RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 F8W1H4 67 aa12.98□□□□□ -0.33
PSPC1-206ENST00000619300 H3BMG7 143 aa12.98□□□□□ -0.33
PSPC1-206ENST00000619300 COX7A2LO14548 114 aa12.98□□□□□ -0.33
PSPC1-206ENST00000619300 LYRM7Q5U5X0 104 aa12.98□□□□□ -0.33
PSPC1-206ENST00000619300 H7C2G1 150 aa12.97□□□□□ -0.33
PSPC1-206ENST00000619300 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
PSPC1-206ENST00000619300 PRR34Q9NV39 138 aa12.97□□□□□ -0.33
PSPC1-206ENST00000619300 KLK12Q9UKR0 248 aa12.97□□□□□ -0.33
PSPC1-206ENST00000619300 SOSTDC1Q6X4U4 206 aa12.96□□□□□ -0.33
PSPC1-206ENST00000619300 Q8IZM0 81 aa12.96□□□□□ -0.33
PSPC1-206ENST00000619300 PPDPFQ9H3Y8 114 aa12.95□□□□□ -0.34
PSPC1-206ENST00000619300 IBA57-AS1B1ANH7 110 aa12.95□□□□□ -0.34
PSPC1-206ENST00000619300 SCGB1C2P0DMR2 95 aa12.95□□□□□ -0.34
PSPC1-206ENST00000619300 PSMB2P49721 201 aa12.94□□□□□ -0.34
PSPC1-206ENST00000619300 FOXI1Q12951 378 aa12.94□□□□□ -0.34
PSPC1-206ENST00000619300 Q1RN00 199 aa12.94□□□□□ -0.34
PSPC1-206ENST00000619300 ESRGQ1W209 222 aa12.94□□□□□ -0.34
PSPC1-206ENST00000619300 SCGB1A1P11684 91 aa12.93□□□□□ -0.34
PSPC1-206ENST00000619300 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
PSPC1-206ENST00000619300 J3QR89 54 aa12.93□□□□□ -0.34
PSPC1-206ENST00000619300 MALP21145 153 aa12.93□□□□□ -0.34
PSPC1-206ENST00000619300 LINC00158P58513 81 aa12.93□□□□□ -0.34
PSPC1-206ENST00000619300 WFDC10BQ8IUB3 73 aa12.93□□□□□ -0.34
PSPC1-206ENST00000619300 MIR7-3HGQ8N6C7 128 aa12.93□□□□□ -0.34
PSPC1-206ENST00000619300 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
PSPC1-206ENST00000619300 TRBV20-1A0A075B6N2 111 aa12.92□□□□□ -0.34
PSPC1-206ENST00000619300 GAGE12HA6NDE8 117 aa12.91□□□□□ -0.34
PSPC1-206ENST00000619300 KIAA0087Q14695 138 aa12.91□□□□□ -0.34
PSPC1-206ENST00000619300 TRBV30A0A0K0K1B3 111 aa12.9□□□□□ -0.34
PSPC1-206ENST00000619300 TCL1BO95988 128 aa12.9□□□□□ -0.34
PSPC1-206ENST00000619300 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
PSPC1-206ENST00000619300 CKS1BP61024 79 aa12.89□□□□□ -0.35
PSPC1-206ENST00000619300 C2orf82Q6UX34 121 aa12.89□□□□□ -0.35
PSPC1-206ENST00000619300 TRAV8-4A0A0B4J246 113 aa12.89□□□□□ -0.35
PSPC1-206ENST00000619300 PFN2P35080 140 aa12.89□□□□□ -0.35
PSPC1-206ENST00000619300 UBE2WQ96B02 151 aa12.89□□□□□ -0.35
PSPC1-206ENST00000619300 PRO0461Q9UI25 63 aa12.89□□□□□ -0.35
PSPC1-206ENST00000619300 CRPP02741 224 aa12.88□□□□□ -0.35
PSPC1-206ENST00000619300 RPL13AP40429 203 aaKnown RBP12.88□□□□□ -0.35
PSPC1-206ENST00000619300 WFDC2Q14508 124 aa12.88□□□□□ -0.35
PSPC1-206ENST00000619300 CFAP161Q6P656 301 aa12.88□□□□□ -0.35
PSPC1-206ENST00000619300 KLK5Q9Y337 293 aaPredicted RBP12.88□□□□□ -0.35
PSPC1-206ENST00000619300 CXCL5P42830 114 aa12.88□□□□□ -0.35
PSPC1-206ENST00000619300 TRIAP1O43715 76 aa12.87□□□□□ -0.35
PSPC1-206ENST00000619300 MTURNQ8N3F0 131 aa12.85□□□□□ -0.35
PSPC1-206ENST00000619300 CCL18P55774 89 aa12.84□□□□□ -0.35
PSPC1-206ENST00000619300 C15orf53Q8NAA6 179 aa12.84□□□□□ -0.35
PSPC1-206ENST00000619300 SND1-IT1Q9HBX3 110 aa12.84□□□□□ -0.35
PSPC1-206ENST00000619300 COX6CP09669 75 aa12.83□□□□□ -0.36
PSPC1-206ENST00000619300 SIGMAR1Q99720 223 aa12.83□□□□□ -0.36
PSPC1-206ENST00000619300 LINC01556Q5JQF7 62 aa12.83□□□□□ -0.36
PSPC1-206ENST00000619300 COX17Q14061 63 aa12.82□□□□□ -0.36
PSPC1-206ENST00000619300 SPAG11BQ08648 103 aa12.81□□□□□ -0.36
PSPC1-206ENST00000619300 TRAV13-2A0A0B4J235 113 aa12.8□□□□□ -0.36
PSPC1-206ENST00000619300 SMCPP49901 116 aaPredicted RBP12.8□□□□□ -0.36
PSPC1-206ENST00000619300 ATXN8Q156A1 80 aa12.8□□□□□ -0.36
PSPC1-206ENST00000619300 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
PSPC1-206ENST00000619300 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
PSPC1-206ENST00000619300 HUWE1Q7Z6Z7 4374 aaKnown RBP12.79□□□□□ -0.36
PSPC1-206ENST00000619300 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
PSPC1-206ENST00000619300 C6orf223Q8N319 242 aa12.79□□□□□ -0.36
PSPC1-206ENST00000619300 ETDBQ3ZM63 59 aa12.78□□□□□ -0.36
PSPC1-206ENST00000619300 DNAH10OSP0CZ25 163 aa12.78□□□□□ -0.36
PSPC1-206ENST00000619300 UNQ6190/PRO20217Q6UXQ8 127 aa12.78□□□□□ -0.36
PSPC1-206ENST00000619300 C9orf116Q5BN46 136 aaPredicted RBP12.77□□□□□ -0.37
PSPC1-206ENST00000619300 LINC00337Q8N6G1 96 aa12.77□□□□□ -0.37
PSPC1-206ENST00000619300 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.37
PSPC1-206ENST00000619300 C10orf25Q5T742 122 aa12.76□□□□□ -0.37
PSPC1-206ENST00000619300 LINC00588Q9Y4M8 146 aa12.76□□□□□ -0.37
PSPC1-206ENST00000619300 C9JAW5 83 aa12.74□□□□□ -0.37
PSPC1-206ENST00000619300 LINC01620Q4KN68 170 aa12.74□□□□□ -0.37
PSPC1-206ENST00000619300 NTN5Q8WTR8 489 aaPredicted RBP12.74□□□□□ -0.37
PSPC1-206ENST00000619300 CLEC2BQ92478 149 aa12.74□□□□□ -0.37
PSPC1-206ENST00000619300 C1orf43Q9BWL3 253 aa12.74□□□□□ -0.37
PSPC1-206ENST00000619300 SLC25A20O43772 301 aa12.72□□□□□ -0.37
PSPC1-206ENST00000619300 B9D2Q9BPU9 175 aa12.72□□□□□ -0.37
PSPC1-206ENST00000619300 LST1O00453 97 aa12.72□□□□□ -0.37
PSPC1-206ENST00000619300 GVQW2A0A096LPI5 108 aaPredicted RBP12.71□□□□□ -0.37
PSPC1-206ENST00000619300 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.37
PSPC1-206ENST00000619300 MUC7Q8TAX7 377 aa12.71□□□□□ -0.37
PSPC1-206ENST00000619300 IGKV2D-24A0A075B6R9 120 aa12.7□□□□□ -0.38
PSPC1-206ENST00000619300 ZNF561-AS1K7EIQ3 104 aa12.7□□□□□ -0.38
PSPC1-206ENST00000619300 M0QXV9 152 aa12.7□□□□□ -0.38
PSPC1-206ENST00000619300 NDUFC2O95298 119 aa12.69□□□□□ -0.38
PSPC1-206ENST00000619300 TRBV10-2A0A0K0K1G8 114 aa12.68□□□□□ -0.38
PSPC1-206ENST00000619300 HIGD2BQ4VC39 106 aa12.68□□□□□ -0.38
PSPC1-206ENST00000619300 C15orf56Q8N910 161 aa12.68□□□□□ -0.38
PSPC1-206ENST00000619300 A0A1B0GV72 72 aa12.67□□□□□ -0.38
PSPC1-206ENST00000619300 TEN1Q86WV5 123 aa12.67□□□□□ -0.38
PSPC1-206ENST00000619300 ANKRD29Q8N6D5 301 aa12.67□□□□□ -0.38
PSPC1-206ENST00000619300 OR13C6PQ8NH95 151 aa12.67□□□□□ -0.38
PSPC1-206ENST00000619300 SMIM11BQ8TCY0 68 aa12.67□□□□□ -0.38
PSPC1-206ENST00000619300 C6orf48Q9UBA6 75 aa12.67□□□□□ -0.38
PSPC1-206ENST00000619300 LINC01600Q96MT4 127 aa12.67□□□□□ -0.38
PSPC1-206ENST00000619300 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
PSPC1-206ENST00000619300 UPK3BQ9BT76 320 aa12.66□□□□□ -0.38
PSPC1-206ENST00000619300 Q9HAA7 133 aa12.66□□□□□ -0.38
PSPC1-206ENST00000619300 PRR3P79522 188 aaKnown RBP12.66□□□□□ -0.38
PSPC1-206ENST00000619300 CAMK2N2Q96S95 79 aa12.66□□□□□ -0.38
PSPC1-206ENST00000619300 COL7A1Q02388 2944 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms