RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TRBV6-4A0A1B0GX49 114 aa9.82□□□□□ -0.84
COL6A1-207ENST00000612273 MALP21145 153 aa9.82□□□□□ -0.84
COL6A1-207ENST00000612273 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
COL6A1-207ENST00000612273 PF4P02776 101 aa9.82□□□□□ -0.84
COL6A1-207ENST00000612273 C22orf24Q9Y442 160 aa9.82□□□□□ -0.84
COL6A1-207ENST00000612273 SDIM1Q6ZPB5 146 aa9.81□□□□□ -0.84
COL6A1-207ENST00000612273 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
COL6A1-207ENST00000612273 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
COL6A1-207ENST00000612273 TRACP01848 142 aa9.81□□□□□ -0.84
COL6A1-207ENST00000612273 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
COL6A1-207ENST00000612273 IGLV1-51P01701 117 aa9.8□□□□□ -0.84
COL6A1-207ENST00000612273 OTOGQ6ZRI0 2925 aa9.8□□□□□ -0.84
COL6A1-207ENST00000612273 CSNK1G2-AS1Q8NCQ2 148 aa9.8□□□□□ -0.84
COL6A1-207ENST00000612273 LINC00269Q8N2A0 174 aa9.79□□□□□ -0.84
COL6A1-207ENST00000612273 PDZD2O15018 2839 aa9.79□□□□□ -0.84
COL6A1-207ENST00000612273 FAM240AA0A1B0GVK7 77 aa9.78□□□□□ -0.84
COL6A1-207ENST00000612273 Q6Q795 121 aa9.78□□□□□ -0.84
COL6A1-207ENST00000612273 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
COL6A1-207ENST00000612273 DEFB135Q30KP9 77 aa9.78□□□□□ -0.84
COL6A1-207ENST00000612273 HIVEP1P15822 2718 aa9.77□□□□□ -0.84
COL6A1-207ENST00000612273 DEFB121Q5J5C9 76 aa9.77□□□□□ -0.85
COL6A1-207ENST00000612273 A0A087WVE0 104 aa9.77□□□□□ -0.85
COL6A1-207ENST00000612273 ANGP03950 147 aaKnown RBP9.77□□□□□ -0.85
COL6A1-207ENST00000612273 LINC01600Q96MT4 127 aa9.77□□□□□ -0.85
COL6A1-207ENST00000612273 A0A087WZ39 114 aa9.76□□□□□ -0.85
COL6A1-207ENST00000612273 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
COL6A1-207ENST00000612273 LRRC75A-AS1Q8N1F1 130 aa9.76□□□□□ -0.85
COL6A1-207ENST00000612273 TMEM86BQ8N661 226 aa9.76□□□□□ -0.85
COL6A1-207ENST00000612273 TRRAPQ9Y4A5 3859 aa9.76□□□□□ -0.85
COL6A1-207ENST00000612273 SS18Q15532 418 aa9.75□□□□□ -0.85
COL6A1-207ENST00000612273 FAM19A3Q7Z5A8 133 aa9.75□□□□□ -0.85
COL6A1-207ENST00000612273 LINC00643Q86TS7 51 aa9.75□□□□□ -0.85
COL6A1-207ENST00000612273 KLK5Q9Y337 293 aaPredicted RBP9.75□□□□□ -0.85
COL6A1-207ENST00000612273 INAFM2P0DMQ5 153 aa9.74□□□□□ -0.85
COL6A1-207ENST00000612273 OVOL2Q9BRP0 275 aa9.74□□□□□ -0.85
COL6A1-207ENST00000612273 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
COL6A1-207ENST00000612273 PKD1L1Q8TDX9 2849 aa9.74□□□□□ -0.85
COL6A1-207ENST00000612273 TRBV7-7A0A0K0K1E9 115 aa9.73□□□□□ -0.85
COL6A1-207ENST00000612273 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
COL6A1-207ENST00000612273 WFDC9Q8NEX5 89 aa9.73□□□□□ -0.85
COL6A1-207ENST00000612273 LINC00846Q9NV44 126 aa9.73□□□□□ -0.85
COL6A1-207ENST00000612273 ACYP1P07311 99 aa9.73□□□□□ -0.85
COL6A1-207ENST00000612273 HIST1H4AP62805 103 aaKnown RBP9.72□□□□□ -0.85
COL6A1-207ENST00000612273 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
COL6A1-207ENST00000612273 KRTAP10-3P60369 221 aa9.71□□□□□ -0.85
COL6A1-207ENST00000612273 KRTAP1-1Q07627 177 aa9.71□□□□□ -0.85
COL6A1-207ENST00000612273 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.85
COL6A1-207ENST00000612273 CFAP161Q6P656 301 aa9.71□□□□□ -0.85
COL6A1-207ENST00000612273 C6orf223Q8N319 242 aa9.71□□□□□ -0.85
COL6A1-207ENST00000612273 CXCL5P42830 114 aa9.71□□□□□ -0.86
COL6A1-207ENST00000612273 CHCHD10Q8WYQ3 142 aaPredicted RBP9.7□□□□□ -0.86
COL6A1-207ENST00000612273 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
COL6A1-207ENST00000612273 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
COL6A1-207ENST00000612273 CMC4P56277 68 aaPredicted RBP9.69□□□□□ -0.86
COL6A1-207ENST00000612273 H0YGX0 51 aa9.69□□□□□ -0.86
COL6A1-207ENST00000612273 X6R8D5 127 aa9.68□□□□□ -0.86
COL6A1-207ENST00000612273 ANK3Q12955 4377 aaKnown RBP9.68□□□□□ -0.86
COL6A1-207ENST00000612273 C6orf99Q4VX62 202 aa9.67□□□□□ -0.86
COL6A1-207ENST00000612273 ORMDL1Q9P0S3 153 aa9.67□□□□□ -0.86
COL6A1-207ENST00000612273 REG3AQ06141 175 aa9.67□□□□□ -0.86
COL6A1-207ENST00000612273 S100A7L2Q5SY68 101 aa9.67□□□□□ -0.86
COL6A1-207ENST00000612273 C10orf25Q5T742 122 aa9.67□□□□□ -0.86
COL6A1-207ENST00000612273 Q8NDZ9 215 aa9.67□□□□□ -0.86
COL6A1-207ENST00000612273 UNQ6190/PRO20217Q6UXQ8 127 aa9.66□□□□□ -0.86
COL6A1-207ENST00000612273 F8P00451 2351 aa9.66□□□□□ -0.86
COL6A1-207ENST00000612273 DAD1P61803 113 aa9.66□□□□□ -0.86
COL6A1-207ENST00000612273 NOTCH1P46531 2555 aa9.66□□□□□ -0.86
COL6A1-207ENST00000612273 KLK12Q9UKR0 248 aa9.65□□□□□ -0.86
COL6A1-207ENST00000612273 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
COL6A1-207ENST00000612273 XAGE1AQ9HD64 81 aa9.65□□□□□ -0.86
COL6A1-207ENST00000612273 NSD1Q96L73 2696 aaPredicted RBP9.65□□□□□ -0.87
COL6A1-207ENST00000612273 A0A1B0GX51 115 aa9.65□□□□□ -0.87
COL6A1-207ENST00000612273 hADV29S1A0JD25 119 aa9.64□□□□□ -0.87
COL6A1-207ENST00000612273 HILS1P60008 231 aa9.64□□□□□ -0.87
COL6A1-207ENST00000612273 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
COL6A1-207ENST00000612273 IGHV4-28A0A0C4DH34 117 aa9.63□□□□□ -0.87
COL6A1-207ENST00000612273 Q8IZM0 81 aa9.63□□□□□ -0.87
COL6A1-207ENST00000612273 NANOS2P60321 138 aaKnown RBP9.63□□□□□ -0.87
COL6A1-207ENST00000612273 IMUPQ9GZP8 106 aa9.63□□□□□ -0.87
COL6A1-207ENST00000612273 C3orf22Q8N5N4 141 aa9.62□□□□□ -0.87
COL6A1-207ENST00000612273 KIR2DL5BQ8NHK3 375 aa9.62□□□□□ -0.87
COL6A1-207ENST00000612273 MAST4O15021 2626 aa9.62□□□□□ -0.87
COL6A1-207ENST00000612273 C16orf95Q9H693 158 aa9.62□□□□□ -0.87
COL6A1-207ENST00000612273 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
COL6A1-207ENST00000612273 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
COL6A1-207ENST00000612273 CD164L2Q6UWJ8 174 aa9.61□□□□□ -0.87
COL6A1-207ENST00000612273 LAMTOR3Q9UHA4 124 aa9.61□□□□□ -0.87
COL6A1-207ENST00000612273 STAB1Q9NY15 2570 aa9.61□□□□□ -0.87
COL6A1-207ENST00000612273 SPAG11BQ08648 103 aa9.6□□□□□ -0.87
COL6A1-207ENST00000612273 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
COL6A1-207ENST00000612273 Q8N814 137 aa9.6□□□□□ -0.87
COL6A1-207ENST00000612273 TRAV23DV6A0A075B6W5 121 aa9.6□□□□□ -0.87
COL6A1-207ENST00000612273 A0A1B0GUV1 79 aa9.6□□□□□ -0.87
COL6A1-207ENST00000612273 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
COL6A1-207ENST00000612273 FAM19A1Q7Z5A9 133 aa9.59□□□□□ -0.87
COL6A1-207ENST00000612273 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
COL6A1-207ENST00000612273 INAFM1C9JVW0 142 aa9.58□□□□□ -0.88
COL6A1-207ENST00000612273 UQCRQO14949 82 aa9.58□□□□□ -0.88
COL6A1-207ENST00000612273 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
COL6A1-207ENST00000612273 CYSRT1A8MQ03 144 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms