RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 C1orf137Q5JT78 98 aa9.14□□□□□ -0.95
SCN8A-209ENST00000627620 Q6ZSN1 163 aa9.14□□□□□ -0.95
SCN8A-209ENST00000627620 BEAN1Q3B7T3 259 aa9.13□□□□□ -0.95
SCN8A-209ENST00000627620 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
SCN8A-209ENST00000627620 CELA1Q9UNI1 258 aa9.13□□□□□ -0.95
SCN8A-209ENST00000627620 A0A087WYN8 130 aa9.13□□□□□ -0.95
SCN8A-209ENST00000627620 PTPRSQ13332 1948 aa9.13□□□□□ -0.95
SCN8A-209ENST00000627620 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
SCN8A-209ENST00000627620 CCDC179H3BU77 68 aa9.12□□□□□ -0.95
SCN8A-209ENST00000627620 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
SCN8A-209ENST00000627620 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
SCN8A-209ENST00000627620 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
SCN8A-209ENST00000627620 RAI1Q7Z5J4 1906 aaPredicted RBP9.11□□□□□ -0.95
SCN8A-209ENST00000627620 JMJD1CQ15652 2540 aa9.1□□□□□ -0.95
SCN8A-209ENST00000627620 ESRGQ1W209 222 aa9.1□□□□□ -0.95
SCN8A-209ENST00000627620 A6NED7 52 aa9.09□□□□□ -0.95
SCN8A-209ENST00000627620 LYPD5Q6UWN5 251 aa9.09□□□□□ -0.95
SCN8A-209ENST00000627620 A0A1B0GUV1 79 aa9.09□□□□□ -0.95
SCN8A-209ENST00000627620 A0A096LNJ9 63 aa9.09□□□□□ -0.95
SCN8A-209ENST00000627620 EML5Q05BV3 1969 aa9.08□□□□□ -0.96
SCN8A-209ENST00000627620 LINC01556Q5JQF7 62 aa9.07□□□□□ -0.96
SCN8A-209ENST00000627620 C2orf48Q96LS8 159 aa9.06□□□□□ -0.96
SCN8A-209ENST00000627620 Q9BRP9 147 aa9.06□□□□□ -0.96
SCN8A-209ENST00000627620 A0A087WVE0 104 aa9.06□□□□□ -0.96
SCN8A-209ENST00000627620 IGHV6-1A0A0B4J1U7 121 aa9.06□□□□□ -0.96
SCN8A-209ENST00000627620 F8WDY8 70 aa9.06□□□□□ -0.96
SCN8A-209ENST00000627620 Q6ZVQ6 151 aa9.06□□□□□ -0.96
SCN8A-209ENST00000627620 LINC00208Q96KT6 92 aa9.06□□□□□ -0.96
SCN8A-209ENST00000627620 EXPH5Q8NEV8 1989 aa9.05□□□□□ -0.96
SCN8A-209ENST00000627620 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
SCN8A-209ENST00000627620 Q6Q795 121 aa9.05□□□□□ -0.96
SCN8A-209ENST00000627620 COL5A1P20908 1838 aaPredicted RBP9.05□□□□□ -0.96
SCN8A-209ENST00000627620 ABCA12Q86UK0 2595 aa9.04□□□□□ -0.96
SCN8A-209ENST00000627620 C1orf134Q5TEV5 83 aa9.04□□□□□ -0.96
SCN8A-209ENST00000627620 CPAMD8Q8IZJ3 1885 aa9.03□□□□□ -0.96
SCN8A-209ENST00000627620 PRYO14603 147 aa9.03□□□□□ -0.96
SCN8A-209ENST00000627620 LINC01547P58512 204 aaPredicted RBP9.03□□□□□ -0.96
SCN8A-209ENST00000627620 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
SCN8A-209ENST00000627620 Q6ZRU5 148 aa9.02□□□□□ -0.97
SCN8A-209ENST00000627620 WDR87Q6ZQQ6 2873 aa9.02□□□□□ -0.97
SCN8A-209ENST00000627620 A0A087WSZ3 146 aa9.02□□□□□ -0.97
SCN8A-209ENST00000627620 LINC01561Q8N1V8 128 aa9.02□□□□□ -0.97
SCN8A-209ENST00000627620 ZFYVE26Q68DK2 2539 aa9.01□□□□□ -0.97
SCN8A-209ENST00000627620 A8MTW9 85 aa9.01□□□□□ -0.97
SCN8A-209ENST00000627620 SRCAPQ6ZRS2 3230 aa9.01□□□□□ -0.97
SCN8A-209ENST00000627620 Q8N3U1 123 aa9.01□□□□□ -0.97
SCN8A-209ENST00000627620 RETNLBQ9BQ08 111 aa9□□□□□ -0.97
SCN8A-209ENST00000627620 KIF25-AS1Q9Y6Z4 181 aa9□□□□□ -0.97
SCN8A-209ENST00000627620 TLN2Q9Y4G6 2542 aa8.99□□□□□ -0.97
SCN8A-209ENST00000627620 C11orf72Q8NBR9 251 aa8.99□□□□□ -0.97
SCN8A-209ENST00000627620 FHL3Q13643 280 aa8.99□□□□□ -0.97
SCN8A-209ENST00000627620 USP9XQ93008 2570 aaPredicted RBP8.99□□□□□ -0.97
SCN8A-209ENST00000627620 DEFB116Q30KQ4 102 aa8.98□□□□□ -0.97
SCN8A-209ENST00000627620 Q8N2B8 174 aa8.98□□□□□ -0.97
SCN8A-209ENST00000627620 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
SCN8A-209ENST00000627620 PRLHP81277 87 aa8.97□□□□□ -0.97
SCN8A-209ENST00000627620 LINC00337Q8N6G1 96 aa8.97□□□□□ -0.97
SCN8A-209ENST00000627620 TRBV7-6A0A0J9YX20 115 aa8.97□□□□□ -0.97
SCN8A-209ENST00000627620 FN1P02751 2386 aaKnown RBP8.97□□□□□ -0.97
SCN8A-209ENST00000627620 AGRNO00468 2067 aa8.96□□□□□ -0.97
SCN8A-209ENST00000627620 PCOTHQ58A44 107 aa8.96□□□□□ -0.97
SCN8A-209ENST00000627620 C22orf24Q9Y442 160 aa8.95□□□□□ -0.98
SCN8A-209ENST00000627620 ADAMTS20P59510 1910 aa8.95□□□□□ -0.98
SCN8A-209ENST00000627620 NHLRC4P0CG21 123 aaPredicted RBP8.95□□□□□ -0.98
SCN8A-209ENST00000627620 LRRK2Q5S007 2527 aa8.95□□□□□ -0.98
SCN8A-209ENST00000627620 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
SCN8A-209ENST00000627620 FSHBP01225 129 aa8.94□□□□□ -0.98
SCN8A-209ENST00000627620 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
SCN8A-209ENST00000627620 IGLV5-39A0A0G2JS06 123 aa8.93□□□□□ -0.98
SCN8A-209ENST00000627620 X6R8D5 127 aa8.93□□□□□ -0.98
SCN8A-209ENST00000627620 CEP295Q9C0D2 2601 aa8.93□□□□□ -0.98
SCN8A-209ENST00000627620 LINC00846Q9NV44 126 aa8.93□□□□□ -0.98
SCN8A-209ENST00000627620 H0Y9P7 68 aa8.93□□□□□ -0.98
SCN8A-209ENST00000627620 TRBV7-7A0A0K0K1E9 115 aa8.92□□□□□ -0.98
SCN8A-209ENST00000627620 SETD2Q9BYW2 2564 aaPredicted RBP8.92□□□□□ -0.98
SCN8A-209ENST00000627620 IGHV3OR16-9A0A0B4J2B5 98 aa8.91□□□□□ -0.98
SCN8A-209ENST00000627620 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
SCN8A-209ENST00000627620 ANKRD11Q6UB99 2663 aaPredicted RBP8.91□□□□□ -0.98
SCN8A-209ENST00000627620 LINC00315P59091 139 aa8.91□□□□□ -0.98
SCN8A-209ENST00000627620 HCG22E2RYF7 251 aa8.91□□□□□ -0.98
SCN8A-209ENST00000627620 FAM19A4Q96LR4 140 aa8.91□□□□□ -0.98
SCN8A-209ENST00000627620 SPINK1P00995 79 aa8.9□□□□□ -0.98
SCN8A-209ENST00000627620 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
SCN8A-209ENST00000627620 MDFIQ99750 246 aa8.9□□□□□ -0.98
SCN8A-209ENST00000627620 LIMD2Q9BT23 127 aa8.89□□□□□ -0.99
SCN8A-209ENST00000627620 TET2Q6N021 2002 aaPredicted RBP8.88□□□□□ -0.99
SCN8A-209ENST00000627620 KIAA0087Q14695 138 aa8.88□□□□□ -0.99
SCN8A-209ENST00000627620 USP9YO00507 2555 aaPredicted RBP8.88□□□□□ -0.99
SCN8A-209ENST00000627620 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
SCN8A-209ENST00000627620 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
SCN8A-209ENST00000627620 LINC00167Q96N53 147 aa8.86□□□□□ -0.99
SCN8A-209ENST00000627620 C6orf48Q9UBA6 75 aa8.86□□□□□ -0.99
SCN8A-209ENST00000627620 CXCL6P80162 114 aa8.85□□□□□ -0.99
SCN8A-209ENST00000627620 EP400Q96L91 3159 aa8.84□□□□□ -0.99
SCN8A-209ENST00000627620 PSPHP1O15172 72 aa8.84□□□□□ -0.99
SCN8A-209ENST00000627620 SPATA3Q8NHX4 192 aa8.84□□□□□ -0.99
SCN8A-209ENST00000627620 PMAIP1Q13794 54 aa8.82□□□□□ -1
SCN8A-209ENST00000627620 PKD1L2Q7Z442 2459 aa8.82□□□□□ -1
SCN8A-209ENST00000627620 CHD8Q9HCK8 2581 aa8.82□□□□□ -1
SCN8A-209ENST00000627620 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms