RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.62
LDB3-208ENST00000623007 PSMB2P49721 201 aa11.15□□□□□ -0.62
LDB3-208ENST00000623007 CLPSL2Q6UWE3 100 aa11.15□□□□□ -0.62
LDB3-208ENST00000623007 KLK12Q9UKR0 248 aa11.15□□□□□ -0.62
LDB3-208ENST00000623007 TRRAPQ9Y4A5 3859 aa11.14□□□□□ -0.63
LDB3-208ENST00000623007 LINC00158P58513 81 aa11.14□□□□□ -0.63
LDB3-208ENST00000623007 FOXI1Q12951 378 aa11.14□□□□□ -0.63
LDB3-208ENST00000623007 LINC01556Q5JQF7 62 aa11.14□□□□□ -0.63
LDB3-208ENST00000623007 STAB1Q9NY15 2570 aa11.13□□□□□ -0.63
LDB3-208ENST00000623007 TRAV13-2A0A0B4J235 113 aa11.13□□□□□ -0.63
LDB3-208ENST00000623007 MIR7-3HGQ8N6C7 128 aa11.11□□□□□ -0.63
LDB3-208ENST00000623007 NBEAL2Q6ZNJ1 2754 aa11.11□□□□□ -0.63
LDB3-208ENST00000623007 GAGE12HA6NDE8 117 aa11.11□□□□□ -0.63
LDB3-208ENST00000623007 K7ERU9 68 aa11.11□□□□□ -0.63
LDB3-208ENST00000623007 ESRGQ1W209 222 aa11.11□□□□□ -0.63
LDB3-208ENST00000623007 ENHOQ6UWT2 76 aa11.11□□□□□ -0.63
LDB3-208ENST00000623007 DAND5Q8N907 189 aa11.11□□□□□ -0.63
LDB3-208ENST00000623007 F8WDY8 70 aa11.1□□□□□ -0.63
LDB3-208ENST00000623007 H3BMG7 143 aa11.1□□□□□ -0.63
LDB3-208ENST00000623007 IGLV10-54A0A075B6I4 117 aa11.09□□□□□ -0.63
LDB3-208ENST00000623007 NPC2P61916 151 aa11.09□□□□□ -0.63
LDB3-208ENST00000623007 KIAA0087Q14695 138 aa11.09□□□□□ -0.63
LDB3-208ENST00000623007 MRAPQ8TCY5 172 aa11.09□□□□□ -0.63
LDB3-208ENST00000623007 EIF4EBP3O60516 100 aaPredicted RBP11.08□□□□□ -0.64
LDB3-208ENST00000623007 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.64
LDB3-208ENST00000623007 CCL18P55774 89 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 ATXN8Q156A1 80 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 WFDC10BQ8IUB3 73 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 A0A0U1RRA0 63 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 B9D2Q9BPU9 175 aa11.08□□□□□ -0.64
LDB3-208ENST00000623007 M0QXV9 152 aa11.07□□□□□ -0.64
LDB3-208ENST00000623007 PRB2P02812 416 aaPredicted RBP11.07□□□□□ -0.64
LDB3-208ENST00000623007 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
LDB3-208ENST00000623007 H7C2G1 150 aa11.06□□□□□ -0.64
LDB3-208ENST00000623007 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
LDB3-208ENST00000623007 Q8N3U1 123 aa11.06□□□□□ -0.64
LDB3-208ENST00000623007 GVQW2A0A096LPI5 108 aaPredicted RBP11.05□□□□□ -0.64
LDB3-208ENST00000623007 J3QR89 54 aa11.05□□□□□ -0.64
LDB3-208ENST00000623007 TCL1BO95988 128 aa11.05□□□□□ -0.64
LDB3-208ENST00000623007 C1orf43Q9BWL3 253 aa11.05□□□□□ -0.64
LDB3-208ENST00000623007 NDUFC2O95298 119 aa11.04□□□□□ -0.64
LDB3-208ENST00000623007 NHLRC4P0CG21 123 aaPredicted RBP11.04□□□□□ -0.64
LDB3-208ENST00000623007 PFN2P35080 140 aa11.04□□□□□ -0.64
LDB3-208ENST00000623007 ANK2Q01484 3957 aa11.04□□□□□ -0.64
LDB3-208ENST00000623007 TRIAP1O43715 76 aa11.04□□□□□ -0.64
LDB3-208ENST00000623007 OCIAD2Q56VL3 154 aa11.04□□□□□ -0.64
LDB3-208ENST00000623007 RMI2Q96E14 147 aa11.03□□□□□ -0.64
LDB3-208ENST00000623007 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
LDB3-208ENST00000623007 PRO0461Q9UI25 63 aa11.02□□□□□ -0.64
LDB3-208ENST00000623007 ZNF561-AS1K7EIQ3 104 aa11.01□□□□□ -0.65
LDB3-208ENST00000623007 C2orf82Q6UX34 121 aa11.01□□□□□ -0.65
LDB3-208ENST00000623007 C2orf48Q96LS8 159 aa11.01□□□□□ -0.65
LDB3-208ENST00000623007 LINC01600Q96MT4 127 aa11.01□□□□□ -0.65
LDB3-208ENST00000623007 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
LDB3-208ENST00000623007 RPL28P46779 137 aaKnown RBP10.99□□□□□ -0.65
LDB3-208ENST00000623007 DNAH3Q8TD57 4116 aa10.98□□□□□ -0.65
LDB3-208ENST00000623007 LST1O00453 97 aa10.98□□□□□ -0.65
LDB3-208ENST00000623007 LINC01620Q4KN68 170 aa10.98□□□□□ -0.65
LDB3-208ENST00000623007 KRTAP26-1Q6PEX3 210 aa10.98□□□□□ -0.65
LDB3-208ENST00000623007 WFDC2Q14508 124 aa10.97□□□□□ -0.65
LDB3-208ENST00000623007 CARD19Q96LW7 228 aa10.97□□□□□ -0.65
LDB3-208ENST00000623007 LINC00588Q9Y4M8 146 aa10.97□□□□□ -0.65
LDB3-208ENST00000623007 H0YGX0 51 aa10.96□□□□□ -0.65
LDB3-208ENST00000623007 SLC25A20O43772 301 aa10.96□□□□□ -0.65
LDB3-208ENST00000623007 IGKV2-28A0A075B6P5 120 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 H3BT86 120 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 IGKV2D-28P01615 120 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 PKD1L1Q8TDX9 2849 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 IGKV2D-24A0A075B6R9 120 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 C9JAW5 83 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 TEN1Q86WV5 123 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 CAMK2N2Q96S95 79 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 TMEM126AQ9H061 195 aa10.95□□□□□ -0.66
LDB3-208ENST00000623007 CMYA5Q8N3K9 4069 aa10.94□□□□□ -0.66
LDB3-208ENST00000623007 TRACP01848 142 aa10.94□□□□□ -0.66
LDB3-208ENST00000623007 UNQ6190/PRO20217Q6UXQ8 127 aa10.94□□□□□ -0.66
LDB3-208ENST00000623007 LINC00337Q8N6G1 96 aa10.94□□□□□ -0.66
LDB3-208ENST00000623007 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
LDB3-208ENST00000623007 ANKRD29Q8N6D5 301 aa10.93□□□□□ -0.66
LDB3-208ENST00000623007 CBY1Q9Y3M2 126 aa10.92□□□□□ -0.66
LDB3-208ENST00000623007 PPDPFLQ8WWR9 84 aa10.92□□□□□ -0.66
LDB3-208ENST00000623007 NUPR2A6NF83 97 aa10.91□□□□□ -0.66
LDB3-208ENST00000623007 OR13C6PQ8NH95 151 aa10.91□□□□□ -0.66
LDB3-208ENST00000623007 SNCGO76070 127 aa10.9□□□□□ -0.66
LDB3-208ENST00000623007 RNF151Q2KHN1 245 aa10.9□□□□□ -0.66
LDB3-208ENST00000623007 C6orf223Q8N319 242 aa10.9□□□□□ -0.66
LDB3-208ENST00000623007 SMCPP49901 116 aaPredicted RBP10.89□□□□□ -0.67
LDB3-208ENST00000623007 C15orf56Q8N910 161 aa10.89□□□□□ -0.67
LDB3-208ENST00000623007 C6orf48Q9UBA6 75 aa10.89□□□□□ -0.67
LDB3-208ENST00000623007 A0A1B0GX51 115 aa10.89□□□□□ -0.67
LDB3-208ENST00000623007 C10orf25Q5T742 122 aa10.89□□□□□ -0.67
LDB3-208ENST00000623007 SMIM11BQ8TCY0 68 aa10.89□□□□□ -0.67
LDB3-208ENST00000623007 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
LDB3-208ENST00000623007 MTURNQ8N3F0 131 aa10.87□□□□□ -0.67
LDB3-208ENST00000623007 CLEC2BQ92478 149 aa10.87□□□□□ -0.67
LDB3-208ENST00000623007 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms