RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KIF21BO75037 1637 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 LAMC1P11047 1609 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 IFT172Q9UG01 1749 aa1.69□□□□□ -2.14
BRCA1-229ENST00000621897 M0R135 149 aa1.68□□□□□ -2.14
BRCA1-229ENST00000621897 UQCR11O14957 56 aa1.68□□□□□ -2.14
BRCA1-229ENST00000621897 C5orf56Q8N8D9 126 aa1.68□□□□□ -2.14
BRCA1-229ENST00000621897 TXNDC17Q9BRA2 123 aa1.68□□□□□ -2.14
BRCA1-229ENST00000621897 LINC00846Q9NV44 126 aa1.68□□□□□ -2.14
BRCA1-229ENST00000621897 PLAC8Q9NZF1 115 aa1.68□□□□□ -2.14
BRCA1-229ENST00000621897 C5P01031 1676 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 UBR3Q6ZT12 1888 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 PHRF1Q9P1Y6 1649 aaKnown RBP1.67□□□□□ -2.14
BRCA1-229ENST00000621897 TIAM2Q8IVF5 1701 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 TRBV7-4A0A0J9YYF1 115 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 IGKV2-29A2NJV5 120 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-229ENST00000621897 MGPP08493 103 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 IL9P15248 144 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 SPINT3P49223 89 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 ZNF137PP52743 207 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 COA5Q86WW8 74 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 BAGE3Q86Y29 109 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 ZNF625Q96I27 306 aaPredicted RBP1.67□□□□□ -2.14
BRCA1-229ENST00000621897 SPRR4Q96PI1 79 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 HILPDAQ9Y5L2 63 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 SAMD9Q5K651 1589 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 SDK1Q7Z5N4 2213 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 BCORQ6W2J9 1755 aa1.67□□□□□ -2.14
BRCA1-229ENST00000621897 EIF2AK4Q9P2K8 1649 aaKnown RBP1.66□□□□□ -2.14
BRCA1-229ENST00000621897 BIVM-ERCC5R4GMW8 1640 aa1.66□□□□□ -2.14
BRCA1-229ENST00000621897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-229ENST00000621897 A0A087WVE0 104 aa1.66□□□□□ -2.14
BRCA1-229ENST00000621897 VWDEQ8N2E2 1590 aa1.66□□□□□ -2.14
BRCA1-229ENST00000621897 UGGT1Q9NYU2 1555 aa1.66□□□□□ -2.14
BRCA1-229ENST00000621897 NCOA6Q14686 2063 aaPredicted RBP1.66□□□□□ -2.14
BRCA1-229ENST00000621897 MED13LQ71F56 2210 aa1.66□□□□□ -2.14
BRCA1-229ENST00000621897 FXYD6-FXYD2A0A087WZ82 144 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 CTXND1A0A1B0GTU2 59 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 M0R3E3 92 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 FXYD4P59646 89 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 COX17Q14061 63 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 ZNF236Q9UL36 1845 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 NHSL1Q5SYE7 1610 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 ICE1Q9Y2F5 2266 aa1.65□□□□□ -2.15
BRCA1-229ENST00000621897 CROCC2H7BZ55 1655 aa1.64□□□□□ -2.15
BRCA1-229ENST00000621897 KMT2BQ9UMN6 2715 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-229ENST00000621897 RICTORQ6R327 1708 aa1.64□□□□□ -2.15
BRCA1-229ENST00000621897 Q6ZRN7 208 aaPredicted RBP1.64□□□□□ -2.15
BRCA1-229ENST00000621897 LINC00208Q96KT6 92 aa1.64□□□□□ -2.15
BRCA1-229ENST00000621897 Q96NJ1 140 aa1.64□□□□□ -2.15
BRCA1-229ENST00000621897 LRP6O75581 1613 aa1.64□□□□□ -2.15
BRCA1-229ENST00000621897 CLTCL1P53675 1640 aa1.64□□□□□ -2.15
BRCA1-229ENST00000621897 E9PCH4 1651 aa1.64□□□□□ -2.15
BRCA1-229ENST00000621897 INTS1Q8N201 2190 aaKnown RBP1.64□□□□□ -2.15
BRCA1-229ENST00000621897 LRRC7Q96NW7 1537 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 A0A0D9SFI3 127 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 A0A1B0GUT8 65 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 H3BVH4 76 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 ATXN8Q156A1 80 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 FDCSPQ8NFU4 85 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 SMIM4Q8WVI0 70 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 GNG13Q9P2W3 67 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 ZNF831Q5JPB2 1677 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 IQGAP2Q13576 1575 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 DIP2AQ14689 1571 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 CDC42BPAQ5VT25 1732 aa1.63□□□□□ -2.15
BRCA1-229ENST00000621897 NESP48681 1621 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 SORL1Q92673 2214 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 H0Y9P7 68 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 HCRTO43612 131 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 GDF5OSQ5U4N7 250 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 LRRC37A2A6NM11 1700 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 PAPPA2Q9BXP8 1791 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 CACNA1CQ13936 2221 aa1.62□□□□□ -2.15
BRCA1-229ENST00000621897 ABCC6O95255 1503 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 CACNA1GO43497 2377 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 TRGV1A0A0A0MS02 117 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 TRAV1-2A0A0B4J238 106 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 SNRPGP15A8MWD9 76 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 NDUFB1O75438 58 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 HMGA1P17096 107 aaKnown RBP1.61□□□□□ -2.15
BRCA1-229ENST00000621897 CAV3P56539 151 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 SPATA8Q6RVD6 105 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 LINC00472Q9H8W2 130 aa1.61□□□□□ -2.15
BRCA1-229ENST00000621897 KIAA0556O60303 1618 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 TRGV2A0A075B6R0 118 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 S100A3P33764 101 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 Q6ZQY7 126 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 DEFB107AQ8IZN7 70 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 TMEM263Q8WUH6 116 aaKnown RBP1.6□□□□□ -2.15
BRCA1-229ENST00000621897 EFCAB6Q5THR3 1501 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 FMN2Q9NZ56 1722 aa1.6□□□□□ -2.15
BRCA1-229ENST00000621897 C3P01024 1663 aa1.59□□□□□ -2.15
BRCA1-229ENST00000621897 GCC2Q8IWJ2 1684 aa1.59□□□□□ -2.15
BRCA1-229ENST00000621897 SPINK7P58062 85 aa1.59□□□□□ -2.15
BRCA1-229ENST00000621897 C10orf99Q6UWK7 81 aa1.59□□□□□ -2.15
BRCA1-229ENST00000621897 AGLP35573 1532 aa1.59□□□□□ -2.16
BRCA1-229ENST00000621897 ERCC6L2Q5T890 1561 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms