RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 FBN3Q75N90 2809 aa4.96□□□□□ -1.61
CDC40-207ENST00000606893 IGHV3-30P01768 117 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 IGHV3-33P01772 117 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 COL7A1Q02388 2944 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 IGHV4-4A0A075B6R2 117 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 A0A0J9YXY3 114 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 TRBV10-2A0A0K0K1G8 114 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
CDC40-207ENST00000606893 H7C423 109 aa4.95□□□□□ -1.62
CDC40-207ENST00000606893 TRIAP1O43715 76 aa4.95□□□□□ -1.62
CDC40-207ENST00000606893 CRYGAP11844 174 aa4.95□□□□□ -1.62
CDC40-207ENST00000606893 IL17DQ8TAD2 202 aa4.95□□□□□ -1.62
CDC40-207ENST00000606893 V9GYY9 64 aa4.95□□□□□ -1.62
CDC40-207ENST00000606893 MED14OSP0DP75 135 aa4.95□□□□□ -1.62
CDC40-207ENST00000606893 PAX4O43316 350 aa4.94□□□□□ -1.62
CDC40-207ENST00000606893 RHOHQ15669 191 aa4.94□□□□□ -1.62
CDC40-207ENST00000606893 SLC25A29Q8N8R3 303 aa4.94□□□□□ -1.62
CDC40-207ENST00000606893 ANK2Q01484 3957 aa4.94□□□□□ -1.62
CDC40-207ENST00000606893 TMEM263Q8WUH6 116 aaKnown RBP4.93□□□□□ -1.62
CDC40-207ENST00000606893 C16orf74Q96GX8 76 aa4.93□□□□□ -1.62
CDC40-207ENST00000606893 CSMD3Q7Z407 3707 aa4.93□□□□□ -1.62
CDC40-207ENST00000606893 K7EIL1 84 aa4.93□□□□□ -1.62
CDC40-207ENST00000606893 A8MTW9 85 aa4.93□□□□□ -1.62
CDC40-207ENST00000606893 C9orf116Q5BN46 136 aaPredicted RBP4.93□□□□□ -1.62
CDC40-207ENST00000606893 A0A087WVE0 104 aa4.92□□□□□ -1.62
CDC40-207ENST00000606893 TRAV12-1A0A0B4J245 112 aa4.92□□□□□ -1.62
CDC40-207ENST00000606893 TMEM258P61165 79 aa4.92□□□□□ -1.62
CDC40-207ENST00000606893 TRBV27A0A0K0K1C4 114 aa4.92□□□□□ -1.62
CDC40-207ENST00000606893 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
CDC40-207ENST00000606893 RPL36AP83881 106 aaKnown RBP4.92□□□□□ -1.62
CDC40-207ENST00000606893 RPL36ALQ969Q0 106 aaKnown RBP4.92□□□□□ -1.62
CDC40-207ENST00000606893 DAD1P61803 113 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 SDIM1Q6ZPB5 146 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 LINC01561Q8N1V8 128 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 IGLV4-60A0A075B6I1 120 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 C9orf85Q96MD7 179 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 FAM240AA0A1B0GVK7 77 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 C1orf195Q5TG92 126 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
CDC40-207ENST00000606893 LEPROTO15243 131 aa4.9□□□□□ -1.62
CDC40-207ENST00000606893 COX6CP09669 75 aa4.9□□□□□ -1.62
CDC40-207ENST00000606893 C6orf226Q5I0X4 101 aa4.9□□□□□ -1.62
CDC40-207ENST00000606893 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.62
CDC40-207ENST00000606893 ICOSQ9Y6W8 199 aa4.9□□□□□ -1.62
CDC40-207ENST00000606893 IGKV3D-7A0A0C4DH55 119 aa4.9□□□□□ -1.63
CDC40-207ENST00000606893 LINC01546A6NGU7 62 aa4.9□□□□□ -1.63
CDC40-207ENST00000606893 IMUPQ9GZP8 106 aa4.9□□□□□ -1.63
CDC40-207ENST00000606893 SPART-AS1P0CW21 52 aa4.9□□□□□ -1.63
CDC40-207ENST00000606893 C19orf73Q9NVV2 129 aa4.9□□□□□ -1.63
CDC40-207ENST00000606893 GYPEP15421 78 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 FHL2Q14192 279 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 NTM-AS1Q6ZSK4 140 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 CHCHD7Q9BUK0 85 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 A0A0J9YWU9 116 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 PAPPA-AS1Q5QFB9 102 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 VSIG2Q96IQ7 327 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 UBE2D4Q9Y2X8 147 aa4.89□□□□□ -1.63
CDC40-207ENST00000606893 ATOX1O00244 68 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 NANOS2P60321 138 aaKnown RBP4.88□□□□□ -1.63
CDC40-207ENST00000606893 UPK3BQ9BT76 320 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 IGHV1-58A0A0C4DH39 117 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 H3BT86 120 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 ANGP03950 147 aaKnown RBP4.88□□□□□ -1.63
CDC40-207ENST00000606893 MIFP14174 115 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 FAM222AQ5U5X8 452 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 LINC00242Q5T6M2 205 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 SOSTDC1Q6X4U4 206 aa4.88□□□□□ -1.63
CDC40-207ENST00000606893 DAZ2Q13117 558 aaKnown RBP4.87□□□□□ -1.63
CDC40-207ENST00000606893 AMELXQ99217 191 aa4.87□□□□□ -1.63
CDC40-207ENST00000606893 C14orf132Q9NPU4 83 aa4.87□□□□□ -1.63
CDC40-207ENST00000606893 CELA1Q9UNI1 258 aa4.87□□□□□ -1.63
CDC40-207ENST00000606893 A0A0B4J2C4 111 aa4.87□□□□□ -1.63
CDC40-207ENST00000606893 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
CDC40-207ENST00000606893 LYRM9A8MSI8 78 aa4.87□□□□□ -1.63
CDC40-207ENST00000606893 RPL18AQ02543 176 aaKnown RBP4.87□□□□□ -1.63
CDC40-207ENST00000606893 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
CDC40-207ENST00000606893 TRBV30A0A0K0K1B3 111 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 K7EQD1 137 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 NCR3O14931 201 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 DNAL4O96015 105 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 GIG44P09565 113 aaPredicted RBP4.86□□□□□ -1.63
CDC40-207ENST00000606893 LINC00269Q8N2A0 174 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 XAGE1AQ9HD64 81 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 LECT2O14960 151 aa4.86□□□□□ -1.63
CDC40-207ENST00000606893 BAALC-AS2P0C853 105 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 HIST1H4AP62805 103 aaKnown RBP4.85□□□□□ -1.63
CDC40-207ENST00000606893 SS18Q15532 418 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 LINC00308Q8TCZ7 52 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 LINC00474Q9P2X8 69 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 LST1O00453 97 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 C11orf72Q8NBR9 251 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 FAM104AQ969W3 186 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 FAM218AQ96MZ4 157 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 SND1-IT1Q9HBX3 110 aa4.85□□□□□ -1.63
CDC40-207ENST00000606893 CRPP02741 224 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms