RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 TMEM243Q9BU79 118 aa6.01□□□□□ -1.45
SMAD4-217ENST00000611848 CDC42SE2Q9NRR3 84 aa6.01□□□□□ -1.45
SMAD4-217ENST00000611848 IGLV5-39A0A0G2JS06 123 aa6□□□□□ -1.45
SMAD4-217ENST00000611848 TMEM238C9JI98 176 aa6□□□□□ -1.45
SMAD4-217ENST00000611848 SPINK8P0C7L1 97 aa6□□□□□ -1.45
SMAD4-217ENST00000611848 LINC00242Q5T6M2 205 aa6□□□□□ -1.45
SMAD4-217ENST00000611848 CDKN2A-AS1Q9UH64 79 aa6□□□□□ -1.45
SMAD4-217ENST00000611848 FRAS1Q86XX4 4008 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 CFC1BP0CG36 223 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 CFC1P0CG37 223 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 COX6A2Q02221 97 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 NDUFA12Q9UI09 145 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 TIMM17BO60830 172 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 OCIAD2Q56VL3 154 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 C1orf134Q5TEV5 83 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 WFDC10BQ8IUB3 73 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 TMEM101Q96IK0 257 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 SPANXDQ9BXN6 97 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
SMAD4-217ENST00000611848 TRBV6-8A0A0A6YYG3 113 aa5.98□□□□□ -1.45
SMAD4-217ENST00000611848 UBE2L6O14933 153 aa5.98□□□□□ -1.45
SMAD4-217ENST00000611848 NDUFA1O15239 70 aa5.98□□□□□ -1.45
SMAD4-217ENST00000611848 TSPAN13O95857 204 aa5.98□□□□□ -1.45
SMAD4-217ENST00000611848 RPL24P83731 157 aaKnown RBP5.98□□□□□ -1.45
SMAD4-217ENST00000611848 LINC00336Q6ZUF6 198 aa5.98□□□□□ -1.45
SMAD4-217ENST00000611848 MUSTN1Q8IVN3 82 aa5.98□□□□□ -1.45
SMAD4-217ENST00000611848 C6orf223Q8N319 242 aa5.98□□□□□ -1.45
SMAD4-217ENST00000611848 A0A0B4J2C4 111 aa5.97□□□□□ -1.45
SMAD4-217ENST00000611848 A4D1N5 150 aa5.97□□□□□ -1.45
SMAD4-217ENST00000611848 F8W1H4 67 aa5.97□□□□□ -1.45
SMAD4-217ENST00000611848 APOMO95445 188 aa5.97□□□□□ -1.45
SMAD4-217ENST00000611848 RBX1P62877 108 aa5.97□□□□□ -1.45
SMAD4-217ENST00000611848 LINC01556Q5JQF7 62 aa5.97□□□□□ -1.45
SMAD4-217ENST00000611848 KRTAP1-5Q9BYS1 174 aa5.97□□□□□ -1.45
SMAD4-217ENST00000611848 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.96□□□□□ -1.45
SMAD4-217ENST00000611848 TRAV13-1A0A0B4J241 112 aa5.96□□□□□ -1.45
SMAD4-217ENST00000611848 SMIM1B2RUZ4 78 aa5.96□□□□□ -1.45
SMAD4-217ENST00000611848 RTL8CO15255 209 aa5.96□□□□□ -1.45
SMAD4-217ENST00000611848 MIAQ16674 131 aa5.96□□□□□ -1.45
SMAD4-217ENST00000611848 ADAMTSL4-AS1Q5T5F5 129 aa5.96□□□□□ -1.45
SMAD4-217ENST00000611848 PRO1854Q9UHT4 67 aa5.96□□□□□ -1.45
SMAD4-217ENST00000611848 FAT2Q9NYQ8 4349 aa5.96□□□□□ -1.46
SMAD4-217ENST00000611848 H3BMG7 143 aa5.95□□□□□ -1.46
SMAD4-217ENST00000611848 K7ERU9 68 aa5.95□□□□□ -1.46
SMAD4-217ENST00000611848 IGHV3-33P01772 117 aa5.95□□□□□ -1.46
SMAD4-217ENST00000611848 IFITM1P13164 125 aa5.95□□□□□ -1.46
SMAD4-217ENST00000611848 GAGE6Q13070 117 aa5.95□□□□□ -1.46
SMAD4-217ENST00000611848 PRO0461Q9UI25 63 aa5.95□□□□□ -1.46
SMAD4-217ENST00000611848 IGLV4-60A0A075B6I1 120 aa5.94□□□□□ -1.46
SMAD4-217ENST00000611848 IBA57-AS1B1ANH7 110 aa5.94□□□□□ -1.46
SMAD4-217ENST00000611848 LYRM7Q5U5X0 104 aa5.94□□□□□ -1.46
SMAD4-217ENST00000611848 ZNF625Q96I27 306 aaPredicted RBP5.94□□□□□ -1.46
SMAD4-217ENST00000611848 CHCHD5Q9BSY4 110 aa5.94□□□□□ -1.46
SMAD4-217ENST00000611848 TRBV20-1A0A075B6N2 111 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 A0A1B0GUV1 79 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 TMEM262E9PQX1 116 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 PRSS2P07478 247 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 HERV-K104P63124 156 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 CIRBPQ14011 172 aaKnown RBP5.92□□□□□ -1.46
SMAD4-217ENST00000611848 WFDC2Q14508 124 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 PPDPFQ9H3Y8 114 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 CBY1Q9Y3M2 126 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
SMAD4-217ENST00000611848 TCL1BO95988 128 aa5.91□□□□□ -1.46
SMAD4-217ENST00000611848 PSMB2P49721 201 aa5.91□□□□□ -1.46
SMAD4-217ENST00000611848 Q6ZRN7 208 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-217ENST00000611848 Q8N3U1 123 aa5.91□□□□□ -1.46
SMAD4-217ENST00000611848 EPPK1P58107 5090 aaKnown RBP5.91□□□□□ -1.46
SMAD4-217ENST00000611848 A0A087WZ39 114 aa5.9□□□□□ -1.46
SMAD4-217ENST00000611848 TRBV30A0A0K0K1B3 111 aa5.9□□□□□ -1.46
SMAD4-217ENST00000611848 LINC00959A0A1B0GUT2 108 aa5.9□□□□□ -1.46
SMAD4-217ENST00000611848 SFTA2Q6UW10 78 aa5.9□□□□□ -1.46
SMAD4-217ENST00000611848 LINC00308Q8TCZ7 52 aa5.9□□□□□ -1.46
SMAD4-217ENST00000611848 KLK12Q9UKR0 248 aa5.9□□□□□ -1.46
SMAD4-217ENST00000611848 DNAH11Q96DT5 4516 aa5.9□□□□□ -1.47
SMAD4-217ENST00000611848 PKD1P98161 4303 aa5.9□□□□□ -1.47
SMAD4-217ENST00000611848 A0A1B0GVY2 172 aa5.89□□□□□ -1.47
SMAD4-217ENST00000611848 SCGB1C2P0DMR2 95 aa5.89□□□□□ -1.47
SMAD4-217ENST00000611848 RNF151Q2KHN1 245 aa5.89□□□□□ -1.47
SMAD4-217ENST00000611848 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
SMAD4-217ENST00000611848 COPS9Q8WXC6 57 aa5.89□□□□□ -1.47
SMAD4-217ENST00000611848 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
SMAD4-217ENST00000611848 LINC01561Q8N1V8 128 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 DAND5Q8N907 189 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 RMI2Q96E14 147 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 Q9HAA7 133 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 CRPP02741 224 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 ANGP03950 147 aaKnown RBP5.88□□□□□ -1.47
SMAD4-217ENST00000611848 NPC2P61916 151 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 ETDBQ3ZM63 59 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 SOSTDC1Q6X4U4 206 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 UBE2WQ96B02 151 aa5.88□□□□□ -1.47
SMAD4-217ENST00000611848 IGKV3OR2-268A0A0C4DH90 116 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 H7C2G1 150 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 M0QXV9 152 aa5.87□□□□□ -1.47
SMAD4-217ENST00000611848 PSCAO43653 123 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms