RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	VPREB1	P12018	145 aa		12.02	□□□□□ -0.49
CDK11B-205	ENST00000611150	CCL18	P55774	89 aa		12.01	□□□□□ -0.49
CDK11B-205	ENST00000611150	NTM-AS1	Q6ZSK4	140 aa		12.01	□□□□□ -0.49
CDK11B-205	ENST00000611150	LINC00158	P58513	81 aa		12.01	□□□□□ -0.49
CDK11B-205	ENST00000611150	PRRC2C	Q9Y520	2896 aa	Known RBP	12.01	□□□□□ -0.49
CDK11B-205	ENST00000611150	IGHV3OR16-12	A0A075B7B8	117 aa		12	□□□□□ -0.49
CDK11B-205	ENST00000611150	C22orf34	Q6ZV56	151 aa		12	□□□□□ -0.49
CDK11B-205	ENST00000611150	TRBV6-8	A0A0A6YYG3	113 aa		12	□□□□□ -0.49
CDK11B-205	ENST00000611150	SCX	Q7RTU7	201 aa		11.99	□□□□□ -0.49
CDK11B-205	ENST00000611150	C9orf106	Q8NAJ2	232 aa		11.99	□□□□□ -0.49
CDK11B-205	ENST00000611150	FLNC	Q14315	2725 aa		11.99	□□□□□ -0.49
CDK11B-205	ENST00000611150	RELN	P78509	3460 aa		11.98	□□□□□ -0.49
CDK11B-205	ENST00000611150	ASH1L	Q9NR48	2969 aa	Known RBP	11.98	□□□□□ -0.49
CDK11B-205	ENST00000611150	WNK2	Q9Y3S1	2297 aa		11.98	□□□□□ -0.49
CDK11B-205	ENST00000611150	TRBV6-4	A0A1B0GX49	114 aa		11.98	□□□□□ -0.49
CDK11B-205	ENST00000611150		M0R2N4	97 aa		11.98	□□□□□ -0.49
CDK11B-205	ENST00000611150	KAAG1	Q9UBP8	84 aa		11.98	□□□□□ -0.49
CDK11B-205	ENST00000611150	SPATA3	Q8NHX4	192 aa		11.97	□□□□□ -0.49
CDK11B-205	ENST00000611150	CCL17	Q92583	94 aa		11.97	□□□□□ -0.49
CDK11B-205	ENST00000611150	FLNB	O75369	2602 aa	Known RBP	11.97	□□□□□ -0.49
CDK11B-205	ENST00000611150	NKAPP1	Q8N9T2	125 aa		11.96	□□□□□ -0.49
CDK11B-205	ENST00000611150	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.96	□□□□□ -0.5
CDK11B-205	ENST00000611150	C9orf66	Q5T8R8	295 aa		11.96	□□□□□ -0.5
CDK11B-205	ENST00000611150	CYP4F30P	Q9H0H9	118 aa		11.94	□□□□□ -0.5
CDK11B-205	ENST00000611150	SETX	Q7Z333	2677 aa	Known RBP	11.94	□□□□□ -0.5
CDK11B-205	ENST00000611150	COL12A1	Q99715	3063 aa		11.94	□□□□□ -0.5
CDK11B-205	ENST00000611150	ICE1	Q9Y2F5	2266 aa		11.94	□□□□□ -0.5
CDK11B-205	ENST00000611150	LIMD2	Q9BT23	127 aa		11.94	□□□□□ -0.5
CDK11B-205	ENST00000611150	COX7B2	Q8TF08	81 aa		11.93	□□□□□ -0.5
CDK11B-205	ENST00000611150	DPM3	Q9P2X0	92 aa		11.93	□□□□□ -0.5
CDK11B-205	ENST00000611150	IGHV3-73	A0A0B4J1V6	119 aa		11.92	□□□□□ -0.5
CDK11B-205	ENST00000611150	ESM1	Q9NQ30	184 aa		11.92	□□□□□ -0.5
CDK11B-205	ENST00000611150	LRRK2	Q5S007	2527 aa		11.91	□□□□□ -0.5
CDK11B-205	ENST00000611150	DOPEY2	Q9Y3R5	2298 aa		11.9	□□□□□ -0.5
CDK11B-205	ENST00000611150	HECTD1	Q9ULT8	2610 aa		11.89	□□□□□ -0.51
CDK11B-205	ENST00000611150	PTPN13	Q12923	2485 aa		11.89	□□□□□ -0.51
CDK11B-205	ENST00000611150		A0A096LNT2	108 aa		11.89	□□□□□ -0.51
CDK11B-205	ENST00000611150	IGHV7-81	A0A0B4J1V7	117 aa		11.89	□□□□□ -0.51
CDK11B-205	ENST00000611150	KLK9	Q2XQG4	91 aa		11.89	□□□□□ -0.51
CDK11B-205	ENST00000611150	USP9X	Q93008	2570 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK11B-205	ENST00000611150	PROK1	P58294	105 aa		11.88	□□□□□ -0.51
CDK11B-205	ENST00000611150	ABCA4	P78363	2273 aa		11.88	□□□□□ -0.51
CDK11B-205	ENST00000611150		K7EQD1	137 aa		11.87	□□□□□ -0.51
CDK11B-205	ENST00000611150	LY6H	O94772	140 aa		11.87	□□□□□ -0.51
CDK11B-205	ENST00000611150	IGKV4-1	P06312	121 aa		11.86	□□□□□ -0.51
CDK11B-205	ENST00000611150	HIVEP3	Q5T1R4	2406 aa		11.86	□□□□□ -0.51
CDK11B-205	ENST00000611150	MUC7	Q8TAX7	377 aa		11.86	□□□□□ -0.51
CDK11B-205	ENST00000611150		A6NED7	52 aa		11.85	□□□□□ -0.51
CDK11B-205	ENST00000611150	LCE6A	A0A183	80 aa		11.85	□□□□□ -0.51
CDK11B-205	ENST00000611150		H3BQ85	93 aa		11.85	□□□□□ -0.51
CDK11B-205	ENST00000611150	TOMM7	Q9P0U1	55 aa		11.85	□□□□□ -0.51
CDK11B-205	ENST00000611150	USP9Y	O00507	2555 aa	Predicted RBP	11.84	□□□□□ -0.51
CDK11B-205	ENST00000611150	SORL1	Q92673	2214 aa		11.84	□□□□□ -0.51
CDK11B-205	ENST00000611150	MINOS1	Q5TGZ0	78 aa		11.84	□□□□□ -0.51
CDK11B-205	ENST00000611150	MDFI	Q99750	246 aa		11.84	□□□□□ -0.51
CDK11B-205	ENST00000611150	PRR15L	Q9BU68	103 aa		11.84	□□□□□ -0.51
CDK11B-205	ENST00000611150	IGKV3-7	A0A075B6H7	116 aa		11.83	□□□□□ -0.52
CDK11B-205	ENST00000611150	UTP20	O75691	2785 aa	Known RBP	11.83	□□□□□ -0.52
CDK11B-205	ENST00000611150	CDC42SE1	Q9NRR8	79 aa		11.83	□□□□□ -0.52
CDK11B-205	ENST00000611150		Q75L30	129 aa		11.82	□□□□□ -0.52
CDK11B-205	ENST00000611150	LINC01006	Q8NI28	216 aa		11.82	□□□□□ -0.52
CDK11B-205	ENST00000611150	SPTAN1	Q13813	2472 aa	Known RBP	11.82	□□□□□ -0.52
CDK11B-205	ENST00000611150	ODF3B	A8MYP8	253 aa		11.82	□□□□□ -0.52
CDK11B-205	ENST00000611150	NANOS2	P60321	138 aa	Known RBP	11.82	□□□□□ -0.52
CDK11B-205	ENST00000611150		Q8N9L7	120 aa		11.82	□□□□□ -0.52
CDK11B-205	ENST00000611150	LINC00575	Q6W349	94 aa		11.81	□□□□□ -0.52
CDK11B-205	ENST00000611150		Q8N9P0	234 aa	Predicted RBP	11.81	□□□□□ -0.52
CDK11B-205	ENST00000611150	SPTBN1	Q01082	2364 aa	Known RBP	11.81	□□□□□ -0.52
CDK11B-205	ENST00000611150	ZCCHC13	Q8WW36	166 aa	Known RBP	11.81	□□□□□ -0.52
CDK11B-205	ENST00000611150	IGHV4-31	P0DP07	118 aa		11.8	□□□□□ -0.52
CDK11B-205	ENST00000611150	FAM30A	Q9NZY2	134 aa		11.79	□□□□□ -0.52
CDK11B-205	ENST00000611150	ATP6V0E1	O15342	81 aa		11.78	□□□□□ -0.52
CDK11B-205	ENST00000611150		Q8N9W7	124 aa		11.78	□□□□□ -0.52
CDK11B-205	ENST00000611150	DOPEY1	Q5JWR5	2465 aa		11.78	□□□□□ -0.52
CDK11B-205	ENST00000611150	LINC01554	Q52M75	96 aa		11.77	□□□□□ -0.52
CDK11B-205	ENST00000611150	NDUFA4	O00483	81 aa		11.77	□□□□□ -0.53
CDK11B-205	ENST00000611150	NDUFB1	O75438	58 aa		11.77	□□□□□ -0.53
CDK11B-205	ENST00000611150		Q6ZSN1	163 aa		11.77	□□□□□ -0.53
CDK11B-205	ENST00000611150	CYSRT1	A8MQ03	144 aa		11.76	□□□□□ -0.53
CDK11B-205	ENST00000611150	PRR4	Q16378	134 aa		11.76	□□□□□ -0.53
CDK11B-205	ENST00000611150	CDC42SE2	Q9NRR3	84 aa		11.76	□□□□□ -0.53
CDK11B-205	ENST00000611150	C6orf99	Q4VX62	202 aa		11.76	□□□□□ -0.53
CDK11B-205	ENST00000611150	IGLV4-60	A0A075B6I1	120 aa		11.74	□□□□□ -0.53
CDK11B-205	ENST00000611150	IGHV4-38-2	P0DP08	117 aa		11.74	□□□□□ -0.53
CDK11B-205	ENST00000611150	IGHV3-53	P01767	116 aa		11.74	□□□□□ -0.53
CDK11B-205	ENST00000611150	PRB2	P02812	416 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK11B-205	ENST00000611150	C9orf116	Q5BN46	136 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK11B-205	ENST00000611150	SERTAD4-AS1	Q5TG53	156 aa		11.74	□□□□□ -0.53
CDK11B-205	ENST00000611150	LOC100131303	A0A0U1RQF7	123 aa		11.73	□□□□□ -0.53
CDK11B-205	ENST00000611150		G3V318	75 aa		11.73	□□□□□ -0.53
CDK11B-205	ENST00000611150	C19orf84	I3L1E1	186 aa		11.73	□□□□□ -0.53
CDK11B-205	ENST00000611150	MOBP	Q13875	183 aa		11.73	□□□□□ -0.53
CDK11B-205	ENST00000611150	CELA1	Q9UNI1	258 aa		11.73	□□□□□ -0.53
CDK11B-205	ENST00000611150	NBPF19	A0A087WUL8	3843 aa		11.73	□□□□□ -0.53
CDK11B-205	ENST00000611150	IGKV3-20	P01619	116 aa		11.72	□□□□□ -0.53
CDK11B-205	ENST00000611150	ELOF1	P60002	83 aa	Known RBP	11.72	□□□□□ -0.53
CDK11B-205	ENST00000611150	MAST4	O15021	2626 aa		11.72	□□□□□ -0.53
CDK11B-205	ENST00000611150	SMIM29	Q86T20	159 aa		11.71	□□□□□ -0.53
CDK11B-205	ENST00000611150	RHPN1-AS1	Q9BWJ2	59 aa		11.71	□□□□□ -0.53
CDK11B-205	ENST00000611150	CCL24	O00175	119 aa		11.71	□□□□□ -0.54

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