RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SPG11Q96JI7 2443 aa10.71□□□□□ -0.69
GPN1-212ENST00000616939 IGLV1-51P01701 117 aa10.71□□□□□ -0.69
GPN1-212ENST00000616939 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.69
GPN1-212ENST00000616939 TRAV7A0A075B6U4 112 aa10.7□□□□□ -0.7
GPN1-212ENST00000616939 CD164L2Q6UWJ8 174 aa10.7□□□□□ -0.7
GPN1-212ENST00000616939 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
GPN1-212ENST00000616939 EPM2AB3EWF7 344 aa10.7□□□□□ -0.7
GPN1-212ENST00000616939 PDE6GP18545 87 aa10.69□□□□□ -0.7
GPN1-212ENST00000616939 Q5XG85 94 aa10.69□□□□□ -0.7
GPN1-212ENST00000616939 GYPEP15421 78 aa10.68□□□□□ -0.7
GPN1-212ENST00000616939 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
GPN1-212ENST00000616939 VPS13CQ709C8 3753 aa10.68□□□□□ -0.7
GPN1-212ENST00000616939 C6orf99Q4VX62 202 aa10.68□□□□□ -0.7
GPN1-212ENST00000616939 LINC00482Q8N8I6 264 aa10.68□□□□□ -0.7
GPN1-212ENST00000616939 WFDC10AQ9H1F0 79 aa10.68□□□□□ -0.7
GPN1-212ENST00000616939 FAM236DA0A1B0GTK5 79 aa10.67□□□□□ -0.7
GPN1-212ENST00000616939 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
GPN1-212ENST00000616939 FAM236CP0DP71 79 aa10.67□□□□□ -0.7
GPN1-212ENST00000616939 C9orf66Q5T8R8 295 aa10.67□□□□□ -0.7
GPN1-212ENST00000616939 WFDC9Q8NEX5 89 aa10.67□□□□□ -0.7
GPN1-212ENST00000616939 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
GPN1-212ENST00000616939 DEFB113Q30KQ7 82 aa10.65□□□□□ -0.7
GPN1-212ENST00000616939 ANKRD17O75179 2603 aaKnown RBP10.65□□□□□ -0.7
GPN1-212ENST00000616939 PLA2G2AP14555 144 aa10.65□□□□□ -0.71
GPN1-212ENST00000616939 SERP1Q9Y6X1 66 aa10.65□□□□□ -0.71
GPN1-212ENST00000616939 CXCL6P80162 114 aa10.64□□□□□ -0.71
GPN1-212ENST00000616939 C20orf197Q8N268 126 aa10.64□□□□□ -0.71
GPN1-212ENST00000616939 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
GPN1-212ENST00000616939 KLKP1Q107X0 134 aa10.63□□□□□ -0.71
GPN1-212ENST00000616939 CHCHD10Q8WYQ3 142 aaPredicted RBP10.63□□□□□ -0.71
GPN1-212ENST00000616939 C16orf95Q9H693 158 aa10.63□□□□□ -0.71
GPN1-212ENST00000616939 NOTCH3Q9UM47 2321 aa10.63□□□□□ -0.71
GPN1-212ENST00000616939 LINC01547P58512 204 aaPredicted RBP10.63□□□□□ -0.71
GPN1-212ENST00000616939 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
GPN1-212ENST00000616939 Q8NDZ9 215 aa10.62□□□□□ -0.71
GPN1-212ENST00000616939 H7BZZ5 65 aa10.61□□□□□ -0.71
GPN1-212ENST00000616939 Q6ZVQ6 151 aa10.61□□□□□ -0.71
GPN1-212ENST00000616939 DEFB130BP0DP73 79 aa10.61□□□□□ -0.71
GPN1-212ENST00000616939 DEFB130AP0DP74 79 aa10.61□□□□□ -0.71
GPN1-212ENST00000616939 CLPSL2Q6UWE3 100 aa10.61□□□□□ -0.71
GPN1-212ENST00000616939 C4orf26Q17RF5 130 aa10.6□□□□□ -0.71
GPN1-212ENST00000616939 C2CD3Q4AC94 2353 aa10.59□□□□□ -0.71
GPN1-212ENST00000616939 A0A0J9YWU9 116 aa10.59□□□□□ -0.71
GPN1-212ENST00000616939 IGHV4-30-4P0DP06 118 aa10.59□□□□□ -0.71
GPN1-212ENST00000616939 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
GPN1-212ENST00000616939 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
GPN1-212ENST00000616939 CRYBG3Q68DQ2 2970 aa10.58□□□□□ -0.72
GPN1-212ENST00000616939 KRTAP1-3Q8IUG1 177 aa10.58□□□□□ -0.72
GPN1-212ENST00000616939 REG3AQ06141 175 aa10.58□□□□□ -0.72
GPN1-212ENST00000616939 ESM1Q9NQ30 184 aa10.58□□□□□ -0.72
GPN1-212ENST00000616939 NCOR2Q9Y618 2525 aa10.58□□□□□ -0.72
GPN1-212ENST00000616939 GVQW2A0A096LPI5 108 aaPredicted RBP10.57□□□□□ -0.72
GPN1-212ENST00000616939 LYRM9A8MSI8 78 aa10.57□□□□□ -0.72
GPN1-212ENST00000616939 C9orf116Q5BN46 136 aaPredicted RBP10.57□□□□□ -0.72
GPN1-212ENST00000616939 BBC3Q96PG8 261 aaPredicted RBP10.57□□□□□ -0.72
GPN1-212ENST00000616939 X6R8D5 127 aa10.57□□□□□ -0.72
GPN1-212ENST00000616939 WNK1Q9H4A3 2382 aa10.57□□□□□ -0.72
GPN1-212ENST00000616939 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
GPN1-212ENST00000616939 RNASE1P07998 156 aaKnown RBP10.56□□□□□ -0.72
GPN1-212ENST00000616939 HRCT1Q6UXD1 115 aa10.56□□□□□ -0.72
GPN1-212ENST00000616939 AKAP9Q99996 3911 aa10.56□□□□□ -0.72
GPN1-212ENST00000616939 USP9YO00507 2555 aaPredicted RBP10.56□□□□□ -0.72
GPN1-212ENST00000616939 NDUFC1O43677 76 aa10.56□□□□□ -0.72
GPN1-212ENST00000616939 KRTAP10-9P60411 292 aa10.56□□□□□ -0.72
GPN1-212ENST00000616939 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.56□□□□□ -0.72
GPN1-212ENST00000616939 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
GPN1-212ENST00000616939 TRBV7-4A0A0J9YYF1 115 aa10.55□□□□□ -0.72
GPN1-212ENST00000616939 M0R2N4 97 aa10.55□□□□□ -0.72
GPN1-212ENST00000616939 ATP5EP56381 51 aaPredicted RBP10.55□□□□□ -0.72
GPN1-212ENST00000616939 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
GPN1-212ENST00000616939 COL12A1Q99715 3063 aa10.54□□□□□ -0.72
GPN1-212ENST00000616939 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
GPN1-212ENST00000616939 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
GPN1-212ENST00000616939 ANGP03950 147 aaKnown RBP10.54□□□□□ -0.72
GPN1-212ENST00000616939 HAMPP81172 84 aa10.54□□□□□ -0.72
GPN1-212ENST00000616939 Q6ZQY7 126 aa10.54□□□□□ -0.72
GPN1-212ENST00000616939 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
GPN1-212ENST00000616939 MXRA5Q9NR99 2828 aa10.53□□□□□ -0.72
GPN1-212ENST00000616939 TRAV10A0A0B4J240 114 aa10.53□□□□□ -0.72
GPN1-212ENST00000616939 ZNF843Q8N446 348 aa10.53□□□□□ -0.72
GPN1-212ENST00000616939 DIRC1Q969H9 104 aa10.53□□□□□ -0.72
GPN1-212ENST00000616939 CELSR2Q9HCU4 2923 aa10.53□□□□□ -0.72
GPN1-212ENST00000616939 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.73
GPN1-212ENST00000616939 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
GPN1-212ENST00000616939 UNQ6190/PRO20217Q6UXQ8 127 aa10.51□□□□□ -0.73
GPN1-212ENST00000616939 SPATA3Q8NHX4 192 aa10.51□□□□□ -0.73
GPN1-212ENST00000616939 ERC2-IT1O76042 136 aa10.51□□□□□ -0.73
GPN1-212ENST00000616939 IGLV10-54A0A075B6I4 117 aa10.5□□□□□ -0.73
GPN1-212ENST00000616939 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
GPN1-212ENST00000616939 CHD8Q9HCK8 2581 aa10.5□□□□□ -0.73
GPN1-212ENST00000616939 SMIM26A0A096LP01 95 aa10.49□□□□□ -0.73
GPN1-212ENST00000616939 A0A096LPF7 62 aa10.49□□□□□ -0.73
GPN1-212ENST00000616939 PKD1L2Q7Z442 2459 aa10.49□□□□□ -0.73
GPN1-212ENST00000616939 ZANQ9Y493 2812 aa10.49□□□□□ -0.73
GPN1-212ENST00000616939 CYSRT1A8MQ03 144 aa10.49□□□□□ -0.73
GPN1-212ENST00000616939 COX7BP24311 80 aa10.49□□□□□ -0.73
GPN1-212ENST00000616939 CHD6Q8TD26 2715 aa10.49□□□□□ -0.73
GPN1-212ENST00000616939 ELOF1P60002 83 aaKnown RBP10.48□□□□□ -0.73
GPN1-212ENST00000616939 Q8N3U1 123 aa10.48□□□□□ -0.73
GPN1-212ENST00000616939 RMI2Q96E14 147 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms