RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 SCGB3A1Q96QR1 104 aa10.02□□□□□ -0.81
TUBE1-206ENST00000603722 ALKBH7Q9BT30 221 aaPredicted RBP10.02□□□□□ -0.81
TUBE1-206ENST00000603722 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
TUBE1-206ENST00000603722 CDKN2A-AS1Q9UH64 79 aa10.02□□□□□ -0.81
TUBE1-206ENST00000603722 C6orf226Q5I0X4 101 aa10.01□□□□□ -0.81
TUBE1-206ENST00000603722 C9orf129Q5T035 196 aaKnown RBP10.01□□□□□ -0.81
TUBE1-206ENST00000603722 ERASQ7Z444 233 aa10.01□□□□□ -0.81
TUBE1-206ENST00000603722 Q8IZM0 81 aa10.01□□□□□ -0.81
TUBE1-206ENST00000603722 IGLV7-43P04211 117 aa10□□□□□ -0.81
TUBE1-206ENST00000603722 UBE2BP63146 152 aa10□□□□□ -0.81
TUBE1-206ENST00000603722 LRP2P98164 4655 aa9.99□□□□□ -0.81
TUBE1-206ENST00000603722 LINC00469Q8N7U9 141 aa9.99□□□□□ -0.81
TUBE1-206ENST00000603722 RHEBQ15382 184 aa9.98□□□□□ -0.81
TUBE1-206ENST00000603722 MRPL18Q9H0U6 180 aaKnown RBP9.98□□□□□ -0.81
TUBE1-206ENST00000603722 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
TUBE1-206ENST00000603722 FABP9Q0Z7S8 132 aa9.97□□□□□ -0.81
TUBE1-206ENST00000603722 COX19Q49B96 90 aa9.97□□□□□ -0.81
TUBE1-206ENST00000603722 FA2HQ7L5A8 372 aa9.97□□□□□ -0.81
TUBE1-206ENST00000603722 DIRC1Q969H9 104 aa9.97□□□□□ -0.81
TUBE1-206ENST00000603722 RPS10P5Q9NQ39 176 aa9.97□□□□□ -0.81
TUBE1-206ENST00000603722 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
TUBE1-206ENST00000603722 F8VRH5 84 aa9.96□□□□□ -0.82
TUBE1-206ENST00000603722 C10orf91Q5T1B1 145 aa9.96□□□□□ -0.82
TUBE1-206ENST00000603722 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
TUBE1-206ENST00000603722 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
TUBE1-206ENST00000603722 CARHSP1Q9Y2V2 147 aaKnown RBP9.96□□□□□ -0.82
TUBE1-206ENST00000603722 TINCRA0A1B0GVN0 87 aa9.95□□□□□ -0.82
TUBE1-206ENST00000603722 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
TUBE1-206ENST00000603722 H0Y9J4 135 aa9.94□□□□□ -0.82
TUBE1-206ENST00000603722 CXCL5P42830 114 aa9.94□□□□□ -0.82
TUBE1-206ENST00000603722 CST9LQ9H4G1 147 aa9.94□□□□□ -0.82
TUBE1-206ENST00000603722 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
TUBE1-206ENST00000603722 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
TUBE1-206ENST00000603722 PMVKQ15126 192 aa9.92□□□□□ -0.82
TUBE1-206ENST00000603722 PDZD11Q5EBL8 140 aa9.92□□□□□ -0.82
TUBE1-206ENST00000603722 COX7B2Q8TF08 81 aa9.92□□□□□ -0.82
TUBE1-206ENST00000603722 C22orf24Q9Y442 160 aa9.92□□□□□ -0.82
TUBE1-206ENST00000603722 PRR26Q8N8Z3 221 aa9.91□□□□□ -0.82
TUBE1-206ENST00000603722 TRAPPC1Q9Y5R8 145 aa9.89□□□□□ -0.83
TUBE1-206ENST00000603722 RNF213Q63HN8 5207 aa9.88□□□□□ -0.83
TUBE1-206ENST00000603722 A0A096LNJ9 63 aa9.88□□□□□ -0.83
TUBE1-206ENST00000603722 LBHQ53QV2 105 aaPredicted RBP9.88□□□□□ -0.83
TUBE1-206ENST00000603722 URB1-AS1Q96HZ7 61 aa9.88□□□□□ -0.83
TUBE1-206ENST00000603722 H3BRM9 83 aa9.87□□□□□ -0.83
TUBE1-206ENST00000603722 APOC3P02656 99 aa9.87□□□□□ -0.83
TUBE1-206ENST00000603722 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
TUBE1-206ENST00000603722 NDUFA6P56556 154 aa9.87□□□□□ -0.83
TUBE1-206ENST00000603722 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
TUBE1-206ENST00000603722 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
TUBE1-206ENST00000603722 LINC00614P0C842 121 aa9.86□□□□□ -0.83
TUBE1-206ENST00000603722 IGLC3P0DOY3 106 aa9.86□□□□□ -0.83
TUBE1-206ENST00000603722 RAB5BP61020 215 aa9.86□□□□□ -0.83
TUBE1-206ENST00000603722 PMCHL1Q16048 86 aa9.86□□□□□ -0.83
TUBE1-206ENST00000603722 NUPR1O60356 82 aa9.85□□□□□ -0.83
TUBE1-206ENST00000603722 HBDP02042 147 aa9.85□□□□□ -0.83
TUBE1-206ENST00000603722 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
TUBE1-206ENST00000603722 ZNF861PO60384 105 aa9.84□□□□□ -0.83
TUBE1-206ENST00000603722 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
TUBE1-206ENST00000603722 ATP5LO75964 103 aa9.83□□□□□ -0.84
TUBE1-206ENST00000603722 SNAPINO95295 136 aa9.83□□□□□ -0.84
TUBE1-206ENST00000603722 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
TUBE1-206ENST00000603722 NDUFA5Q16718 116 aa9.83□□□□□ -0.84
TUBE1-206ENST00000603722 SVBPQ8N300 66 aa9.83□□□□□ -0.84
TUBE1-206ENST00000603722 GAGE10A6NGK3 116 aa9.82□□□□□ -0.84
TUBE1-206ENST00000603722 IGLV5-39A0A0G2JS06 123 aa9.81□□□□□ -0.84
TUBE1-206ENST00000603722 RPL37AP8A6NKH3 93 aa9.81□□□□□ -0.84
TUBE1-206ENST00000603722 BCE1O60756 84 aa9.81□□□□□ -0.84
TUBE1-206ENST00000603722 LINC00167Q96N53 147 aa9.81□□□□□ -0.84
TUBE1-206ENST00000603722 LPAP08519 4548 aa9.81□□□□□ -0.84
TUBE1-206ENST00000603722 PFN2P35080 140 aa9.8□□□□□ -0.84
TUBE1-206ENST00000603722 IGLV5-37A0A075B6J1 123 aa9.79□□□□□ -0.84
TUBE1-206ENST00000603722 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
TUBE1-206ENST00000603722 NKAPP1Q8N9T2 125 aa9.79□□□□□ -0.84
TUBE1-206ENST00000603722 C11orf86A6NJI1 115 aa9.78□□□□□ -0.84
TUBE1-206ENST00000603722 RPL13AP40429 203 aaKnown RBP9.78□□□□□ -0.84
TUBE1-206ENST00000603722 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
TUBE1-206ENST00000603722 SCO1O75880 301 aa9.77□□□□□ -0.85
TUBE1-206ENST00000603722 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.85
TUBE1-206ENST00000603722 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
TUBE1-206ENST00000603722 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-206ENST00000603722 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
TUBE1-206ENST00000603722 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
TUBE1-206ENST00000603722 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
TUBE1-206ENST00000603722 SND1-IT1Q9HBX3 110 aa9.75□□□□□ -0.85
TUBE1-206ENST00000603722 CHTOPQ9Y3Y2 248 aaKnown RBP9.74□□□□□ -0.85
TUBE1-206ENST00000603722 CHCHD1Q96BP2 118 aaKnown RBP9.73□□□□□ -0.85
TUBE1-206ENST00000603722 VPREB1P12018 145 aa9.72□□□□□ -0.85
TUBE1-206ENST00000603722 UBE2AP49459 152 aa9.72□□□□□ -0.85
TUBE1-206ENST00000603722 COX17Q14061 63 aa9.72□□□□□ -0.85
TUBE1-206ENST00000603722 A0A087X002 238 aa9.71□□□□□ -0.86
TUBE1-206ENST00000603722 SFTA2Q6UW10 78 aa9.71□□□□□ -0.86
TUBE1-206ENST00000603722 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.86
TUBE1-206ENST00000603722 CBLN2Q8IUK8 224 aa9.71□□□□□ -0.86
TUBE1-206ENST00000603722 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.86
TUBE1-206ENST00000603722 TRAV12-1A0A0B4J245 112 aa9.7□□□□□ -0.86
TUBE1-206ENST00000603722 Q8NDZ9 215 aa9.7□□□□□ -0.86
TUBE1-206ENST00000603722 TMEM223A0PJW6 202 aa9.69□□□□□ -0.86
TUBE1-206ENST00000603722 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
TUBE1-206ENST00000603722 TMEM238C9JI98 176 aa9.68□□□□□ -0.86
TUBE1-206ENST00000603722 ANAPC11Q9NYG5 84 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms