RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 CKS1BP61024 79 aa12.14□□□□□ -0.47
FAM3A-222ENST00000621967 IGHV3OR16-9A0A0B4J2B5 98 aa12.13□□□□□ -0.47
FAM3A-222ENST00000621967 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
FAM3A-222ENST00000621967 NBEAL2Q6ZNJ1 2754 aa12.12□□□□□ -0.47
FAM3A-222ENST00000621967 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
FAM3A-222ENST00000621967 FAM222AQ5U5X8 452 aa12.11□□□□□ -0.47
FAM3A-222ENST00000621967 A0A087WZ39 114 aa12.1□□□□□ -0.47
FAM3A-222ENST00000621967 B9D2Q9BPU9 175 aa12.1□□□□□ -0.47
FAM3A-222ENST00000621967 RETNQ9HD89 108 aa12.09□□□□□ -0.47
FAM3A-222ENST00000621967 FAM240AA0A1B0GVK7 77 aa12.09□□□□□ -0.47
FAM3A-222ENST00000621967 SMIM9A6NGZ8 99 aa12.09□□□□□ -0.47
FAM3A-222ENST00000621967 MIR7-3HGQ8N6C7 128 aa12.09□□□□□ -0.47
FAM3A-222ENST00000621967 IGKV3OR2-268A0A0C4DH90 116 aa12.08□□□□□ -0.48
FAM3A-222ENST00000621967 TRACP01848 142 aa12.08□□□□□ -0.48
FAM3A-222ENST00000621967 DEFB130BP0DP73 79 aa12.08□□□□□ -0.48
FAM3A-222ENST00000621967 DEFB130AP0DP74 79 aa12.08□□□□□ -0.48
FAM3A-222ENST00000621967 X6R8D5 127 aa12.08□□□□□ -0.48
FAM3A-222ENST00000621967 PRKDCP78527 4128 aaKnown RBP12.08□□□□□ -0.48
FAM3A-222ENST00000621967 TRAV13-2A0A0B4J235 113 aa12.07□□□□□ -0.48
FAM3A-222ENST00000621967 TM2D3Q9BRN9 247 aa12.07□□□□□ -0.48
FAM3A-222ENST00000621967 TOMM7Q9P0U1 55 aa12.07□□□□□ -0.48
FAM3A-222ENST00000621967 LINC00959A0A1B0GUT2 108 aa12.07□□□□□ -0.48
FAM3A-222ENST00000621967 IBA57-AS1B1ANH7 110 aa12.06□□□□□ -0.48
FAM3A-222ENST00000621967 SNCGO76070 127 aa12.06□□□□□ -0.48
FAM3A-222ENST00000621967 RPL28P46779 137 aaKnown RBP12.06□□□□□ -0.48
FAM3A-222ENST00000621967 IGKV2-28A0A075B6P5 120 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 IGKV2D-28P01615 120 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 GYPEP15421 78 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 LINC00337Q8N6G1 96 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 DNAH9Q9NYC9 4486 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 A0A1B0GUV1 79 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 CRPP02741 224 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 MRPL23Q16540 153 aaKnown RBP12.05□□□□□ -0.48
FAM3A-222ENST00000621967 SND1-IT1Q9HBX3 110 aa12.05□□□□□ -0.48
FAM3A-222ENST00000621967 MIFP14174 115 aa12.04□□□□□ -0.48
FAM3A-222ENST00000621967 Q6Q795 121 aa12.04□□□□□ -0.48
FAM3A-222ENST00000621967 C5orf38Q86SI9 138 aa12.03□□□□□ -0.48
FAM3A-222ENST00000621967 FAM218AQ96MZ4 157 aa12.03□□□□□ -0.48
FAM3A-222ENST00000621967 LINC00158P58513 81 aa12.03□□□□□ -0.48
FAM3A-222ENST00000621967 C15orf53Q8NAA6 179 aa12.03□□□□□ -0.48
FAM3A-222ENST00000621967 PRO0255Q9UI72 69 aa12.03□□□□□ -0.48
FAM3A-222ENST00000621967 HUWE1Q7Z6Z7 4374 aaKnown RBP12.03□□□□□ -0.48
FAM3A-222ENST00000621967 IGHV4-28A0A0C4DH34 117 aa12.02□□□□□ -0.49
FAM3A-222ENST00000621967 CCL18P55774 89 aa12.02□□□□□ -0.49
FAM3A-222ENST00000621967 FBN3Q75N90 2809 aa12.02□□□□□ -0.49
FAM3A-222ENST00000621967 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
FAM3A-222ENST00000621967 GAGE2EQ4V326 116 aa12.01□□□□□ -0.49
FAM3A-222ENST00000621967 GAGE2DQ9UEU5 116 aa12.01□□□□□ -0.49
FAM3A-222ENST00000621967 LYRM9A8MSI8 78 aa12.01□□□□□ -0.49
FAM3A-222ENST00000621967 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
FAM3A-222ENST00000621967 Q8NAQ8 132 aa12.01□□□□□ -0.49
FAM3A-222ENST00000621967 DEFB4AO15263 64 aa12□□□□□ -0.49
FAM3A-222ENST00000621967 LINC01561Q8N1V8 128 aa12□□□□□ -0.49
FAM3A-222ENST00000621967 C22orf24Q9Y442 160 aa12□□□□□ -0.49
FAM3A-222ENST00000621967 TENM3Q9P273 2699 aa12□□□□□ -0.49
FAM3A-222ENST00000621967 SS18Q15532 418 aa11.99□□□□□ -0.49
FAM3A-222ENST00000621967 BAALC-AS2P0C853 105 aa11.98□□□□□ -0.49
FAM3A-222ENST00000621967 Q8IZM0 81 aa11.98□□□□□ -0.49
FAM3A-222ENST00000621967 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
FAM3A-222ENST00000621967 ACYP1P07311 99 aa11.97□□□□□ -0.49
FAM3A-222ENST00000621967 C11orf68Q9H3H3 251 aaKnown RBP11.97□□□□□ -0.49
FAM3A-222ENST00000621967 PAX4O43316 350 aa11.96□□□□□ -0.49
FAM3A-222ENST00000621967 PFN2P35080 140 aa11.96□□□□□ -0.49
FAM3A-222ENST00000621967 XCL1P47992 114 aa11.96□□□□□ -0.49
FAM3A-222ENST00000621967 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.49
FAM3A-222ENST00000621967 ANAPC13Q9BS18 74 aa11.96□□□□□ -0.49
FAM3A-222ENST00000621967 TRAV26-1A0A087WT03 109 aa11.96□□□□□ -0.5
FAM3A-222ENST00000621967 A0A0J9YWU9 116 aa11.96□□□□□ -0.5
FAM3A-222ENST00000621967 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
FAM3A-222ENST00000621967 TTC32Q5I0X7 151 aa11.95□□□□□ -0.5
FAM3A-222ENST00000621967 H0YGX0 51 aa11.94□□□□□ -0.5
FAM3A-222ENST00000621967 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
FAM3A-222ENST00000621967 A0A096LPF7 62 aa11.93□□□□□ -0.5
FAM3A-222ENST00000621967 SPART-AS1P0CW21 52 aa11.92□□□□□ -0.5
FAM3A-222ENST00000621967 MALP21145 153 aa11.92□□□□□ -0.5
FAM3A-222ENST00000621967 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
FAM3A-222ENST00000621967 A0A087WYN8 130 aa11.92□□□□□ -0.5
FAM3A-222ENST00000621967 TRBV7-7A0A0K0K1E9 115 aa11.92□□□□□ -0.5
FAM3A-222ENST00000621967 Q9HAA7 133 aa11.92□□□□□ -0.5
FAM3A-222ENST00000621967 CELA1Q9UNI1 258 aa11.92□□□□□ -0.5
FAM3A-222ENST00000621967 SDIM1Q6ZPB5 146 aa11.91□□□□□ -0.5
FAM3A-222ENST00000621967 INAFM2P0DMQ5 153 aa11.9□□□□□ -0.5
FAM3A-222ENST00000621967 KIAA0087Q14695 138 aa11.9□□□□□ -0.5
FAM3A-222ENST00000621967 CD164L2Q6UWJ8 174 aa11.9□□□□□ -0.5
FAM3A-222ENST00000621967 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
FAM3A-222ENST00000621967 DAD1P61803 113 aa11.9□□□□□ -0.51
FAM3A-222ENST00000621967 LINC00269Q8N2A0 174 aa11.9□□□□□ -0.51
FAM3A-222ENST00000621967 DNAL4O96015 105 aa11.88□□□□□ -0.51
FAM3A-222ENST00000621967 C11orf45Q8TAV5 145 aa11.88□□□□□ -0.51
FAM3A-222ENST00000621967 CXCL5P42830 114 aa11.88□□□□□ -0.51
FAM3A-222ENST00000621967 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
FAM3A-222ENST00000621967 ATP5G1P05496 136 aa11.87□□□□□ -0.51
FAM3A-222ENST00000621967 COX17Q14061 63 aa11.87□□□□□ -0.51
FAM3A-222ENST00000621967 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
FAM3A-222ENST00000621967 REG3AQ06141 175 aa11.86□□□□□ -0.51
FAM3A-222ENST00000621967 OR13C6PQ8NH95 151 aa11.86□□□□□ -0.51
FAM3A-222ENST00000621967 NDUFC2O95298 119 aa11.85□□□□□ -0.51
FAM3A-222ENST00000621967 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
FAM3A-222ENST00000621967 LINC00643Q86TS7 51 aa11.85□□□□□ -0.51
FAM3A-222ENST00000621967 Q8N3U1 123 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms