RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 A0A0U1RQV1 116 aa9.86□□□□□ -0.83
TVP23A-210ENST00000612195 ORMDL2Q53FV1 153 aa9.86□□□□□ -0.83
TVP23A-210ENST00000612195 MRPL55Q7Z7F7 128 aaKnown RBP9.86□□□□□ -0.83
TVP23A-210ENST00000612195 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
TVP23A-210ENST00000612195 F8VRH5 84 aa9.85□□□□□ -0.83
TVP23A-210ENST00000612195 BCE1O60756 84 aa9.85□□□□□ -0.83
TVP23A-210ENST00000612195 NPSP0C0P6 89 aa9.85□□□□□ -0.83
TVP23A-210ENST00000612195 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
TVP23A-210ENST00000612195 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
TVP23A-210ENST00000612195 CRYGAP11844 174 aa9.84□□□□□ -0.83
TVP23A-210ENST00000612195 TYMSOSQ8TAI1 123 aa9.84□□□□□ -0.83
TVP23A-210ENST00000612195 FAT4Q6V0I7 4981 aa9.84□□□□□ -0.83
TVP23A-210ENST00000612195 HERVK_113P63121 156 aa9.83□□□□□ -0.84
TVP23A-210ENST00000612195 RPL37AP8A6NKH3 93 aa9.82□□□□□ -0.84
TVP23A-210ENST00000612195 SEC11AP67812 179 aa9.82□□□□□ -0.84
TVP23A-210ENST00000612195 LINC00167Q96N53 147 aa9.82□□□□□ -0.84
TVP23A-210ENST00000612195 KRTAP9-2Q9BYQ4 174 aa9.82□□□□□ -0.84
TVP23A-210ENST00000612195 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
TVP23A-210ENST00000612195 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
TVP23A-210ENST00000612195 K7EMI3 77 aa9.81□□□□□ -0.84
TVP23A-210ENST00000612195 CLLU1Q5K131 121 aa9.81□□□□□ -0.84
TVP23A-210ENST00000612195 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
TVP23A-210ENST00000612195 MUC17Q685J3 4493 aa9.8□□□□□ -0.84
TVP23A-210ENST00000612195 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
TVP23A-210ENST00000612195 CXCL5P42830 114 aa9.79□□□□□ -0.84
TVP23A-210ENST00000612195 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
TVP23A-210ENST00000612195 NXT2Q9NPJ8 142 aaKnown RBP9.79□□□□□ -0.84
TVP23A-210ENST00000612195 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.85
TVP23A-210ENST00000612195 MT-ND4LP03901 98 aa9.77□□□□□ -0.85
TVP23A-210ENST00000612195 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
TVP23A-210ENST00000612195 TOMM6Q96B49 74 aa9.77□□□□□ -0.85
TVP23A-210ENST00000612195 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.85
TVP23A-210ENST00000612195 G0S2P27469 103 aa9.76□□□□□ -0.85
TVP23A-210ENST00000612195 IFITM2Q01629 132 aa9.76□□□□□ -0.85
TVP23A-210ENST00000612195 LCE2AQ5TA79 106 aaPredicted RBP9.76□□□□□ -0.85
TVP23A-210ENST00000612195 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
TVP23A-210ENST00000612195 COX7B2Q8TF08 81 aa9.76□□□□□ -0.85
TVP23A-210ENST00000612195 RETNLBQ9BQ08 111 aa9.76□□□□□ -0.85
TVP23A-210ENST00000612195 UBE2AP49459 152 aa9.75□□□□□ -0.85
TVP23A-210ENST00000612195 RAB5BP61020 215 aa9.75□□□□□ -0.85
TVP23A-210ENST00000612195 PNRC1Q12796 327 aaPredicted RBP9.75□□□□□ -0.85
TVP23A-210ENST00000612195 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
TVP23A-210ENST00000612195 IGLV5-37A0A075B6J1 123 aa9.74□□□□□ -0.85
TVP23A-210ENST00000612195 UQCC3Q6UW78 93 aa9.74□□□□□ -0.85
TVP23A-210ENST00000612195 ERASQ7Z444 233 aa9.74□□□□□ -0.85
TVP23A-210ENST00000612195 SCGB3A1Q96QR1 104 aa9.74□□□□□ -0.85
TVP23A-210ENST00000612195 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
TVP23A-210ENST00000612195 ADCYAP1P18509 176 aa9.73□□□□□ -0.85
TVP23A-210ENST00000612195 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
TVP23A-210ENST00000612195 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
TVP23A-210ENST00000612195 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
TVP23A-210ENST00000612195 SCO1O75880 301 aa9.72□□□□□ -0.85
TVP23A-210ENST00000612195 KIAA1644Q3SXP7 199 aa9.72□□□□□ -0.85
TVP23A-210ENST00000612195 LINC00304Q8N9R0 145 aa9.72□□□□□ -0.85
TVP23A-210ENST00000612195 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
TVP23A-210ENST00000612195 IGKV2-28A0A075B6P5 120 aa9.7□□□□□ -0.86
TVP23A-210ENST00000612195 IGKV2D-28P01615 120 aa9.7□□□□□ -0.86
TVP23A-210ENST00000612195 CST9LQ9H4G1 147 aa9.7□□□□□ -0.86
TVP23A-210ENST00000612195 CDIP1Q9H305 208 aa9.69□□□□□ -0.86
TVP23A-210ENST00000612195 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
TVP23A-210ENST00000612195 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
TVP23A-210ENST00000612195 PRLHP81277 87 aa9.67□□□□□ -0.86
TVP23A-210ENST00000612195 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
TVP23A-210ENST00000612195 ATP5LO75964 103 aa9.66□□□□□ -0.86
TVP23A-210ENST00000612195 PFN2P35080 140 aa9.66□□□□□ -0.86
TVP23A-210ENST00000612195 TMEM238C9JI98 176 aa9.65□□□□□ -0.86
TVP23A-210ENST00000612195 PMVKQ15126 192 aa9.65□□□□□ -0.86
TVP23A-210ENST00000612195 FAM19A1Q7Z5A9 133 aa9.65□□□□□ -0.86
TVP23A-210ENST00000612195 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
TVP23A-210ENST00000612195 LINC01546A6NGU7 62 aa9.64□□□□□ -0.87
TVP23A-210ENST00000612195 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
TVP23A-210ENST00000612195 TMEM126AQ9H061 195 aa9.64□□□□□ -0.87
TVP23A-210ENST00000612195 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
TVP23A-210ENST00000612195 H3BRM9 83 aa9.63□□□□□ -0.87
TVP23A-210ENST00000612195 VPREB1P12018 145 aa9.63□□□□□ -0.87
TVP23A-210ENST00000612195 COMMD7Q86VX2 200 aa9.63□□□□□ -0.87
TVP23A-210ENST00000612195 SEC11CQ9BY50 192 aa9.62□□□□□ -0.87
TVP23A-210ENST00000612195 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
TVP23A-210ENST00000612195 IGLV5-39A0A0G2JS06 123 aa9.61□□□□□ -0.87
TVP23A-210ENST00000612195 M0R378 163 aa9.61□□□□□ -0.87
TVP23A-210ENST00000612195 CTAG1AP78358 180 aa9.61□□□□□ -0.87
TVP23A-210ENST00000612195 C3orf22Q8N5N4 141 aa9.61□□□□□ -0.87
TVP23A-210ENST00000612195 PLEKHB2Q96CS7 222 aa9.61□□□□□ -0.87
TVP23A-210ENST00000612195 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
TVP23A-210ENST00000612195 ERG28Q9UKR5 140 aa9.6□□□□□ -0.87
TVP23A-210ENST00000612195 TRAV9-1A0A075B6T8 112 aa9.59□□□□□ -0.87
TVP23A-210ENST00000612195 KRTAP9-6A0A140TA67 174 aa9.59□□□□□ -0.87
TVP23A-210ENST00000612195 IGLC3P0DOY3 106 aa9.59□□□□□ -0.87
TVP23A-210ENST00000612195 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
TVP23A-210ENST00000612195 CBLN2Q8IUK8 224 aa9.59□□□□□ -0.87
TVP23A-210ENST00000612195 Q8NDZ9 215 aa9.59□□□□□ -0.87
TVP23A-210ENST00000612195 FA2HQ7L5A8 372 aa9.58□□□□□ -0.88
TVP23A-210ENST00000612195 ZNF625Q96I27 306 aaPredicted RBP9.58□□□□□ -0.88
TVP23A-210ENST00000612195 GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
TVP23A-210ENST00000612195 NDUFA6P56556 154 aa9.57□□□□□ -0.88
TVP23A-210ENST00000612195 SMCO4Q9NRQ5 59 aa9.57□□□□□ -0.88
TVP23A-210ENST00000612195 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
TVP23A-210ENST00000612195 COX17Q14061 63 aa9.56□□□□□ -0.88
TVP23A-210ENST00000612195 C10orf91Q5T1B1 145 aa9.56□□□□□ -0.88
TVP23A-210ENST00000612195 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms