RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 PRR26Q8N8Z3 221 aa13.43□□□□□ -0.26
NEDD4L-237ENST00000617539 ALKBH7Q9BT30 221 aaPredicted RBP13.43□□□□□ -0.26
NEDD4L-237ENST00000617539 UBE2BP63146 152 aa13.42□□□□□ -0.26
NEDD4L-237ENST00000617539 PAPPA-AS1Q5QFB9 102 aa13.42□□□□□ -0.26
NEDD4L-237ENST00000617539 LINC00469Q8N7U9 141 aa13.42□□□□□ -0.26
NEDD4L-237ENST00000617539 KRTAP1-4P0C5Y4 121 aa13.41□□□□□ -0.26
NEDD4L-237ENST00000617539 G0S2P27469 103 aa13.41□□□□□ -0.26
NEDD4L-237ENST00000617539 SEC11AP67812 179 aa13.41□□□□□ -0.26
NEDD4L-237ENST00000617539 ERASQ7Z444 233 aa13.41□□□□□ -0.26
NEDD4L-237ENST00000617539 LINC01546A6NGU7 62 aa13.4□□□□□ -0.26
NEDD4L-237ENST00000617539 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.26
NEDD4L-237ENST00000617539 SCGB3A1Q96QR1 104 aa13.39□□□□□ -0.27
NEDD4L-237ENST00000617539 GNB1LQ9BYB4 327 aa13.39□□□□□ -0.27
NEDD4L-237ENST00000617539 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
NEDD4L-237ENST00000617539 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
NEDD4L-237ENST00000617539 F8VRH5 84 aa13.38□□□□□ -0.27
NEDD4L-237ENST00000617539 SEC11CQ9BY50 192 aa13.38□□□□□ -0.27
NEDD4L-237ENST00000617539 C22orf24Q9Y442 160 aa13.36□□□□□ -0.27
NEDD4L-237ENST00000617539 IGLV5-45A0A087WSX0 123 aa13.35□□□□□ -0.27
NEDD4L-237ENST00000617539 TINCRA0A1B0GVN0 87 aa13.35□□□□□ -0.27
NEDD4L-237ENST00000617539 S100PP25815 95 aa13.34□□□□□ -0.27
NEDD4L-237ENST00000617539 LPAP08519 4548 aa13.34□□□□□ -0.27
NEDD4L-237ENST00000617539 CST9LQ9H4G1 147 aa13.33□□□□□ -0.28
NEDD4L-237ENST00000617539 CXCL5P42830 114 aa13.32□□□□□ -0.28
NEDD4L-237ENST00000617539 PDZD11Q5EBL8 140 aa13.32□□□□□ -0.28
NEDD4L-237ENST00000617539 IGLV1-50A0A075B6I6 118 aa13.31□□□□□ -0.28
NEDD4L-237ENST00000617539 C10orf91Q5T1B1 145 aa13.31□□□□□ -0.28
NEDD4L-237ENST00000617539 COMMD7Q86VX2 200 aa13.31□□□□□ -0.28
NEDD4L-237ENST00000617539 COX7B2Q8TF08 81 aa13.31□□□□□ -0.28
NEDD4L-237ENST00000617539 MRPL18Q9H0U6 180 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-237ENST00000617539 LINC01549A6NIU2 74 aa13.29□□□□□ -0.28
NEDD4L-237ENST00000617539 SPINK8P0C7L1 97 aa13.29□□□□□ -0.28
NEDD4L-237ENST00000617539 TP73-AS1Q9UF72 201 aa13.29□□□□□ -0.28
NEDD4L-237ENST00000617539 ZNF861PO60384 105 aa13.28□□□□□ -0.28
NEDD4L-237ENST00000617539 FABP9Q0Z7S8 132 aa13.28□□□□□ -0.28
NEDD4L-237ENST00000617539 PMVKQ15126 192 aa13.28□□□□□ -0.28
NEDD4L-237ENST00000617539 COX19Q49B96 90 aa13.28□□□□□ -0.28
NEDD4L-237ENST00000617539 LBHQ53QV2 105 aaPredicted RBP13.28□□□□□ -0.28
NEDD4L-237ENST00000617539 MRPL55Q7Z7F7 128 aaKnown RBP13.28□□□□□ -0.28
NEDD4L-237ENST00000617539 A0A096LNJ9 63 aa13.27□□□□□ -0.29
NEDD4L-237ENST00000617539 NUPR1O60356 82 aa13.27□□□□□ -0.29
NEDD4L-237ENST00000617539 FA2HQ7L5A8 372 aa13.27□□□□□ -0.29
NEDD4L-237ENST00000617539 CARHSP1Q9Y2V2 147 aaKnown RBP13.27□□□□□ -0.29
NEDD4L-237ENST00000617539 RHEBQ15382 184 aa13.25□□□□□ -0.29
NEDD4L-237ENST00000617539 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
NEDD4L-237ENST00000617539 RPS10P5Q9NQ39 176 aa13.25□□□□□ -0.29
NEDD4L-237ENST00000617539 SMCO4Q9NRQ5 59 aa13.25□□□□□ -0.29
NEDD4L-237ENST00000617539 LINC00167Q96N53 147 aa13.23□□□□□ -0.29
NEDD4L-237ENST00000617539 RAB5BP61020 215 aa13.22□□□□□ -0.29
NEDD4L-237ENST00000617539 RPL37AP8A6NKH3 93 aa13.21□□□□□ -0.29
NEDD4L-237ENST00000617539 BCE1O60756 84 aa13.21□□□□□ -0.29
NEDD4L-237ENST00000617539 IGLC3P0DOY3 106 aa13.21□□□□□ -0.29
NEDD4L-237ENST00000617539 RPL13AP40429 203 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-237ENST00000617539 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
NEDD4L-237ENST00000617539 IGLV5-39A0A0G2JS06 123 aa13.2□□□□□ -0.3
NEDD4L-237ENST00000617539 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
NEDD4L-237ENST00000617539 GAGE10A6NGK3 116 aa13.19□□□□□ -0.3
NEDD4L-237ENST00000617539 H3BRM9 83 aa13.18□□□□□ -0.3
NEDD4L-237ENST00000617539 ZNF22P17026 224 aaPredicted RBP13.18□□□□□ -0.3
NEDD4L-237ENST00000617539 PMCHL1Q16048 86 aa13.17□□□□□ -0.3
NEDD4L-237ENST00000617539 A0A087X002 238 aa13.16□□□□□ -0.3
NEDD4L-237ENST00000617539 ATP5LO75964 103 aa13.16□□□□□ -0.3
NEDD4L-237ENST00000617539 LINC00614P0C842 121 aa13.16□□□□□ -0.3
NEDD4L-237ENST00000617539 RPL28P46779 137 aaKnown RBP13.16□□□□□ -0.3
NEDD4L-237ENST00000617539 NDUFA6P56556 154 aa13.16□□□□□ -0.3
NEDD4L-237ENST00000617539 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
NEDD4L-237ENST00000617539 SCO1O75880 301 aa13.15□□□□□ -0.3
NEDD4L-237ENST00000617539 KRTAP13-1Q8IUC0 172 aa13.15□□□□□ -0.3
NEDD4L-237ENST00000617539 HBDP02042 147 aa13.14□□□□□ -0.31
NEDD4L-237ENST00000617539 PFN2P35080 140 aa13.14□□□□□ -0.31
NEDD4L-237ENST00000617539 NKAPP1Q8N9T2 125 aa13.12□□□□□ -0.31
NEDD4L-237ENST00000617539 C11orf86A6NJI1 115 aa13.11□□□□□ -0.31
NEDD4L-237ENST00000617539 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
NEDD4L-237ENST00000617539 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
NEDD4L-237ENST00000617539 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
NEDD4L-237ENST00000617539 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
NEDD4L-237ENST00000617539 APOC3P02656 99 aa13.09□□□□□ -0.31
NEDD4L-237ENST00000617539 VPREB1P12018 145 aa13.09□□□□□ -0.31
NEDD4L-237ENST00000617539 Q8NDZ9 215 aa13.09□□□□□ -0.31
NEDD4L-237ENST00000617539 ANAPC11Q9NYG5 84 aa13.09□□□□□ -0.31
NEDD4L-237ENST00000617539 PRR4Q16378 134 aa13.08□□□□□ -0.32
NEDD4L-237ENST00000617539 BAGE3Q86Y29 109 aa13.08□□□□□ -0.32
NEDD4L-237ENST00000617539 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
NEDD4L-237ENST00000617539 YPEL4Q96NS1 127 aa13.06□□□□□ -0.32
NEDD4L-237ENST00000617539 TSPAN13O95857 204 aa13.05□□□□□ -0.32
NEDD4L-237ENST00000617539 CRYGAP11844 174 aa13.05□□□□□ -0.32
NEDD4L-237ENST00000617539 UBE2AP49459 152 aa13.05□□□□□ -0.32
NEDD4L-237ENST00000617539 COX17Q14061 63 aa13.05□□□□□ -0.32
NEDD4L-237ENST00000617539 KRTAP13-2Q52LG2 175 aa13.05□□□□□ -0.32
NEDD4L-237ENST00000617539 TMEM170BQ5T4T1 132 aa13.05□□□□□ -0.32
NEDD4L-237ENST00000617539 SVBPQ8N300 66 aa13.04□□□□□ -0.32
NEDD4L-237ENST00000617539 TMEM238C9JI98 176 aa13.03□□□□□ -0.32
NEDD4L-237ENST00000617539 SNAPINO95295 136 aa13.03□□□□□ -0.32
NEDD4L-237ENST00000617539 TYMSOSQ8TAI1 123 aa13.03□□□□□ -0.32
NEDD4L-237ENST00000617539 PRLHP81277 87 aa13.02□□□□□ -0.33
NEDD4L-237ENST00000617539 TMEM126AQ9H061 195 aa13.02□□□□□ -0.33
NEDD4L-237ENST00000617539 CHTOPQ9Y3Y2 248 aaKnown RBP13.01□□□□□ -0.33
NEDD4L-237ENST00000617539 M0R378 163 aa12.99□□□□□ -0.33
NEDD4L-237ENST00000617539 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
NEDD4L-237ENST00000617539 NDUFA5Q16718 116 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms