RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 NOTCH1P46531 2555 aa13.22□□□□□ -0.29
MMP28-204ENST00000615136 IGHV3OR16-9A0A0B4J2B5 98 aa13.21□□□□□ -0.29
MMP28-204ENST00000615136 LST1O00453 97 aa13.21□□□□□ -0.29
MMP28-204ENST00000615136 Q8N3U1 123 aa13.2□□□□□ -0.3
MMP28-204ENST00000615136 TMEM262E9PQX1 116 aa13.19□□□□□ -0.3
MMP28-204ENST00000615136 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
MMP28-204ENST00000615136 A0A087WZ39 114 aa13.18□□□□□ -0.3
MMP28-204ENST00000615136 H3BT86 120 aa13.17□□□□□ -0.3
MMP28-204ENST00000615136 NTN5Q8WTR8 489 aaPredicted RBP13.17□□□□□ -0.3
MMP28-204ENST00000615136 PRB2P02812 416 aaPredicted RBP13.17□□□□□ -0.3
MMP28-204ENST00000615136 LINC00959A0A1B0GUT2 108 aa13.16□□□□□ -0.3
MMP28-204ENST00000615136 A0A1B0GUV1 79 aa13.16□□□□□ -0.3
MMP28-204ENST00000615136 CLPSL2Q6UWE3 100 aa13.16□□□□□ -0.3
MMP28-204ENST00000615136 C2orf82Q6UX34 121 aa13.14□□□□□ -0.31
MMP28-204ENST00000615136 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
MMP28-204ENST00000615136 NBEAL1Q6ZS30 2694 aa13.14□□□□□ -0.31
MMP28-204ENST00000615136 COX7A2LO14548 114 aa13.13□□□□□ -0.31
MMP28-204ENST00000615136 MIR7-3HGQ8N6C7 128 aa13.12□□□□□ -0.31
MMP28-204ENST00000615136 UBE2WQ96B02 151 aa13.12□□□□□ -0.31
MMP28-204ENST00000615136 XGP55808 180 aa13.12□□□□□ -0.31
MMP28-204ENST00000615136 TEX49A0A1B0GTD5 131 aa13.11□□□□□ -0.31
MMP28-204ENST00000615136 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
MMP28-204ENST00000615136 C5orf38Q86SI9 138 aa13.11□□□□□ -0.31
MMP28-204ENST00000615136 IBA57-AS1B1ANH7 110 aa13.1□□□□□ -0.31
MMP28-204ENST00000615136 Q6ZTC4 211 aa13.1□□□□□ -0.31
MMP28-204ENST00000615136 XCL1P47992 114 aa13.09□□□□□ -0.31
MMP28-204ENST00000615136 LINC00269Q8N2A0 174 aa13.09□□□□□ -0.31
MMP28-204ENST00000615136 TRAV13-2A0A0B4J235 113 aa13.08□□□□□ -0.31
MMP28-204ENST00000615136 A0A0J9YWU9 116 aa13.08□□□□□ -0.31
MMP28-204ENST00000615136 MT-ATP8P03928 68 aa13.08□□□□□ -0.31
MMP28-204ENST00000615136 SS18Q15532 418 aa13.08□□□□□ -0.31
MMP28-204ENST00000615136 SVIPQ8NHG7 77 aa13.08□□□□□ -0.32
MMP28-204ENST00000615136 LINC01561Q8N1V8 128 aa13.07□□□□□ -0.32
MMP28-204ENST00000615136 SND1-IT1Q9HBX3 110 aa13.07□□□□□ -0.32
MMP28-204ENST00000615136 LINC00158P58513 81 aa13.06□□□□□ -0.32
MMP28-204ENST00000615136 IGKV2-28A0A075B6P5 120 aa13.06□□□□□ -0.32
MMP28-204ENST00000615136 IGKV2D-28P01615 120 aa13.06□□□□□ -0.32
MMP28-204ENST00000615136 CRPP02741 224 aa13.06□□□□□ -0.32
MMP28-204ENST00000615136 C11orf68Q9H3H3 251 aaKnown RBP13.06□□□□□ -0.32
MMP28-204ENST00000615136 ANGP03950 147 aaKnown RBP13.05□□□□□ -0.32
MMP28-204ENST00000615136 LINC00337Q8N6G1 96 aa13.05□□□□□ -0.32
MMP28-204ENST00000615136 RPL28P46779 137 aaKnown RBP13.05□□□□□ -0.32
MMP28-204ENST00000615136 CCL18P55774 89 aa13.05□□□□□ -0.32
MMP28-204ENST00000615136 DEFB121Q5J5C9 76 aa13.05□□□□□ -0.32
MMP28-204ENST00000615136 LELP1Q5T871 98 aa13.05□□□□□ -0.32
MMP28-204ENST00000615136 Q8IZM0 81 aa13.05□□□□□ -0.32
MMP28-204ENST00000615136 IGLV10-54A0A075B6I4 117 aa13.04□□□□□ -0.32
MMP28-204ENST00000615136 TRACP01848 142 aa13.04□□□□□ -0.32
MMP28-204ENST00000615136 NANOS2P60321 138 aaKnown RBP13.04□□□□□ -0.32
MMP28-204ENST00000615136 LYPD5Q6UWN5 251 aa13.04□□□□□ -0.32
MMP28-204ENST00000615136 REG3AQ06141 175 aa13.03□□□□□ -0.32
MMP28-204ENST00000615136 KPRPQ5T749 579 aaPredicted RBP13.03□□□□□ -0.32
MMP28-204ENST00000615136 TRAV8-4A0A0B4J246 113 aa13.02□□□□□ -0.33
MMP28-204ENST00000615136 K7EIL1 84 aa13.02□□□□□ -0.33
MMP28-204ENST00000615136 C6orf226Q5I0X4 101 aa13.02□□□□□ -0.33
MMP28-204ENST00000615136 HUWE1Q7Z6Z7 4374 aaKnown RBP13.02□□□□□ -0.33
MMP28-204ENST00000615136 MDFIQ99750 246 aa13.01□□□□□ -0.33
MMP28-204ENST00000615136 MGAM2Q2M2H8 2515 aa13.01□□□□□ -0.33
MMP28-204ENST00000615136 PFN2P35080 140 aa13□□□□□ -0.33
MMP28-204ENST00000615136 CHCHD10Q8WYQ3 142 aaPredicted RBP13□□□□□ -0.33
MMP28-204ENST00000615136 FAM218AQ96MZ4 157 aa13□□□□□ -0.33
MMP28-204ENST00000615136 CD164L2Q6UWJ8 174 aa12.99□□□□□ -0.33
MMP28-204ENST00000615136 MRAPQ8TCY5 172 aa12.99□□□□□ -0.33
MMP28-204ENST00000615136 FAM240AA0A1B0GVK7 77 aa12.98□□□□□ -0.33
MMP28-204ENST00000615136 C11orf45Q8TAV5 145 aa12.98□□□□□ -0.33
MMP28-204ENST00000615136 KLK12Q9UKR0 248 aa12.97□□□□□ -0.33
MMP28-204ENST00000615136 H3BNG1 76 aa12.96□□□□□ -0.33
MMP28-204ENST00000615136 WFDC10BQ8IUB3 73 aa12.96□□□□□ -0.33
MMP28-204ENST00000615136 SMIM11BQ8TCY0 68 aa12.96□□□□□ -0.33
MMP28-204ENST00000615136 KIAA0087Q14695 138 aa12.96□□□□□ -0.34
MMP28-204ENST00000615136 DEFB131BA0A096LNP1 70 aa12.95□□□□□ -0.34
MMP28-204ENST00000615136 CXCL5P42830 114 aa12.95□□□□□ -0.34
MMP28-204ENST00000615136 ENHOQ6UWT2 76 aa12.95□□□□□ -0.34
MMP28-204ENST00000615136 A0A1B0GV72 72 aa12.94□□□□□ -0.34
MMP28-204ENST00000615136 TM2D3Q9BRN9 247 aa12.94□□□□□ -0.34
MMP28-204ENST00000615136 ESRGQ1W209 222 aa12.93□□□□□ -0.34
MMP28-204ENST00000615136 PRR34Q9NV39 138 aa12.93□□□□□ -0.34
MMP28-204ENST00000615136 CKS1BP61024 79 aa12.93□□□□□ -0.34
MMP28-204ENST00000615136 C22orf24Q9Y442 160 aa12.93□□□□□ -0.34
MMP28-204ENST00000615136 BAALC-AS2P0C853 105 aa12.92□□□□□ -0.34
MMP28-204ENST00000615136 SNCGO76070 127 aa12.91□□□□□ -0.34
MMP28-204ENST00000615136 COX17Q14061 63 aa12.91□□□□□ -0.34
MMP28-204ENST00000615136 H0YGX0 51 aa12.91□□□□□ -0.34
MMP28-204ENST00000615136 CFAP161Q6P656 301 aa12.91□□□□□ -0.34
MMP28-204ENST00000615136 MALP21145 153 aa12.89□□□□□ -0.35
MMP28-204ENST00000615136 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
MMP28-204ENST00000615136 A0A087WYN8 130 aa12.88□□□□□ -0.35
MMP28-204ENST00000615136 Q9HAA7 133 aa12.88□□□□□ -0.35
MMP28-204ENST00000615136 NDUFC2O95298 119 aa12.87□□□□□ -0.35
MMP28-204ENST00000615136 Q6Q795 121 aa12.87□□□□□ -0.35
MMP28-204ENST00000615136 LINC00526Q96FQ7 95 aa12.87□□□□□ -0.35
MMP28-204ENST00000615136 OR13C6PQ8NH95 151 aa12.86□□□□□ -0.35
MMP28-204ENST00000615136 COL7A1Q02388 2944 aa12.86□□□□□ -0.35
MMP28-204ENST00000615136 ACYP1P07311 99 aa12.86□□□□□ -0.35
MMP28-204ENST00000615136 DNAL4O96015 105 aa12.85□□□□□ -0.35
MMP28-204ENST00000615136 C6orf223Q8N319 242 aa12.85□□□□□ -0.35
MMP28-204ENST00000615136 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
MMP28-204ENST00000615136 DNHD1Q96M86 4753 aa12.85□□□□□ -0.35
MMP28-204ENST00000615136 GAGE2BQ13066 116 aa12.84□□□□□ -0.35
MMP28-204ENST00000615136 GAGE2EQ4V326 116 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms