RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 CXCL5P42830 114 aa13.66□□□□□ -0.22
LAPTM4B-204ENST00000619747 COX6A2Q02221 97 aa13.66□□□□□ -0.22
LAPTM4B-204ENST00000619747 DEFB135Q30KP9 77 aa13.66□□□□□ -0.22
LAPTM4B-204ENST00000619747 C9orf66Q5T8R8 295 aa13.65□□□□□ -0.22
LAPTM4B-204ENST00000619747 SDIM1Q6ZPB5 146 aa13.65□□□□□ -0.22
LAPTM4B-204ENST00000619747 DAZ4Q86SG3 579 aaKnown RBP13.65□□□□□ -0.22
LAPTM4B-204ENST00000619747 OVOL2Q9BRP0 275 aa13.65□□□□□ -0.22
LAPTM4B-204ENST00000619747 DAZ3Q9NR90 486 aaKnown RBP13.65□□□□□ -0.22
LAPTM4B-204ENST00000619747 IGKV3OR2-268A0A0C4DH90 116 aa13.64□□□□□ -0.23
LAPTM4B-204ENST00000619747 HIST1H4AP62805 103 aaKnown RBP13.64□□□□□ -0.23
LAPTM4B-204ENST00000619747 MRAPQ8TCY5 172 aa13.64□□□□□ -0.23
LAPTM4B-204ENST00000619747 FBN1P35555 2871 aaKnown RBP13.63□□□□□ -0.23
LAPTM4B-204ENST00000619747 FHL2Q14192 279 aa13.63□□□□□ -0.23
LAPTM4B-204ENST00000619747 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
LAPTM4B-204ENST00000619747 DAND5Q8N907 189 aa13.62□□□□□ -0.23
LAPTM4B-204ENST00000619747 A0A096LPF7 62 aa13.62□□□□□ -0.23
LAPTM4B-204ENST00000619747 UBE2L6O14933 153 aa13.61□□□□□ -0.23
LAPTM4B-204ENST00000619747 TIRAPP58753 221 aa13.61□□□□□ -0.23
LAPTM4B-204ENST00000619747 X6R8D5 127 aa13.61□□□□□ -0.23
LAPTM4B-204ENST00000619747 IGHV1-58A0A0C4DH39 117 aa13.6□□□□□ -0.23
LAPTM4B-204ENST00000619747 TRBV6-4A0A1B0GX49 114 aa13.6□□□□□ -0.23
LAPTM4B-204ENST00000619747 RPL18AQ02543 176 aaKnown RBP13.6□□□□□ -0.23
LAPTM4B-204ENST00000619747 NDUFA12Q9UI09 145 aa13.6□□□□□ -0.23
LAPTM4B-204ENST00000619747 VSIG2Q96IQ7 327 aa13.6□□□□□ -0.23
LAPTM4B-204ENST00000619747 UPK3BQ9BT76 320 aa13.6□□□□□ -0.23
LAPTM4B-204ENST00000619747 LINC00242Q5T6M2 205 aa13.59□□□□□ -0.23
LAPTM4B-204ENST00000619747 MIAQ16674 131 aa13.59□□□□□ -0.23
LAPTM4B-204ENST00000619747 ZNF625Q96I27 306 aaPredicted RBP13.59□□□□□ -0.23
LAPTM4B-204ENST00000619747 TMEM243Q9BU79 118 aa13.59□□□□□ -0.23
LAPTM4B-204ENST00000619747 A0A087WVE0 104 aa13.58□□□□□ -0.24
LAPTM4B-204ENST00000619747 IGKV3D-7A0A0C4DH55 119 aa13.58□□□□□ -0.24
LAPTM4B-204ENST00000619747 A0A0U1RRA0 63 aa13.57□□□□□ -0.24
LAPTM4B-204ENST00000619747 FAM222AQ5U5X8 452 aa13.57□□□□□ -0.24
LAPTM4B-204ENST00000619747 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
LAPTM4B-204ENST00000619747 NOTCH1P46531 2555 aa13.57□□□□□ -0.24
LAPTM4B-204ENST00000619747 SERP2Q8N6R1 65 aa13.57□□□□□ -0.24
LAPTM4B-204ENST00000619747 COL6A5A8TX70 2615 aa13.56□□□□□ -0.24
LAPTM4B-204ENST00000619747 BAALC-AS2P0C853 105 aa13.56□□□□□ -0.24
LAPTM4B-204ENST00000619747 GYPEP15421 78 aa13.55□□□□□ -0.24
LAPTM4B-204ENST00000619747 C1orf43Q9BWL3 253 aa13.54□□□□□ -0.24
LAPTM4B-204ENST00000619747 IGLV4-60A0A075B6I1 120 aa13.54□□□□□ -0.24
LAPTM4B-204ENST00000619747 LINC00336Q6ZUF6 198 aa13.54□□□□□ -0.24
LAPTM4B-204ENST00000619747 C22orf24Q9Y442 160 aa13.54□□□□□ -0.24
LAPTM4B-204ENST00000619747 OXLD1Q5BKU9 147 aa13.53□□□□□ -0.24
LAPTM4B-204ENST00000619747 TRBV6-8A0A0A6YYG3 113 aa13.52□□□□□ -0.24
LAPTM4B-204ENST00000619747 COX7A2LO14548 114 aa13.52□□□□□ -0.25
LAPTM4B-204ENST00000619747 PFN2P35080 140 aa13.51□□□□□ -0.25
LAPTM4B-204ENST00000619747 PKIGQ9Y2B9 76 aa13.51□□□□□ -0.25
LAPTM4B-204ENST00000619747 MALP21145 153 aa13.5□□□□□ -0.25
LAPTM4B-204ENST00000619747 BAHCC1Q9P281 2608 aa13.5□□□□□ -0.25
LAPTM4B-204ENST00000619747 IGHV4-28A0A0C4DH34 117 aa13.5□□□□□ -0.25
LAPTM4B-204ENST00000619747 Q9H8V8 135 aa13.49□□□□□ -0.25
LAPTM4B-204ENST00000619747 PRO0628Q9UI54 55 aa13.49□□□□□ -0.25
LAPTM4B-204ENST00000619747 HTN3P15516 51 aa13.49□□□□□ -0.25
LAPTM4B-204ENST00000619747 IGLV5-45A0A087WSX0 123 aa13.49□□□□□ -0.25
LAPTM4B-204ENST00000619747 USP17L23D6RBM5 183 aa13.49□□□□□ -0.25
LAPTM4B-204ENST00000619747 IGHV4-30-4P0DP06 118 aa13.49□□□□□ -0.25
LAPTM4B-204ENST00000619747 CELA1Q9UNI1 258 aa13.49□□□□□ -0.25
LAPTM4B-204ENST00000619747 SMIM1B2RUZ4 78 aa13.48□□□□□ -0.25
LAPTM4B-204ENST00000619747 LINC01561Q8N1V8 128 aa13.48□□□□□ -0.25
LAPTM4B-204ENST00000619747 Q9HAA7 133 aa13.48□□□□□ -0.25
LAPTM4B-204ENST00000619747 ANK2Q01484 3957 aa13.48□□□□□ -0.25
LAPTM4B-204ENST00000619747 APOC4P55056 127 aa13.48□□□□□ -0.25
LAPTM4B-204ENST00000619747 CLPSL2Q6UWE3 100 aa13.48□□□□□ -0.25
LAPTM4B-204ENST00000619747 FAM218AQ96MZ4 157 aa13.47□□□□□ -0.25
LAPTM4B-204ENST00000619747 F8WDY8 70 aa13.46□□□□□ -0.26
LAPTM4B-204ENST00000619747 PAX4O43316 350 aa13.46□□□□□ -0.26
LAPTM4B-204ENST00000619747 INAFM2P0DMQ5 153 aa13.46□□□□□ -0.26
LAPTM4B-204ENST00000619747 LINC00612Q8N6U2 182 aa13.46□□□□□ -0.26
LAPTM4B-204ENST00000619747 WFDC9Q8NEX5 89 aa13.46□□□□□ -0.26
LAPTM4B-204ENST00000619747 TOMM7Q9P0U1 55 aa13.46□□□□□ -0.26
LAPTM4B-204ENST00000619747 PRO0255Q9UI72 69 aa13.46□□□□□ -0.26
LAPTM4B-204ENST00000619747 KRTAP24-1Q3LI83 254 aa13.45□□□□□ -0.26
LAPTM4B-204ENST00000619747 DAD1P61803 113 aa13.44□□□□□ -0.26
LAPTM4B-204ENST00000619747 DNAL4O96015 105 aa13.43□□□□□ -0.26
LAPTM4B-204ENST00000619747 C9orf129Q5T035 196 aaKnown RBP13.43□□□□□ -0.26
LAPTM4B-204ENST00000619747 PRIMA1Q86XR5 153 aa13.43□□□□□ -0.26
LAPTM4B-204ENST00000619747 TENM3Q9P273 2699 aa13.43□□□□□ -0.26
LAPTM4B-204ENST00000619747 IGLV5-39A0A0G2JS06 123 aa13.43□□□□□ -0.26
LAPTM4B-204ENST00000619747 Q8N3U1 123 aa13.43□□□□□ -0.26
LAPTM4B-204ENST00000619747 LINC00846Q9NV44 126 aa13.43□□□□□ -0.26
LAPTM4B-204ENST00000619747 C14orf132Q9NPU4 83 aa13.42□□□□□ -0.26
LAPTM4B-204ENST00000619747 NDUFA1O15239 70 aa13.42□□□□□ -0.26
LAPTM4B-204ENST00000619747 LYRM9A8MSI8 78 aa13.41□□□□□ -0.26
LAPTM4B-204ENST00000619747 Q8NAQ8 132 aa13.41□□□□□ -0.26
LAPTM4B-204ENST00000619747 LINC00308Q8TCZ7 52 aa13.4□□□□□ -0.26
LAPTM4B-204ENST00000619747 RETNQ9HD89 108 aa13.4□□□□□ -0.26
LAPTM4B-204ENST00000619747 Q6JHZ5 121 aa13.39□□□□□ -0.27
LAPTM4B-204ENST00000619747 XCL1P47992 114 aa13.38□□□□□ -0.27
LAPTM4B-204ENST00000619747 KRTAP10-11P60412 298 aa13.38□□□□□ -0.27
LAPTM4B-204ENST00000619747 CIRBPQ14011 172 aaKnown RBP13.38□□□□□ -0.27
LAPTM4B-204ENST00000619747 C11orf68Q9H3H3 251 aaKnown RBP13.38□□□□□ -0.27
LAPTM4B-204ENST00000619747 FAM19A3Q7Z5A8 133 aa13.38□□□□□ -0.27
LAPTM4B-204ENST00000619747 NBEAL1Q6ZS30 2694 aa13.38□□□□□ -0.27
LAPTM4B-204ENST00000619747 CYSRT1A8MQ03 144 aa13.37□□□□□ -0.27
LAPTM4B-204ENST00000619747 SOSTDC1Q6X4U4 206 aa13.36□□□□□ -0.27
LAPTM4B-204ENST00000619747 C20orf197Q8N268 126 aa13.36□□□□□ -0.27
LAPTM4B-204ENST00000619747 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
LAPTM4B-204ENST00000619747 IGLV10-54A0A075B6I4 117 aa13.35□□□□□ -0.27
LAPTM4B-204ENST00000619747 IGHV3OR16-9A0A0B4J2B5 98 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms