RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 LOC107984156A0A0G2JMH3 177 aa13.41□□□□□ -0.26
SRRM3-205ENST00000612155 ARL17AQ8IVW1 177 aa13.41□□□□□ -0.26
SRRM3-205ENST00000612155 Q8N3U1 123 aa13.41□□□□□ -0.26
SRRM3-205ENST00000612155 LINC00959A0A1B0GUT2 108 aa13.39□□□□□ -0.27
SRRM3-205ENST00000612155 TMEM262E9PQX1 116 aa13.39□□□□□ -0.27
SRRM3-205ENST00000612155 A0A0U1RRA0 63 aa13.38□□□□□ -0.27
SRRM3-205ENST00000612155 A0A1B0GUV1 79 aa13.38□□□□□ -0.27
SRRM3-205ENST00000612155 ICOSQ9Y6W8 199 aa13.38□□□□□ -0.27
SRRM3-205ENST00000612155 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.38□□□□□ -0.27
SRRM3-205ENST00000612155 NUPR2A6NF83 97 aa13.38□□□□□ -0.27
SRRM3-205ENST00000612155 H7C2G1 150 aa13.38□□□□□ -0.27
SRRM3-205ENST00000612155 PSMB2P49721 201 aa13.37□□□□□ -0.27
SRRM3-205ENST00000612155 SOSTDC1Q6X4U4 206 aa13.37□□□□□ -0.27
SRRM3-205ENST00000612155 TCL1BO95988 128 aa13.37□□□□□ -0.27
SRRM3-205ENST00000612155 C5orf38Q86SI9 138 aa13.37□□□□□ -0.27
SRRM3-205ENST00000612155 MRPL23Q16540 153 aaKnown RBP13.36□□□□□ -0.27
SRRM3-205ENST00000612155 CLPSL2Q6UWE3 100 aa13.36□□□□□ -0.27
SRRM3-205ENST00000612155 ERG28Q9UKR5 140 aa13.36□□□□□ -0.27
SRRM3-205ENST00000612155 A0A087WZ39 114 aa13.35□□□□□ -0.27
SRRM3-205ENST00000612155 LINC00308Q8TCZ7 52 aa13.35□□□□□ -0.27
SRRM3-205ENST00000612155 COX7B2Q8TF08 81 aa13.35□□□□□ -0.27
SRRM3-205ENST00000612155 F8W1H4 67 aa13.35□□□□□ -0.27
SRRM3-205ENST00000612155 SMCPP49901 116 aaPredicted RBP13.35□□□□□ -0.27
SRRM3-205ENST00000612155 APLNQ9ULZ1 77 aa13.35□□□□□ -0.27
SRRM3-205ENST00000612155 IFITM1P13164 125 aa13.34□□□□□ -0.27
SRRM3-205ENST00000612155 KLK5Q9Y337 293 aaPredicted RBP13.34□□□□□ -0.27
SRRM3-205ENST00000612155 CASC10Q5T4H9 136 aa13.34□□□□□ -0.27
SRRM3-205ENST00000612155 H3BNG1 76 aa13.33□□□□□ -0.28
SRRM3-205ENST00000612155 CIRBPQ14011 172 aaKnown RBP13.32□□□□□ -0.28
SRRM3-205ENST00000612155 ESRGQ1W209 222 aa13.32□□□□□ -0.28
SRRM3-205ENST00000612155 XCL1P47992 114 aa13.32□□□□□ -0.28
SRRM3-205ENST00000612155 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
SRRM3-205ENST00000612155 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
SRRM3-205ENST00000612155 TOMM7Q9P0U1 55 aa13.32□□□□□ -0.28
SRRM3-205ENST00000612155 MEIG1Q5JSS6 88 aa13.31□□□□□ -0.28
SRRM3-205ENST00000612155 LYPD5Q6UWN5 251 aa13.31□□□□□ -0.28
SRRM3-205ENST00000612155 LINC00269Q8N2A0 174 aa13.31□□□□□ -0.28
SRRM3-205ENST00000612155 DNAH1Q9P2D7 4330 aa13.29□□□□□ -0.28
SRRM3-205ENST00000612155 TRIAP1O43715 76 aa13.29□□□□□ -0.28
SRRM3-205ENST00000612155 SCGB1C2P0DMR2 95 aa13.29□□□□□ -0.28
SRRM3-205ENST00000612155 ETDBQ3ZM63 59 aa13.29□□□□□ -0.28
SRRM3-205ENST00000612155 SS18Q15532 418 aa13.28□□□□□ -0.28
SRRM3-205ENST00000612155 Q1RN00 199 aa13.28□□□□□ -0.28
SRRM3-205ENST00000612155 SS18L2Q9UHA2 77 aa13.28□□□□□ -0.28
SRRM3-205ENST00000612155 LYRM7Q5U5X0 104 aa13.27□□□□□ -0.28
SRRM3-205ENST00000612155 LINC00588Q9Y4M8 146 aa13.27□□□□□ -0.28
SRRM3-205ENST00000612155 TRBV20-1A0A075B6N2 111 aa13.27□□□□□ -0.29
SRRM3-205ENST00000612155 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.29
SRRM3-205ENST00000612155 C3orf84H3BNL1 204 aa13.25□□□□□ -0.29
SRRM3-205ENST00000612155 RPL13AP40429 203 aaKnown RBP13.25□□□□□ -0.29
SRRM3-205ENST00000612155 ANGP03950 147 aaKnown RBP13.25□□□□□ -0.29
SRRM3-205ENST00000612155 LELP1Q5T871 98 aa13.25□□□□□ -0.29
SRRM3-205ENST00000612155 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
SRRM3-205ENST00000612155 REG3AQ06141 175 aa13.24□□□□□ -0.29
SRRM3-205ENST00000612155 WFDC10BQ8IUB3 73 aa13.24□□□□□ -0.29
SRRM3-205ENST00000612155 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
SRRM3-205ENST00000612155 VPS13DQ5THJ4 4388 aa13.23□□□□□ -0.29
SRRM3-205ENST00000612155 CHCHD10Q8WYQ3 142 aaPredicted RBP13.23□□□□□ -0.29
SRRM3-205ENST00000612155 KMT2AQ03164 3969 aa13.23□□□□□ -0.29
SRRM3-205ENST00000612155 GAGE12HA6NDE8 117 aa13.22□□□□□ -0.29
SRRM3-205ENST00000612155 CCL18P55774 89 aa13.22□□□□□ -0.29
SRRM3-205ENST00000612155 UBE2DNLQ8IWF7 75 aa13.21□□□□□ -0.29
SRRM3-205ENST00000612155 CD164L2Q6UWJ8 174 aa13.21□□□□□ -0.3
SRRM3-205ENST00000612155 C2orf82Q6UX34 121 aa13.21□□□□□ -0.3
SRRM3-205ENST00000612155 KIAA0087Q14695 138 aa13.2□□□□□ -0.3
SRRM3-205ENST00000612155 LINC01561Q8N1V8 128 aa13.2□□□□□ -0.3
SRRM3-205ENST00000612155 PPDPFQ9H3Y8 114 aa13.2□□□□□ -0.3
SRRM3-205ENST00000612155 LINC00158P58513 81 aa13.19□□□□□ -0.3
SRRM3-205ENST00000612155 C6orf226Q5I0X4 101 aa13.19□□□□□ -0.3
SRRM3-205ENST00000612155 FOXI1Q12951 378 aa13.18□□□□□ -0.3
SRRM3-205ENST00000612155 Q8IZM0 81 aa13.18□□□□□ -0.3
SRRM3-205ENST00000612155 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
SRRM3-205ENST00000612155 PFN2P35080 140 aa13.18□□□□□ -0.3
SRRM3-205ENST00000612155 CLEC2BQ92478 149 aa13.18□□□□□ -0.3
SRRM3-205ENST00000612155 HYDINQ4G0P3 5121 aa13.17□□□□□ -0.3
SRRM3-205ENST00000612155 C9JAW5 83 aa13.17□□□□□ -0.3
SRRM3-205ENST00000612155 IGKV2-28A0A075B6P5 120 aa13.17□□□□□ -0.3
SRRM3-205ENST00000612155 J3QR89 54 aa13.17□□□□□ -0.3
SRRM3-205ENST00000612155 COX7A2LO14548 114 aa13.17□□□□□ -0.3
SRRM3-205ENST00000612155 IGKV2D-28P01615 120 aa13.17□□□□□ -0.3
SRRM3-205ENST00000612155 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
SRRM3-205ENST00000612155 LY6G6CO95867 125 aa13.16□□□□□ -0.3
SRRM3-205ENST00000612155 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
SRRM3-205ENST00000612155 PRR34Q9NV39 138 aa13.16□□□□□ -0.3
SRRM3-205ENST00000612155 KLK12Q9UKR0 248 aa13.16□□□□□ -0.3
SRRM3-205ENST00000612155 LINC01620Q4KN68 170 aa13.15□□□□□ -0.3
SRRM3-205ENST00000612155 ENHOQ6UWT2 76 aa13.15□□□□□ -0.3
SRRM3-205ENST00000612155 CARD19Q96LW7 228 aa13.15□□□□□ -0.3
SRRM3-205ENST00000612155 SMIM20Q8N5G0 67 aa13.15□□□□□ -0.3
SRRM3-205ENST00000612155 SLC25A20O43772 301 aa13.14□□□□□ -0.31
SRRM3-205ENST00000612155 LINC00337Q8N6G1 96 aa13.14□□□□□ -0.31
SRRM3-205ENST00000612155 SND1-IT1Q9HBX3 110 aa13.14□□□□□ -0.31
SRRM3-205ENST00000612155 ALMS1Q8TCU4 4167 aa13.14□□□□□ -0.31
SRRM3-205ENST00000612155 KMT2CQ8NEZ4 4911 aaKnown RBP13.13□□□□□ -0.31
SRRM3-205ENST00000612155 C5orf47Q569G3 176 aa13.13□□□□□ -0.31
SRRM3-205ENST00000612155 SACSQ9NZJ4 4579 aa13.13□□□□□ -0.31
SRRM3-205ENST00000612155 TEN1Q86WV5 123 aa13.11□□□□□ -0.31
SRRM3-205ENST00000612155 ANKRD29Q8N6D5 301 aa13.11□□□□□ -0.31
SRRM3-205ENST00000612155 LINC00476Q8WZB0 136 aa13.11□□□□□ -0.31
SRRM3-205ENST00000612155 LST1O00453 97 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms