RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PAPPA-AS1Q5QFB9 102 aa10.48□□□□□ -0.73
HMGN3-203ENST00000620514 SCGB3A1Q96QR1 104 aa10.48□□□□□ -0.73
HMGN3-203ENST00000620514 M0QXV9 152 aa10.47□□□□□ -0.73
HMGN3-203ENST00000620514 IGLV7-43P04211 117 aa10.47□□□□□ -0.73
HMGN3-203ENST00000620514 CKS1BP61024 79 aa10.47□□□□□ -0.73
HMGN3-203ENST00000620514 C6orf226Q5I0X4 101 aa10.47□□□□□ -0.73
HMGN3-203ENST00000620514 ERASQ7Z444 233 aa10.47□□□□□ -0.73
HMGN3-203ENST00000620514 Q8IZM0 81 aa10.47□□□□□ -0.73
HMGN3-203ENST00000620514 GEMIN7Q9H840 131 aaKnown RBP10.47□□□□□ -0.73
HMGN3-203ENST00000620514 SEC11AP67812 179 aa10.46□□□□□ -0.73
HMGN3-203ENST00000620514 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.73
HMGN3-203ENST00000620514 LINC00469Q8N7U9 141 aa10.46□□□□□ -0.73
HMGN3-203ENST00000620514 LINC01546A6NGU7 62 aa10.45□□□□□ -0.74
HMGN3-203ENST00000620514 C10orf91Q5T1B1 145 aa10.45□□□□□ -0.74
HMGN3-203ENST00000620514 MRPL18Q9H0U6 180 aaKnown RBP10.45□□□□□ -0.74
HMGN3-203ENST00000620514 UBE2BP63146 152 aa10.44□□□□□ -0.74
HMGN3-203ENST00000620514 FABP9Q0Z7S8 132 aa10.44□□□□□ -0.74
HMGN3-203ENST00000620514 RPS10P5Q9NQ39 176 aa10.44□□□□□ -0.74
HMGN3-203ENST00000620514 COX19Q49B96 90 aa10.43□□□□□ -0.74
HMGN3-203ENST00000620514 CARHSP1Q9Y2V2 147 aaKnown RBP10.43□□□□□ -0.74
HMGN3-203ENST00000620514 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
HMGN3-203ENST00000620514 LCE2BO14633 110 aa10.42□□□□□ -0.74
HMGN3-203ENST00000620514 RHEBQ15382 184 aa10.42□□□□□ -0.74
HMGN3-203ENST00000620514 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
HMGN3-203ENST00000620514 XAGE1AQ9HD64 81 aa10.42□□□□□ -0.74
HMGN3-203ENST00000620514 TINCRA0A1B0GVN0 87 aa10.41□□□□□ -0.74
HMGN3-203ENST00000620514 F8VRH5 84 aa10.41□□□□□ -0.74
HMGN3-203ENST00000620514 DIRC1Q969H9 104 aa10.41□□□□□ -0.74
HMGN3-203ENST00000620514 CST9LQ9H4G1 147 aa10.41□□□□□ -0.74
HMGN3-203ENST00000620514 LRP2P98164 4655 aa10.4□□□□□ -0.74
HMGN3-203ENST00000620514 IGLV5-45A0A087WSX0 123 aa10.4□□□□□ -0.74
HMGN3-203ENST00000620514 SMCO4Q9NRQ5 59 aa10.4□□□□□ -0.74
HMGN3-203ENST00000620514 H0Y9J4 135 aa10.39□□□□□ -0.75
HMGN3-203ENST00000620514 COX7B2Q8TF08 81 aa10.39□□□□□ -0.75
HMGN3-203ENST00000620514 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
HMGN3-203ENST00000620514 SPINK8P0C7L1 97 aa10.38□□□□□ -0.75
HMGN3-203ENST00000620514 CXCL5P42830 114 aa10.38□□□□□ -0.75
HMGN3-203ENST00000620514 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-203ENST00000620514 PMVKQ15126 192 aa10.38□□□□□ -0.75
HMGN3-203ENST00000620514 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
HMGN3-203ENST00000620514 PRR26Q8N8Z3 221 aa10.38□□□□□ -0.75
HMGN3-203ENST00000620514 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
HMGN3-203ENST00000620514 URB1-AS1Q96HZ7 61 aa10.37□□□□□ -0.75
HMGN3-203ENST00000620514 A0A096LNJ9 63 aa10.36□□□□□ -0.75
HMGN3-203ENST00000620514 TRAPPC1Q9Y5R8 145 aa10.35□□□□□ -0.75
HMGN3-203ENST00000620514 KRTAP1-4P0C5Y4 121 aa10.34□□□□□ -0.75
HMGN3-203ENST00000620514 C18orf32Q8TCD1 76 aa10.34□□□□□ -0.75
HMGN3-203ENST00000620514 APOC3P02656 99 aa10.33□□□□□ -0.76
HMGN3-203ENST00000620514 LINC00614P0C842 121 aa10.32□□□□□ -0.76
HMGN3-203ENST00000620514 IGLC3P0DOY3 106 aa10.32□□□□□ -0.76
HMGN3-203ENST00000620514 NDUFA6P56556 154 aa10.32□□□□□ -0.76
HMGN3-203ENST00000620514 RAB5BP61020 215 aa10.32□□□□□ -0.76
HMGN3-203ENST00000620514 PMCHL1Q16048 86 aa10.32□□□□□ -0.76
HMGN3-203ENST00000620514 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
HMGN3-203ENST00000620514 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
HMGN3-203ENST00000620514 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
HMGN3-203ENST00000620514 H3BRM9 83 aa10.3□□□□□ -0.76
HMGN3-203ENST00000620514 ZNF861PO60384 105 aa10.3□□□□□ -0.76
HMGN3-203ENST00000620514 HBDP02042 147 aa10.3□□□□□ -0.76
HMGN3-203ENST00000620514 NUPR1O60356 82 aa10.29□□□□□ -0.76
HMGN3-203ENST00000620514 ZNF22P17026 224 aaPredicted RBP10.29□□□□□ -0.76
HMGN3-203ENST00000620514 LINC00167Q96N53 147 aa10.29□□□□□ -0.76
HMGN3-203ENST00000620514 IGLV1-50A0A075B6I6 118 aa10.28□□□□□ -0.76
HMGN3-203ENST00000620514 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
HMGN3-203ENST00000620514 GAGE10A6NGK3 116 aa10.27□□□□□ -0.77
HMGN3-203ENST00000620514 RPL37AP8A6NKH3 93 aa10.27□□□□□ -0.77
HMGN3-203ENST00000620514 SNAPINO95295 136 aa10.27□□□□□ -0.77
HMGN3-203ENST00000620514 SVBPQ8N300 66 aa10.27□□□□□ -0.77
HMGN3-203ENST00000620514 RNF213Q63HN8 5207 aa10.26□□□□□ -0.77
HMGN3-203ENST00000620514 ATP5LO75964 103 aa10.26□□□□□ -0.77
HMGN3-203ENST00000620514 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
HMGN3-203ENST00000620514 PFN2P35080 140 aa10.25□□□□□ -0.77
HMGN3-203ENST00000620514 NDUFA5Q16718 116 aa10.25□□□□□ -0.77
HMGN3-203ENST00000620514 BAGE3Q86Y29 109 aa10.25□□□□□ -0.77
HMGN3-203ENST00000620514 YPEL4Q96NS1 127 aa10.25□□□□□ -0.77
HMGN3-203ENST00000620514 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
HMGN3-203ENST00000620514 BCE1O60756 84 aa10.24□□□□□ -0.77
HMGN3-203ENST00000620514 SCO1O75880 301 aa10.24□□□□□ -0.77
HMGN3-203ENST00000620514 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
HMGN3-203ENST00000620514 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
HMGN3-203ENST00000620514 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
HMGN3-203ENST00000620514 ERG28Q9UKR5 140 aa10.22□□□□□ -0.77
HMGN3-203ENST00000620514 RPL28P46779 137 aaKnown RBP10.21□□□□□ -0.77
HMGN3-203ENST00000620514 LPAP08519 4548 aa10.21□□□□□ -0.78
HMGN3-203ENST00000620514 RPL13AP40429 203 aaKnown RBP10.2□□□□□ -0.78
HMGN3-203ENST00000620514 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
HMGN3-203ENST00000620514 CHTOPQ9Y3Y2 248 aaKnown RBP10.19□□□□□ -0.78
HMGN3-203ENST00000620514 IGKV2-28A0A075B6P5 120 aa10.18□□□□□ -0.78
HMGN3-203ENST00000620514 IGKV2D-28P01615 120 aa10.18□□□□□ -0.78
HMGN3-203ENST00000620514 VPREB1P12018 145 aa10.18□□□□□ -0.78
HMGN3-203ENST00000620514 Q8NDZ9 215 aa10.18□□□□□ -0.78
HMGN3-203ENST00000620514 A0A087X002 238 aa10.17□□□□□ -0.78
HMGN3-203ENST00000620514 KRTAP13-1Q8IUC0 172 aa10.17□□□□□ -0.78
HMGN3-203ENST00000620514 CBLN2Q8IUK8 224 aa10.17□□□□□ -0.78
HMGN3-203ENST00000620514 CHCHD1Q96BP2 118 aaKnown RBP10.17□□□□□ -0.78
HMGN3-203ENST00000620514 COX17Q14061 63 aa10.16□□□□□ -0.78
HMGN3-203ENST00000620514 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
HMGN3-203ENST00000620514 TRAV12-1A0A0B4J245 112 aa10.15□□□□□ -0.78
HMGN3-203ENST00000620514 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
HMGN3-203ENST00000620514 UBE2AP49459 152 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms