RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 IFI6P09912 130 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 HMGA1P17096 107 aaKnown RBP1.56□□□□□ -2.16
CPNE3-213ENST00000622183 C20orf197Q8N268 126 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 ARL2-SNX15V9GYD0 113 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 HEATR5BQ9P2D3 2071 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 MYO7BQ6PIF6 2116 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 MED12Q93074 2177 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 TRAV23DV6A0A075B6W5 121 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 TRBV6-8A0A0A6YYG3 113 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 TRBV30A0A0K0K1B3 111 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 TEX49A0A1B0GTD5 131 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 ATXN8Q156A1 80 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 CASC2Q6XLA1 102 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 Q86TA4 180 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 FAM103A1Q9BTL3 118 aaKnown RBP1.55□□□□□ -2.16
CPNE3-213ENST00000622183 PROK2Q9HC23 129 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 TMEM14BQ9NUH8 114 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 PLAC8Q9NZF1 115 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 SPTBP11277 2137 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 ZGRF1Q86YA3 2104 aa1.55□□□□□ -2.16
CPNE3-213ENST00000622183 KIAA0100Q14667 2235 aaKnown RBP1.55□□□□□ -2.16
CPNE3-213ENST00000622183 TET1Q8NFU7 2136 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 TRAV10A0A0B4J240 114 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 LOC107984156A0A0G2JMH3 177 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 C10orf142B7Z368 130 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 SAA2P0DJI9 122 aaPredicted RBP1.54□□□□□ -2.16
CPNE3-213ENST00000622183 ELOF1P60002 83 aaKnown RBP1.54□□□□□ -2.16
CPNE3-213ENST00000622183 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 C1orf137Q5JT78 98 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 S100A7L2Q5SY68 101 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 C2orf82Q6UX34 121 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 ZCCHC23Q6ZST2 131 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 ARL17AQ8IVW1 177 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 AMELXQ99217 191 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 HELZ2Q9BYK8 2649 aaKnown RBP1.54□□□□□ -2.16
CPNE3-213ENST00000622183 RP1P56715 2156 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 MED13Q9UHV7 2174 aa1.54□□□□□ -2.16
CPNE3-213ENST00000622183 PRRC2BQ5JSZ5 2229 aaKnown RBP1.54□□□□□ -2.16
CPNE3-213ENST00000622183 LCE6AA0A183 80 aa1.53□□□□□ -2.16
CPNE3-213ENST00000622183 SERF2P84101 59 aa1.53□□□□□ -2.16
CPNE3-213ENST00000622183 PSENENQ9NZ42 101 aa1.53□□□□□ -2.16
CPNE3-213ENST00000622183 KLK9Q9UKQ9 250 aa1.53□□□□□ -2.16
CPNE3-213ENST00000622183 FREM3P0C091 2139 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 PI4KAP42356 2102 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 SMIM27A0A1W2PRY6 76 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 CLPSL1A2RUU4 121 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 LINC01546A6NGU7 62 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 A6NIN4 97 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 IGHV3-33P01772 117 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 PRH1P02810 166 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 EDDM3BP56851 147 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 CNBPP62633 177 aaKnown RBP1.52□□□□□ -2.17
CPNE3-213ENST00000622183 GDF5OSQ5U4N7 250 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 ZNF833PQ6ZTB9 187 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 Q8TAT8 98 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 OBSCN-AS1Q96MR7 158 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 NDUFA4L2Q9NRX3 87 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 LENEPQ9Y5L5 61 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 V9GYV3 84 aa1.52□□□□□ -2.17
CPNE3-213ENST00000622183 DIDO1Q9BTC0 2240 aaKnown RBP1.52□□□□□ -2.17
CPNE3-213ENST00000622183 TNRC6CQ9HCJ0 1690 aaKnown RBP1.51□□□□□ -2.17
CPNE3-213ENST00000622183 ZFHX3Q15911 3703 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 INTS1Q8N201 2190 aaKnown RBP1.51□□□□□ -2.17
CPNE3-213ENST00000622183 KMT2BQ9UMN6 2715 aaPredicted RBP1.51□□□□□ -2.17
CPNE3-213ENST00000622183 LOC110117498A0A087WWA1 95 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 TRBV10-1A0A0K0K1A3 114 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 LINC01549A6NIU2 74 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 ZNF815PA8K554 130 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 HIGD1CA8MV81 97 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 ARMS2P0C7Q2 107 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 MIR22HGQ0VDD5 57 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 GNG13Q9P2W3 67 aa1.51□□□□□ -2.17
CPNE3-213ENST00000622183 TRAV12-3A0A0B4J271 114 aa1.5□□□□□ -2.17
CPNE3-213ENST00000622183 CHKB-CPT1BH3BT56 60 aa1.5□□□□□ -2.17
CPNE3-213ENST00000622183 CAV3P56539 151 aa1.5□□□□□ -2.17
CPNE3-213ENST00000622183 FAM74A4Q5TZK3 123 aa1.5□□□□□ -2.17
CPNE3-213ENST00000622183 C4orf3Q8WVX3 66 aa1.5□□□□□ -2.17
CPNE3-213ENST00000622183 ARFGEF3Q5TH69 2177 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 ALPK2Q86TB3 2170 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 A0A0J9YY99 117 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 H3BVH4 76 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 M0R2N4 97 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 HMGN4O00479 90 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 IGHV3-30P01768 117 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 IGHV3-30-5P0DP03 117 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 LINC01558Q9Y6Z2 57 aa1.49□□□□□ -2.17
CPNE3-213ENST00000622183 CTXND1A0A1B0GTU2 59 aa1.48□□□□□ -2.17
CPNE3-213ENST00000622183 COX6B1P14854 86 aa1.48□□□□□ -2.17
CPNE3-213ENST00000622183 S100A3P33764 101 aa1.48□□□□□ -2.17
CPNE3-213ENST00000622183 KRTAP10-4P60372 401 aaPredicted RBP1.48□□□□□ -2.17
CPNE3-213ENST00000622183 C10orf128Q5T292 105 aa1.48□□□□□ -2.17
CPNE3-213ENST00000622183 TMEM263Q8WUH6 116 aaKnown RBP1.48□□□□□ -2.17
CPNE3-213ENST00000622183 DMAC1Q96GE9 116 aa1.48□□□□□ -2.17
CPNE3-213ENST00000622183 LINC00846Q9NV44 126 aa1.48□□□□□ -2.17
CPNE3-213ENST00000622183 ORMDL1Q9P0S3 153 aa1.48□□□□□ -2.17
CPNE3-213ENST00000622183 A0A087WVE0 104 aa1.47□□□□□ -2.17
CPNE3-213ENST00000622183 NUPR2A6NF83 97 aa1.47□□□□□ -2.17
CPNE3-213ENST00000622183 D6R8Y8 96 aa1.47□□□□□ -2.17
CPNE3-213ENST00000622183 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms