RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 FABP7O15540 132 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 STX6O43752 255 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 TIMM8AO60220 97 aaPredicted RBP-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 FTH1P02794 183 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 CCL2P13500 99 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 HTN1P15515 57 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 CXCL2P19875 107 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 CKS2P33552 79 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 RPL35P42766 123 aaKnown RBP-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 MRPS25P82663 173 aaKnown RBP-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 BST2Q10589 180 aaKnown RBP-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 RGS21Q2M5E4 152 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 CCDC58Q4VC31 144 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 LYRM7Q5U5X0 104 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 MIC13Q5XKP0 118 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 HBMQ6B0K9 141 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 CNPY4Q8N129 248 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 SMIM12Q96EX1 92 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 MED10Q9BTT4 135 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 TMEM191AQ9H0A3 160 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 FAM96AQ9H5X1 160 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 C6orf48Q9UBA6 75 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 STX8Q9UNK0 236 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 LAMTOR2Q9Y2Q5 125 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 BZW2Q9Y6E2 419 aaKnown RBP-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 MYO5CQ9NQX4 1742 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 LTN1O94822 1766 aa-1.98□□□□□ -2.73
SOX2-OT-236ENST00000616401 RAPGEF2Q9Y4G8 1499 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 DEFB131BA0A096LNP1 70 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 TRBV11-1A0A0K0K1C0 115 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 FAM24AA6NFZ4 105 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 F5H5K5 113 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 CHKB-CPT1BH3BT56 60 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 CHP2O43745 196 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 SPAG6O75602 509 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 COX5BP10606 129 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 GNGT1P63211 74 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 HBBP68871 147 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 NUCB2P80303 420 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 CBX1P83916 185 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 SMIM21Q3B7S5 101 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 CLVS2Q5SYC1 327 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 C10orf128Q5T292 105 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 SPANXN1Q5VSR9 72 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 GPATCH11Q8N954 259 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 ATP6V0E2Q8NHE4 81 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 CCDC43Q96MW1 224 aaKnown RBP-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 MPHOSPH6Q99547 160 aaKnown RBP-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 DKKL1Q9UK85 242 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 ODF2LQ9ULJ1 636 aa-1.99□□□□□ -2.73
SOX2-OT-236ENST00000616401 RRBP1Q9P2E9 1410 aaKnown RBP-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 FANCAO15360 1455 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 SNCGO76070 127 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 CXCL1P09341 107 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 FCER1GP30273 86 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 LSM3P62310 102 aaKnown RBP-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 STX4Q12846 297 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 IL18Q14116 193 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 TRAM1Q15629 374 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 ATP6V1FQ16864 119 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 LINC01545Q5VT33 79 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 TMED4Q7Z7H5 227 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 PDCL2Q8N4E4 241 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 DEFB124Q8NES8 71 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 CCDC124Q96CT7 223 aaKnown RBP-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 TSGA13Q96PP4 275 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 SEC11CQ9BY50 192 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 HPCAL4Q9UM19 191 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 MROH1Q8NDA8 1641 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 ALS2Q96Q42 1657 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 OVOS2A0A0J9YW53 1432 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 OVOS2Q6IE36 1432 aa-2□□□□□ -2.73
SOX2-OT-236ENST00000616401 LMTK2Q8IWU2 1503 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 DIP2BQ9P265 1576 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 MROH2AA6NES4 1674 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 TMEM218A2RU14 115 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 PCP4L1A6NKN8 68 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 J3QLW9 94 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 CALUO43852 315 aaPredicted RBP-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 SLC25A5P05141 298 aaKnown RBP-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 TSPAN19P0C672 248 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 GAP43P17677 238 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 SNRPD2P62316 118 aaKnown RBP-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 ARF5P84085 180 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 HIST1H1AQ02539 215 aaPredicted RBP-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 DNAJC3Q13217 504 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 C4orf50Q6ZRC1 276 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 SLC51BQ86UW2 128 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 DEFB107AQ8IZN7 70 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 FAM107BQ9H098 131 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 EXO5Q9H790 373 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 IL20Q9NYY1 176 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 ARL2-SNX15V9GYD0 113 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 CCNB3Q8WWL7 1395 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 ANKARQ7Z5J8 1434 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 RALGAPBQ86X10 1494 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 ARHGAP5Q13017 1502 aa-2.01□□□□□ -2.73
SOX2-OT-236ENST00000616401 TRAV13-2A0A0B4J235 113 aa-2.02□□□□□ -2.73
SOX2-OT-236ENST00000616401 TRAV4A0A0B4J268 109 aa-2.02□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms