RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SONP18583 2426 aaKnown RBP8.03□□□□□ -1.12
CLIP1-219ENST00000620786 Q6ZRU5 148 aa8.03□□□□□ -1.12
CLIP1-219ENST00000620786 PRR4Q16378 134 aa8.02□□□□□ -1.12
CLIP1-219ENST00000620786 ATRXP46100 2492 aa8.02□□□□□ -1.12
CLIP1-219ENST00000620786 NAV3Q8IVL0 2385 aa8.02□□□□□ -1.13
CLIP1-219ENST00000620786 AMELXQ99217 191 aa8.02□□□□□ -1.13
CLIP1-219ENST00000620786 COL4A2P08572 1712 aa8.01□□□□□ -1.13
CLIP1-219ENST00000620786 A0A087WYN8 130 aa8.01□□□□□ -1.13
CLIP1-219ENST00000620786 NCOR2Q9Y618 2525 aa8.01□□□□□ -1.13
CLIP1-219ENST00000620786 LIMD2Q9BT23 127 aa8.01□□□□□ -1.13
CLIP1-219ENST00000620786 SBSPONQ8IVN8 264 aa8□□□□□ -1.13
CLIP1-219ENST00000620786 SORL1Q92673 2214 aa8□□□□□ -1.13
CLIP1-219ENST00000620786 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
CLIP1-219ENST00000620786 PRLHP81277 87 aa8□□□□□ -1.13
CLIP1-219ENST00000620786 X6R8D5 127 aa7.99□□□□□ -1.13
CLIP1-219ENST00000620786 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
CLIP1-219ENST00000620786 COX8CQ7Z4L0 72 aa7.99□□□□□ -1.13
CLIP1-219ENST00000620786 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
CLIP1-219ENST00000620786 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
CLIP1-219ENST00000620786 IGF2RP11717 2491 aa7.98□□□□□ -1.13
CLIP1-219ENST00000620786 C22orf24Q9Y442 160 aa7.98□□□□□ -1.13
CLIP1-219ENST00000620786 CACNA1AO00555 2505 aa7.98□□□□□ -1.13
CLIP1-219ENST00000620786 NDUFC1O43677 76 aa7.97□□□□□ -1.13
CLIP1-219ENST00000620786 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
CLIP1-219ENST00000620786 XGP55808 180 aa7.97□□□□□ -1.13
CLIP1-219ENST00000620786 ATP5EP56381 51 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-219ENST00000620786 V9GYY9 64 aa7.97□□□□□ -1.13
CLIP1-219ENST00000620786 SERP2Q8N6R1 65 aa7.96□□□□□ -1.13
CLIP1-219ENST00000620786 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.13
CLIP1-219ENST00000620786 C11orf72Q8NBR9 251 aa7.96□□□□□ -1.13
CLIP1-219ENST00000620786 A0A087WSZ3 146 aa7.96□□□□□ -1.14
CLIP1-219ENST00000620786 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
CLIP1-219ENST00000620786 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
CLIP1-219ENST00000620786 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
CLIP1-219ENST00000620786 TET2Q6N021 2002 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-219ENST00000620786 CCDC168Q8NDH2 2452 aa7.94□□□□□ -1.14
CLIP1-219ENST00000620786 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-219ENST00000620786 IMUPQ9GZP8 106 aa7.93□□□□□ -1.14
CLIP1-219ENST00000620786 FAM240AA0A1B0GVK7 77 aa7.93□□□□□ -1.14
CLIP1-219ENST00000620786 LINC00208Q96KT6 92 aa7.93□□□□□ -1.14
CLIP1-219ENST00000620786 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
CLIP1-219ENST00000620786 A8MTW9 85 aa7.93□□□□□ -1.14
CLIP1-219ENST00000620786 EML5Q05BV3 1969 aa7.92□□□□□ -1.14
CLIP1-219ENST00000620786 A6NED7 52 aa7.92□□□□□ -1.14
CLIP1-219ENST00000620786 C16orf90A8MZG2 172 aa7.91□□□□□ -1.14
CLIP1-219ENST00000620786 RTL8CO15255 209 aa7.91□□□□□ -1.14
CLIP1-219ENST00000620786 LINC00315P59091 139 aa7.91□□□□□ -1.14
CLIP1-219ENST00000620786 SPINK1P00995 79 aa7.91□□□□□ -1.14
CLIP1-219ENST00000620786 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
CLIP1-219ENST00000620786 PCOTHQ58A44 107 aa7.9□□□□□ -1.15
CLIP1-219ENST00000620786 SPACA4Q8TDM5 124 aa7.9□□□□□ -1.15
CLIP1-219ENST00000620786 PIEZO2Q9H5I5 2752 aa7.89□□□□□ -1.15
CLIP1-219ENST00000620786 TRBV7-6A0A0J9YX20 115 aa7.89□□□□□ -1.15
CLIP1-219ENST00000620786 NBDYA0A0U1RRE5 68 aa7.89□□□□□ -1.15
CLIP1-219ENST00000620786 H3BNG1 76 aa7.89□□□□□ -1.15
CLIP1-219ENST00000620786 LINC00310P59036 64 aa7.89□□□□□ -1.15
CLIP1-219ENST00000620786 PIEZO1Q92508 2521 aa7.88□□□□□ -1.15
CLIP1-219ENST00000620786 ABCA2Q9BZC7 2435 aa7.87□□□□□ -1.15
CLIP1-219ENST00000620786 KIF25-AS1Q9Y6Z4 181 aa7.87□□□□□ -1.15
CLIP1-219ENST00000620786 MOBPQ13875 183 aa7.87□□□□□ -1.15
CLIP1-219ENST00000620786 COX7CP15954 63 aa7.87□□□□□ -1.15
CLIP1-219ENST00000620786 HCG22E2RYF7 251 aa7.87□□□□□ -1.15
CLIP1-219ENST00000620786 LINC00167Q96N53 147 aa7.87□□□□□ -1.15
CLIP1-219ENST00000620786 FAM19A4Q96LR4 140 aa7.86□□□□□ -1.15
CLIP1-219ENST00000620786 H0Y9P7 68 aa7.86□□□□□ -1.15
CLIP1-219ENST00000620786 A0A096LNJ9 63 aa7.86□□□□□ -1.15
CLIP1-219ENST00000620786 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
CLIP1-219ENST00000620786 PHF5AQ7RTV0 110 aaKnown RBP7.85□□□□□ -1.15
CLIP1-219ENST00000620786 C6orf48Q9UBA6 75 aa7.85□□□□□ -1.15
CLIP1-219ENST00000620786 AGRNO00468 2067 aa7.85□□□□□ -1.15
CLIP1-219ENST00000620786 A0A087WVE0 104 aa7.85□□□□□ -1.15
CLIP1-219ENST00000620786 Q6Q795 121 aa7.85□□□□□ -1.15
CLIP1-219ENST00000620786 LINC00588Q9Y4M8 146 aa7.85□□□□□ -1.15
CLIP1-219ENST00000620786 KIAA0087Q14695 138 aa7.84□□□□□ -1.15
CLIP1-219ENST00000620786 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
CLIP1-219ENST00000620786 EP400Q96L91 3159 aa7.84□□□□□ -1.16
CLIP1-219ENST00000620786 A0A0U1RQV1 116 aa7.84□□□□□ -1.16
CLIP1-219ENST00000620786 COL27A1Q8IZC6 1860 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-219ENST00000620786 Q8NAQ8 132 aa7.83□□□□□ -1.16
CLIP1-219ENST00000620786 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
CLIP1-219ENST00000620786 IGKV2-30P06310 120 aa7.83□□□□□ -1.16
CLIP1-219ENST00000620786 J3QL48 77 aa7.82□□□□□ -1.16
CLIP1-219ENST00000620786 Q6ZRP5 223 aa7.82□□□□□ -1.16
CLIP1-219ENST00000620786 Q8N3U1 123 aa7.82□□□□□ -1.16
CLIP1-219ENST00000620786 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
CLIP1-219ENST00000620786 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
CLIP1-219ENST00000620786 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
CLIP1-219ENST00000620786 PTPRBP23467 1997 aa7.81□□□□□ -1.16
CLIP1-219ENST00000620786 IGLV5-39A0A0G2JS06 123 aa7.81□□□□□ -1.16
CLIP1-219ENST00000620786 TYMSOSQ8TAI1 123 aa7.81□□□□□ -1.16
CLIP1-219ENST00000620786 CRYGAP11844 174 aa7.8□□□□□ -1.16
CLIP1-219ENST00000620786 C7orf65Q6ZTY9 151 aa7.79□□□□□ -1.16
CLIP1-219ENST00000620786 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
CLIP1-219ENST00000620786 RPL37AP61513 92 aaKnown RBP7.77□□□□□ -1.16
CLIP1-219ENST00000620786 EPM2AB3EWF7 344 aa7.77□□□□□ -1.17
CLIP1-219ENST00000620786 LINC01546A6NGU7 62 aa7.76□□□□□ -1.17
CLIP1-219ENST00000620786 Q8NBF4 154 aa7.76□□□□□ -1.17
CLIP1-219ENST00000620786 KRTAP10-11P60412 298 aa7.76□□□□□ -1.17
CLIP1-219ENST00000620786 hDV103S1A0JD37 113 aa7.74□□□□□ -1.17
CLIP1-219ENST00000620786 K7EIL1 84 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms