT-247ENST00000628347 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.22
SOX2-OT-247ENST00000628347 TP73-AS1Q9UF72 201 aa7.46□□□□□ -1.22
SOX2-OT-247ENST00000628347 TRAV9-1A0A075B6T8 112 aa7.45□□□□□ -1.22
SOX2-OT-247ENST00000628347 LINC00469Q8N7U9 141 aa7.45□□□□□ -1.22
SOX2-OT-247ENST00000628347 GEMIN7Q9H840 131 aaKnown RBP7.45□□□□□ -1.22
SOX2-OT-247ENST00000628347 LINC01549A6NIU2 74 aa7.44□□□□□ -1.22
SOX2-OT-247ENST00000628347 ERASQ7Z444 233 aa7.44□□□□□ -1.22
SOX2-OT-247ENST00000628347 XAGE1AQ9HD64 81 aa7.44□□□□□ -1.22
SOX2-OT-247ENST00000628347 IGLV5-45A0A087WSX0 123 aa7.43□□□□□ -1.22
SOX2-OT-247ENST00000628347 TINCRA0A1B0GVN0 87 aa7.43□□□□□ -1.22
SOX2-OT-247ENST00000628347 LINC01546A6NGU7 62 aa7.43□□□□□ -1.22
SOX2-OT-247ENST00000628347 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
SOX2-OT-247ENST00000628347 PDZD11Q5EBL8 140 aa7.43□□□□□ -1.22
SOX2-OT-247ENST00000628347 CLLU1Q5K131 121 aa7.43□□□□□ -1.22
SOX2-OT-247ENST00000628347 KIAA1644Q3SXP7 199 aa7.42□□□□□ -1.22
SOX2-OT-247ENST00000628347 MRPL55Q7Z7F7 128 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-247ENST00000628347 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
SOX2-OT-247ENST00000628347 ADCYAP1P18509 176 aa7.41□□□□□ -1.22
SOX2-OT-247ENST00000628347 UQCC3Q6UW78 93 aa7.41□□□□□ -1.22
SOX2-OT-247ENST00000628347 COX7B2Q8TF08 81 aa7.41□□□□□ -1.22
SOX2-OT-247ENST00000628347 BCE1O60756 84 aa7.4□□□□□ -1.22
SOX2-OT-247ENST00000628347 RPL28P46779 137 aaKnown RBP7.4□□□□□ -1.22
SOX2-OT-247ENST00000628347 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
SOX2-OT-247ENST00000628347 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
SOX2-OT-247ENST00000628347 TMEM218A2RU14 115 aa7.39□□□□□ -1.23
SOX2-OT-247ENST00000628347 COX19Q49B96 90 aa7.38□□□□□ -1.23
SOX2-OT-247ENST00000628347 LINC00167Q96N53 147 aa7.38□□□□□ -1.23
SOX2-OT-247ENST00000628347 CST9LQ9H4G1 147 aa7.38□□□□□ -1.23
SOX2-OT-247ENST00000628347 MUC2Q02817 5179 aa7.37□□□□□ -1.23
SOX2-OT-247ENST00000628347 S100PP25815 95 aa7.37□□□□□ -1.23
SOX2-OT-247ENST00000628347 PMVKQ15126 192 aa7.37□□□□□ -1.23
SOX2-OT-247ENST00000628347 PRR4Q16378 134 aa7.37□□□□□ -1.23
SOX2-OT-247ENST00000628347 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
SOX2-OT-247ENST00000628347 MUC17Q685J3 4493 aa7.37□□□□□ -1.23
SOX2-OT-247ENST00000628347 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
SOX2-OT-247ENST00000628347 SEC11CQ9BY50 192 aa7.36□□□□□ -1.23
SOX2-OT-247ENST00000628347 A0A087X002 238 aa7.35□□□□□ -1.23
SOX2-OT-247ENST00000628347 CRYGAP11844 174 aa7.35□□□□□ -1.23
SOX2-OT-247ENST00000628347 FA2HQ7L5A8 372 aa7.35□□□□□ -1.23
SOX2-OT-247ENST00000628347 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
SOX2-OT-247ENST00000628347 IGLV5-39A0A0G2JS06 123 aa7.34□□□□□ -1.23
SOX2-OT-247ENST00000628347 RPL37AP8A6NKH3 93 aa7.34□□□□□ -1.23
SOX2-OT-247ENST00000628347 H3BRM9 83 aa7.34□□□□□ -1.23
SOX2-OT-247ENST00000628347 ATP5LO75964 103 aa7.33□□□□□ -1.24
SOX2-OT-247ENST00000628347 IGLC3P0DOY3 106 aa7.33□□□□□ -1.24
SOX2-OT-247ENST00000628347 RAB5BP61020 215 aa7.33□□□□□ -1.24
SOX2-OT-247ENST00000628347 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
SOX2-OT-247ENST00000628347 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
SOX2-OT-247ENST00000628347 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
SOX2-OT-247ENST00000628347 SMCO4Q9NRQ5 59 aa7.33□□□□□ -1.24
SOX2-OT-247ENST00000628347 GAGE10A6NGK3 116 aa7.32□□□□□ -1.24
SOX2-OT-247ENST00000628347 IFITM2Q01629 132 aa7.32□□□□□ -1.24
SOX2-OT-247ENST00000628347 FABP9Q0Z7S8 132 aa7.32□□□□□ -1.24
SOX2-OT-247ENST00000628347 A0A096LNJ9 63 aa7.31□□□□□ -1.24
SOX2-OT-247ENST00000628347 TSPAN13O95857 204 aa7.31□□□□□ -1.24
SOX2-OT-247ENST00000628347 UBE2AP49459 152 aa7.31□□□□□ -1.24
SOX2-OT-247ENST00000628347 FAM229BQ4G0N7 80 aa7.31□□□□□ -1.24
SOX2-OT-247ENST00000628347 C10orf91Q5T1B1 145 aa7.31□□□□□ -1.24
SOX2-OT-247ENST00000628347 ZNF22P17026 224 aaPredicted RBP7.3□□□□□ -1.24
SOX2-OT-247ENST00000628347 KRTAP13-2Q52LG2 175 aa7.3□□□□□ -1.24
SOX2-OT-247ENST00000628347 VPREB1P12018 145 aa7.29□□□□□ -1.24
SOX2-OT-247ENST00000628347 COX17Q14061 63 aa7.29□□□□□ -1.24
SOX2-OT-247ENST00000628347 RHEBQ15382 184 aa7.29□□□□□ -1.24
SOX2-OT-247ENST00000628347 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
SOX2-OT-247ENST00000628347 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
SOX2-OT-247ENST00000628347 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
SOX2-OT-247ENST00000628347 PFN2P35080 140 aa7.28□□□□□ -1.24
SOX2-OT-247ENST00000628347 CTAG1AP78358 180 aa7.28□□□□□ -1.24
SOX2-OT-247ENST00000628347 C4orf48Q5BLP8 95 aa7.28□□□□□ -1.24
SOX2-OT-247ENST00000628347 SND1-IT1Q9HBX3 110 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms