RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GYPEP15421 78 aa14.28□□□□□ -0.12
SSBP3-216ENST00000610401 HIST1H4AP62805 103 aaKnown RBP14.28□□□□□ -0.12
SSBP3-216ENST00000610401 LOC107984640A0A0U1RRK4 108 aa14.28□□□□□ -0.12
SSBP3-216ENST00000610401 LINC00846Q9NV44 126 aa14.27□□□□□ -0.12
SSBP3-216ENST00000610401 CSDC2Q9Y534 153 aaKnown RBP14.27□□□□□ -0.12
SSBP3-216ENST00000610401 UNC79Q9P2D8 2635 aa14.27□□□□□ -0.13
SSBP3-216ENST00000610401 LINC01600Q96MT4 127 aa14.27□□□□□ -0.13
SSBP3-216ENST00000610401 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.13
SSBP3-216ENST00000610401 TENM1Q9UKZ4 2725 aa14.26□□□□□ -0.13
SSBP3-216ENST00000610401 IGHV3OR16-9A0A0B4J2B5 98 aa14.26□□□□□ -0.13
SSBP3-216ENST00000610401 RPL28P46779 137 aaKnown RBP14.26□□□□□ -0.13
SSBP3-216ENST00000610401 IL17DQ8TAD2 202 aa14.26□□□□□ -0.13
SSBP3-216ENST00000610401 FHL2Q14192 279 aa14.25□□□□□ -0.13
SSBP3-216ENST00000610401 TRRAPQ9Y4A5 3859 aa14.25□□□□□ -0.13
SSBP3-216ENST00000610401 ACYP1P07311 99 aa14.24□□□□□ -0.13
SSBP3-216ENST00000610401 C16orf74Q96GX8 76 aa14.24□□□□□ -0.13
SSBP3-216ENST00000610401 PPDPFQ9H3Y8 114 aa14.24□□□□□ -0.13
SSBP3-216ENST00000610401 PDZD2O15018 2839 aa14.24□□□□□ -0.13
SSBP3-216ENST00000610401 INAFM2P0DMQ5 153 aa14.24□□□□□ -0.13
SSBP3-216ENST00000610401 CXCL5P42830 114 aa14.24□□□□□ -0.13
SSBP3-216ENST00000610401 LINC00959A0A1B0GUT2 108 aa14.23□□□□□ -0.13
SSBP3-216ENST00000610401 HTN3P15516 51 aa14.23□□□□□ -0.13
SSBP3-216ENST00000610401 hADV29S1A0JD25 119 aa14.23□□□□□ -0.13
SSBP3-216ENST00000610401 LRRC75A-AS1Q8N1F1 130 aa14.23□□□□□ -0.13
SSBP3-216ENST00000610401 LINC00482Q8N8I6 264 aa14.23□□□□□ -0.13
SSBP3-216ENST00000610401 LINC01006Q8NI28 216 aa14.23□□□□□ -0.13
SSBP3-216ENST00000610401 CYSTM1Q9H1C7 97 aa14.21□□□□□ -0.13
SSBP3-216ENST00000610401 A0A1B0GX51 115 aa14.2□□□□□ -0.14
SSBP3-216ENST00000610401 LINC00269Q8N2A0 174 aa14.2□□□□□ -0.14
SSBP3-216ENST00000610401 HIVEP1P15822 2718 aa14.2□□□□□ -0.14
SSBP3-216ENST00000610401 PKD1L1Q8TDX9 2849 aa14.19□□□□□ -0.14
SSBP3-216ENST00000610401 TRBV6-4A0A1B0GX49 114 aa14.19□□□□□ -0.14
SSBP3-216ENST00000610401 HILS1P60008 231 aa14.19□□□□□ -0.14
SSBP3-216ENST00000610401 C3orf22Q8N5N4 141 aa14.19□□□□□ -0.14
SSBP3-216ENST00000610401 SMR3AQ99954 134 aa14.18□□□□□ -0.14
SSBP3-216ENST00000610401 A0A087WZ39 114 aa14.17□□□□□ -0.14
SSBP3-216ENST00000610401 CFAP161Q6P656 301 aa14.17□□□□□ -0.14
SSBP3-216ENST00000610401 ANGP03950 147 aaKnown RBP14.17□□□□□ -0.14
SSBP3-216ENST00000610401 TRAV25A0A0B4J276 109 aa14.16□□□□□ -0.14
SSBP3-216ENST00000610401 IBA57-AS1B1ANH7 110 aa14.14□□□□□ -0.15
SSBP3-216ENST00000610401 FAM19A3Q7Z5A8 133 aa14.14□□□□□ -0.15
SSBP3-216ENST00000610401 SS18Q15532 418 aa14.14□□□□□ -0.15
SSBP3-216ENST00000610401 CSNK1G2-AS1Q8NCQ2 148 aa14.14□□□□□ -0.15
SSBP3-216ENST00000610401 TMEM86BQ8N661 226 aa14.14□□□□□ -0.15
SSBP3-216ENST00000610401 SPATA3Q8NHX4 192 aa14.14□□□□□ -0.15
SSBP3-216ENST00000610401 PF4P02776 101 aa14.13□□□□□ -0.15
SSBP3-216ENST00000610401 C6orf223Q8N319 242 aa14.13□□□□□ -0.15
SSBP3-216ENST00000610401 C19orf73Q9NVV2 129 aa14.13□□□□□ -0.15
SSBP3-216ENST00000610401 KRTAP1-3Q8IUG1 177 aa14.13□□□□□ -0.15
SSBP3-216ENST00000610401 ORMDL1Q9P0S3 153 aa14.13□□□□□ -0.15
SSBP3-216ENST00000610401 ZNF843Q8N446 348 aa14.12□□□□□ -0.15
SSBP3-216ENST00000610401 DEFB135Q30KP9 77 aa14.12□□□□□ -0.15
SSBP3-216ENST00000610401 IMUPQ9GZP8 106 aa14.12□□□□□ -0.15
SSBP3-216ENST00000610401 TRAV23DV6A0A075B6W5 121 aa14.11□□□□□ -0.15
SSBP3-216ENST00000610401 H0YGX0 51 aa14.11□□□□□ -0.15
SSBP3-216ENST00000610401 UQCRQO14949 82 aa14.11□□□□□ -0.15
SSBP3-216ENST00000610401 OTOGQ6ZRI0 2925 aa14.11□□□□□ -0.15
SSBP3-216ENST00000610401 FAM222AQ5U5X8 452 aa14.11□□□□□ -0.15
SSBP3-216ENST00000610401 IGLV1-51P01701 117 aa14.1□□□□□ -0.15
SSBP3-216ENST00000610401 C6orf99Q4VX62 202 aa14.1□□□□□ -0.15
SSBP3-216ENST00000610401 FAM110AQ9BQ89 295 aa14.1□□□□□ -0.15
SSBP3-216ENST00000610401 Q8NDZ9 215 aa14.09□□□□□ -0.15
SSBP3-216ENST00000610401 FAM19A1Q7Z5A9 133 aa14.08□□□□□ -0.15
SSBP3-216ENST00000610401 S100A7L2Q5SY68 101 aa14.08□□□□□ -0.16
SSBP3-216ENST00000610401 KIR2DL5BQ8NHK3 375 aa14.08□□□□□ -0.16
SSBP3-216ENST00000610401 COX7CP15954 63 aa14.08□□□□□ -0.16
SSBP3-216ENST00000610401 F8P00451 2351 aa14.06□□□□□ -0.16
SSBP3-216ENST00000610401 ENHOQ6UWT2 76 aa14.06□□□□□ -0.16
SSBP3-216ENST00000610401 LINC01561Q8N1V8 128 aa14.06□□□□□ -0.16
SSBP3-216ENST00000610401 CHCHD10Q8WYQ3 142 aaPredicted RBP14.06□□□□□ -0.16
SSBP3-216ENST00000610401 C10orf25Q5T742 122 aa14.06□□□□□ -0.16
SSBP3-216ENST00000610401 OVOL2Q9BRP0 275 aa14.05□□□□□ -0.16
SSBP3-216ENST00000610401 TMEM126AQ9H061 195 aa14.05□□□□□ -0.16
SSBP3-216ENST00000610401 UNQ6190/PRO20217Q6UXQ8 127 aa14.04□□□□□ -0.16
SSBP3-216ENST00000610401 USP17L23D6RBM5 183 aa14.04□□□□□ -0.16
SSBP3-216ENST00000610401 LAMTOR3Q9UHA4 124 aa14.04□□□□□ -0.16
SSBP3-216ENST00000610401 XAGE1AQ9HD64 81 aa14.04□□□□□ -0.16
SSBP3-216ENST00000610401 NANOS2P60321 138 aaKnown RBP14.03□□□□□ -0.16
SSBP3-216ENST00000610401 RPL18AQ02543 176 aaKnown RBP14.03□□□□□ -0.16
SSBP3-216ENST00000610401 DSCR8Q96T75 97 aa14.03□□□□□ -0.16
SSBP3-216ENST00000610401 C2orf48Q96LS8 159 aa14.03□□□□□ -0.16
SSBP3-216ENST00000610401 ANK3Q12955 4377 aaKnown RBP14.02□□□□□ -0.17
SSBP3-216ENST00000610401 Q8N814 137 aa14.02□□□□□ -0.17
SSBP3-216ENST00000610401 M0R2N4 97 aa14.01□□□□□ -0.17
SSBP3-216ENST00000610401 ATOX1O00244 68 aa14.01□□□□□ -0.17
SSBP3-216ENST00000610401 REG3AQ06141 175 aa14.01□□□□□ -0.17
SSBP3-216ENST00000610401 PRO0255Q9UI72 69 aa14□□□□□ -0.17
SSBP3-216ENST00000610401 HAMPP81172 84 aa13.99□□□□□ -0.17
SSBP3-216ENST00000610401 KLK12Q9UKR0 248 aa13.99□□□□□ -0.17
SSBP3-216ENST00000610401 SCXQ7RTU7 201 aa13.98□□□□□ -0.17
SSBP3-216ENST00000610401 Q8IZM0 81 aa13.97□□□□□ -0.17
SSBP3-216ENST00000610401 KRTAP10-3P60369 221 aa13.96□□□□□ -0.17
SSBP3-216ENST00000610401 CCKP06307 115 aa13.96□□□□□ -0.17
SSBP3-216ENST00000610401 X6R8D5 127 aa13.96□□□□□ -0.17
SSBP3-216ENST00000610401 CELA1Q9UNI1 258 aa13.95□□□□□ -0.18
SSBP3-216ENST00000610401 GHRHP01286 108 aa13.95□□□□□ -0.18
SSBP3-216ENST00000610401 DAD1P61803 113 aa13.94□□□□□ -0.18
SSBP3-216ENST00000610401 KIAA0087Q14695 138 aa13.94□□□□□ -0.18
SSBP3-216ENST00000610401 Q6JHZ5 121 aa13.94□□□□□ -0.18
SSBP3-216ENST00000610401 BAHCC1Q9P281 2608 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms