RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 LINC01546A6NGU7 62 aa8.45□□□□□ -1.06
CTSA-218ENST00000607814 RAB5BP61020 215 aa8.45□□□□□ -1.06
CTSA-218ENST00000607814 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
CTSA-218ENST00000607814 PRR3P79522 188 aaKnown RBP8.44□□□□□ -1.06
CTSA-218ENST00000607814 RNF151Q2KHN1 245 aa8.44□□□□□ -1.06
CTSA-218ENST00000607814 C18orf32Q8TCD1 76 aa8.44□□□□□ -1.06
CTSA-218ENST00000607814 GEMIN7Q9H840 131 aaKnown RBP8.44□□□□□ -1.06
CTSA-218ENST00000607814 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
CTSA-218ENST00000607814 A0A096LNJ9 63 aa8.43□□□□□ -1.06
CTSA-218ENST00000607814 NPSP0C0P6 89 aa8.43□□□□□ -1.06
CTSA-218ENST00000607814 G0S2P27469 103 aa8.43□□□□□ -1.06
CTSA-218ENST00000607814 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
CTSA-218ENST00000607814 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
CTSA-218ENST00000607814 PRSS2P07478 247 aa8.42□□□□□ -1.06
CTSA-218ENST00000607814 NDUFA6P56556 154 aa8.42□□□□□ -1.06
CTSA-218ENST00000607814 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CTSA-218ENST00000607814 HERVK_113P63121 156 aa8.42□□□□□ -1.06
CTSA-218ENST00000607814 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
CTSA-218ENST00000607814 LINC00469Q8N7U9 141 aa8.42□□□□□ -1.06
CTSA-218ENST00000607814 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
CTSA-218ENST00000607814 LINC00614P0C842 121 aa8.41□□□□□ -1.06
CTSA-218ENST00000607814 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
CTSA-218ENST00000607814 LINC01561Q8N1V8 128 aa8.41□□□□□ -1.06
CTSA-218ENST00000607814 PACRGQ96M98 296 aaPredicted RBP8.41□□□□□ -1.06
CTSA-218ENST00000607814 F8WDY8 70 aa8.4□□□□□ -1.06
CTSA-218ENST00000607814 SPINK8P0C7L1 97 aa8.4□□□□□ -1.06
CTSA-218ENST00000607814 CKS1BP61024 79 aa8.4□□□□□ -1.06
CTSA-218ENST00000607814 KRTAP11-1Q8IUC1 163 aa8.4□□□□□ -1.06
CTSA-218ENST00000607814 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
CTSA-218ENST00000607814 HIST1H2BKO60814 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BJP06899 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BOP23527 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BBP33778 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BDP58876 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BCP62807 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 SEC11AP67812 179 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 PMVKQ15126 192 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST2H2BEQ16778 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.39□□□□□ -1.07
CTSA-218ENST00000607814 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
CTSA-218ENST00000607814 REG3GQ6UW15 175 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BHQ93079 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BNQ99877 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 HIST1H2BMQ99879 126 aa8.39□□□□□ -1.07
CTSA-218ENST00000607814 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
CTSA-218ENST00000607814 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
CTSA-218ENST00000607814 SMIM1B2RUZ4 78 aa8.38□□□□□ -1.07
CTSA-218ENST00000607814 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
CTSA-218ENST00000607814 Q8IZM0 81 aa8.38□□□□□ -1.07
CTSA-218ENST00000607814 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
CTSA-218ENST00000607814 MUC2Q02817 5179 aa8.38□□□□□ -1.07
CTSA-218ENST00000607814 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
CTSA-218ENST00000607814 S100A6P06703 90 aa8.37□□□□□ -1.07
CTSA-218ENST00000607814 ODF1Q14990 250 aa8.37□□□□□ -1.07
CTSA-218ENST00000607814 SPINK6Q6UWN8 80 aa8.37□□□□□ -1.07
CTSA-218ENST00000607814 HBDP02042 147 aa8.36□□□□□ -1.07
CTSA-218ENST00000607814 COA6Q5JTJ3 125 aaKnown RBP8.36□□□□□ -1.07
CTSA-218ENST00000607814 COX7B2Q8TF08 81 aa8.36□□□□□ -1.07
CTSA-218ENST00000607814 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
CTSA-218ENST00000607814 IGLV5-45A0A087WSX0 123 aa8.35□□□□□ -1.07
CTSA-218ENST00000607814 SRSF9Q13242 221 aaKnown RBP eCLIP8.35□□□□□ -1.07
CTSA-218ENST00000607814 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
CTSA-218ENST00000607814 C1orf137Q5JT78 98 aa8.35□□□□□ -1.07
CTSA-218ENST00000607814 TMA7Q9Y2S6 64 aaKnown RBP8.35□□□□□ -1.07
CTSA-218ENST00000607814 LPAP08519 4548 aa8.35□□□□□ -1.07
CTSA-218ENST00000607814 LINC01549A6NIU2 74 aa8.34□□□□□ -1.07
CTSA-218ENST00000607814 BAGE3Q86Y29 109 aa8.34□□□□□ -1.07
CTSA-218ENST00000607814 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
CTSA-218ENST00000607814 F8VRH5 84 aa8.33□□□□□ -1.08
CTSA-218ENST00000607814 M0QXV9 152 aa8.33□□□□□ -1.08
CTSA-218ENST00000607814 IGLC3P0DOY3 106 aa8.32□□□□□ -1.08
CTSA-218ENST00000607814 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
CTSA-218ENST00000607814 UBE2BP63146 152 aa8.32□□□□□ -1.08
CTSA-218ENST00000607814 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
CTSA-218ENST00000607814 CHCHD1Q96BP2 118 aaKnown RBP8.32□□□□□ -1.08
CTSA-218ENST00000607814 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
CTSA-218ENST00000607814 C5orf52A6NGY3 159 aa8.3□□□□□ -1.08
CTSA-218ENST00000607814 H3BRM9 83 aa8.3□□□□□ -1.08
CTSA-218ENST00000607814 ATP5LO75964 103 aa8.3□□□□□ -1.08
CTSA-218ENST00000607814 SERF1AO75920 110 aa8.29□□□□□ -1.08
CTSA-218ENST00000607814 TMEM170BQ5T4T1 132 aa8.29□□□□□ -1.08
CTSA-218ENST00000607814 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
CTSA-218ENST00000607814 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
CTSA-218ENST00000607814 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
CTSA-218ENST00000607814 HSBP1O75506 76 aa8.28□□□□□ -1.08
CTSA-218ENST00000607814 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
CTSA-218ENST00000607814 PFN2P35080 140 aa8.28□□□□□ -1.08
CTSA-218ENST00000607814 CXCL5P42830 114 aa8.28□□□□□ -1.08
CTSA-218ENST00000607814 SNRPEP62304 92 aaKnown RBP8.28□□□□□ -1.08
CTSA-218ENST00000607814 CHTOPQ9Y3Y2 248 aaKnown RBP8.28□□□□□ -1.08
CTSA-218ENST00000607814 IGLV5-39A0A0G2JS06 123 aa8.27□□□□□ -1.09
CTSA-218ENST00000607814 A0A0U1RQV1 116 aa8.27□□□□□ -1.09
CTSA-218ENST00000607814 H0Y8G0 127 aa8.27□□□□□ -1.09
CTSA-218ENST00000607814 NUPR1O60356 82 aa8.27□□□□□ -1.09
CTSA-218ENST00000607814 S100A2P29034 98 aa8.27□□□□□ -1.09
CTSA-218ENST00000607814 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
CTSA-218ENST00000607814 GAGE10A6NGK3 116 aa8.26□□□□□ -1.09
CTSA-218ENST00000607814 LINC00310P59036 64 aa8.26□□□□□ -1.09
CTSA-218ENST00000607814 HIST3H2BBQ8N257 126 aa8.26□□□□□ -1.09
CTSA-218ENST00000607814 RPL37AP8A6NKH3 93 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms