RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PIEZO2Q9H5I5 2752 aa13.46□□□□□ -0.26
SPAST-203ENST00000615843 PRRC2AP48634 2157 aaKnown RBP13.45□□□□□ -0.26
SPAST-203ENST00000615843 LINC00575Q6W349 94 aa13.45□□□□□ -0.26
SPAST-203ENST00000615843 LINC01006Q8NI28 216 aa13.45□□□□□ -0.26
SPAST-203ENST00000615843 SPINK6Q6UWN8 80 aa13.44□□□□□ -0.26
SPAST-203ENST00000615843 BRI3O95415 125 aa13.44□□□□□ -0.26
SPAST-203ENST00000615843 SBSPONQ8IVN8 264 aa13.44□□□□□ -0.26
SPAST-203ENST00000615843 AVPP01185 164 aa13.43□□□□□ -0.26
SPAST-203ENST00000615843 CDSNQ15517 529 aa13.42□□□□□ -0.26
SPAST-203ENST00000615843 COL5A1P20908 1838 aaPredicted RBP13.42□□□□□ -0.26
SPAST-203ENST00000615843 FHL2Q14192 279 aa13.41□□□□□ -0.26
SPAST-203ENST00000615843 IGLV5-39A0A0G2JS06 123 aa13.41□□□□□ -0.26
SPAST-203ENST00000615843 RPS28P62857 69 aaKnown RBP13.41□□□□□ -0.26
SPAST-203ENST00000615843 CCDC168Q8NDH2 2452 aa13.41□□□□□ -0.26
SPAST-203ENST00000615843 Q8N2B8 174 aa13.4□□□□□ -0.26
SPAST-203ENST00000615843 ESRGQ1W209 222 aa13.4□□□□□ -0.26
SPAST-203ENST00000615843 WDR87Q6ZQQ6 2873 aa13.4□□□□□ -0.27
SPAST-203ENST00000615843 LINC00315P59091 139 aa13.39□□□□□ -0.27
SPAST-203ENST00000615843 CXCL6P80162 114 aa13.39□□□□□ -0.27
SPAST-203ENST00000615843 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
SPAST-203ENST00000615843 A8MTW9 85 aa13.38□□□□□ -0.27
SPAST-203ENST00000615843 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
SPAST-203ENST00000615843 TRAV10A0A0B4J240 114 aa13.37□□□□□ -0.27
SPAST-203ENST00000615843 C4orf26Q17RF5 130 aa13.36□□□□□ -0.27
SPAST-203ENST00000615843 ABCA2Q9BZC7 2435 aa13.36□□□□□ -0.27
SPAST-203ENST00000615843 ZNF706Q9Y5V0 76 aaPredicted RBP13.36□□□□□ -0.27
SPAST-203ENST00000615843 C6orf223Q8N319 242 aa13.36□□□□□ -0.27
SPAST-203ENST00000615843 IGLV9-49A0A0B4J1Y8 123 aa13.35□□□□□ -0.27
SPAST-203ENST00000615843 A0A1B0GUV1 79 aa13.35□□□□□ -0.27
SPAST-203ENST00000615843 C10orf25Q5T742 122 aa13.34□□□□□ -0.27
SPAST-203ENST00000615843 PLAC8L1A1L4L8 177 aa13.34□□□□□ -0.27
SPAST-203ENST00000615843 RETNQ9HD89 108 aa13.34□□□□□ -0.27
SPAST-203ENST00000615843 LINC01561Q8N1V8 128 aa13.32□□□□□ -0.28
SPAST-203ENST00000615843 FAM218AQ96MZ4 157 aa13.32□□□□□ -0.28
SPAST-203ENST00000615843 ADAMTS20P59510 1910 aa13.31□□□□□ -0.28
SPAST-203ENST00000615843 H0Y9P7 68 aa13.3□□□□□ -0.28
SPAST-203ENST00000615843 BCE1O60756 84 aa13.3□□□□□ -0.28
SPAST-203ENST00000615843 REG3GQ6UW15 175 aa13.29□□□□□ -0.28
SPAST-203ENST00000615843 IGLV1-51P01701 117 aa13.29□□□□□ -0.28
SPAST-203ENST00000615843 TLN1Q9Y490 2541 aaKnown RBP13.29□□□□□ -0.28
SPAST-203ENST00000615843 INAFM1C9JVW0 142 aa13.29□□□□□ -0.28
SPAST-203ENST00000615843 PCOTHQ58A44 107 aa13.28□□□□□ -0.28
SPAST-203ENST00000615843 FAM19A4Q96LR4 140 aa13.28□□□□□ -0.28
SPAST-203ENST00000615843 HCG22E2RYF7 251 aa13.27□□□□□ -0.28
SPAST-203ENST00000615843 A0A087WSZ3 146 aa13.27□□□□□ -0.28
SPAST-203ENST00000615843 RAI1Q7Z5J4 1906 aaPredicted RBP13.27□□□□□ -0.28
SPAST-203ENST00000615843 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.29
SPAST-203ENST00000615843 IGLV5-45A0A087WSX0 123 aa13.26□□□□□ -0.29
SPAST-203ENST00000615843 SPATA3Q8NHX4 192 aa13.26□□□□□ -0.29
SPAST-203ENST00000615843 IGF2RP11717 2491 aa13.26□□□□□ -0.29
SPAST-203ENST00000615843 IGHV3OR16-9A0A0B4J2B5 98 aa13.25□□□□□ -0.29
SPAST-203ENST00000615843 hDV103S1A0JD37 113 aa13.25□□□□□ -0.29
SPAST-203ENST00000615843 IL17DQ8TAD2 202 aa13.25□□□□□ -0.29
SPAST-203ENST00000615843 C11orf72Q8NBR9 251 aa13.25□□□□□ -0.29
SPAST-203ENST00000615843 DEFB116Q30KQ4 102 aa13.24□□□□□ -0.29
SPAST-203ENST00000615843 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
SPAST-203ENST00000615843 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
SPAST-203ENST00000615843 SMIM29Q86T20 159 aa13.22□□□□□ -0.29
SPAST-203ENST00000615843 C2orf48Q96LS8 159 aa13.21□□□□□ -0.29
SPAST-203ENST00000615843 Q9BRP9 147 aa13.21□□□□□ -0.29
SPAST-203ENST00000615843 IGHV6-1A0A0B4J1U7 121 aa13.21□□□□□ -0.3
SPAST-203ENST00000615843 C7orf33Q8WU49 177 aa13.2□□□□□ -0.3
SPAST-203ENST00000615843 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
SPAST-203ENST00000615843 LIMD2Q9BT23 127 aa13.19□□□□□ -0.3
SPAST-203ENST00000615843 PLA2G2AP14555 144 aa13.18□□□□□ -0.3
SPAST-203ENST00000615843 F8WDY8 70 aa13.18□□□□□ -0.3
SPAST-203ENST00000615843 DOPEY1Q5JWR5 2465 aa13.18□□□□□ -0.3
SPAST-203ENST00000615843 Q6ZRU5 148 aa13.17□□□□□ -0.3
SPAST-203ENST00000615843 FHL3Q13643 280 aa13.16□□□□□ -0.3
SPAST-203ENST00000615843 Q6ZQT0 140 aa13.15□□□□□ -0.3
SPAST-203ENST00000615843 Q9UF83 564 aa13.15□□□□□ -0.3
SPAST-203ENST00000615843 C1orf64Q8NEQ6 169 aa13.15□□□□□ -0.31
SPAST-203ENST00000615843 LY6G6DO95868 133 aa13.14□□□□□ -0.31
SPAST-203ENST00000615843 SMCR5Q8TEV8 140 aa13.14□□□□□ -0.31
SPAST-203ENST00000615843 NCOR2Q9Y618 2525 aa13.14□□□□□ -0.31
SPAST-203ENST00000615843 LITAFQ99732 161 aa13.14□□□□□ -0.31
SPAST-203ENST00000615843 KIAA0087Q14695 138 aa13.13□□□□□ -0.31
SPAST-203ENST00000615843 LYPD5Q6UWN5 251 aa13.12□□□□□ -0.31
SPAST-203ENST00000615843 Q6ZTC4 211 aa13.11□□□□□ -0.31
SPAST-203ENST00000615843 FN1P02751 2386 aaKnown RBP13.11□□□□□ -0.31
SPAST-203ENST00000615843 PTPRBP23467 1997 aa13.11□□□□□ -0.31
SPAST-203ENST00000615843 LOC110117498A0A087WWA1 95 aa13.11□□□□□ -0.31
SPAST-203ENST00000615843 M0R2N4 97 aa13.1□□□□□ -0.31
SPAST-203ENST00000615843 NHLRC4P0CG21 123 aaPredicted RBP13.1□□□□□ -0.31
SPAST-203ENST00000615843 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
SPAST-203ENST00000615843 TM2D3Q9BRN9 247 aa13.09□□□□□ -0.31
SPAST-203ENST00000615843 USP9XQ93008 2570 aaPredicted RBP13.08□□□□□ -0.32
SPAST-203ENST00000615843 PRLHP81277 87 aa13.05□□□□□ -0.32
SPAST-203ENST00000615843 TLN2Q9Y4G6 2542 aa13.05□□□□□ -0.32
SPAST-203ENST00000615843 CIRBP-AS1Q8TBR5 109 aa13.05□□□□□ -0.32
SPAST-203ENST00000615843 SETD2Q9BYW2 2564 aaPredicted RBP13.04□□□□□ -0.32
SPAST-203ENST00000615843 ELOF1P60002 83 aaKnown RBP13.03□□□□□ -0.32
SPAST-203ENST00000615843 C22orf24Q9Y442 160 aa13.03□□□□□ -0.32
SPAST-203ENST00000615843 KRTAP10-9P60411 292 aa13.03□□□□□ -0.32
SPAST-203ENST00000615843 C6orf48Q9UBA6 75 aa13.02□□□□□ -0.32
SPAST-203ENST00000615843 RETNLBQ9BQ08 111 aa13.02□□□□□ -0.33
SPAST-203ENST00000615843 C16orf95Q9H693 158 aa13.02□□□□□ -0.33
SPAST-203ENST00000615843 A0A1B0GW54 56 aa13.02□□□□□ -0.33
SPAST-203ENST00000615843 ABCA12Q86UK0 2595 aa13.01□□□□□ -0.33
SPAST-203ENST00000615843 SPINK1P00995 79 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms