RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 CKS1BP61024 79 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
HCG18-243ENST00000602498 PMCHL1Q16048 86 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 UQCC3Q6UW78 93 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 FA2HQ7L5A8 372 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 TOMM6Q96B49 74 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 LINC01600Q96MT4 127 aa3.47□□□□□ -1.85
HCG18-243ENST00000602498 ALKBH7Q9BT30 221 aaPredicted RBP3.47□□□□□ -1.85
HCG18-243ENST00000602498 NXT2Q9NPJ8 142 aaKnown RBP3.47□□□□□ -1.85
HCG18-243ENST00000602498 IGLV7-43P04211 117 aa3.46□□□□□ -1.86
HCG18-243ENST00000602498 PRR26Q8N8Z3 221 aa3.46□□□□□ -1.86
HCG18-243ENST00000602498 SEC11CQ9BY50 192 aa3.46□□□□□ -1.86
HCG18-243ENST00000602498 SMCO4Q9NRQ5 59 aa3.46□□□□□ -1.86
HCG18-243ENST00000602498 TRBV30A0A0K0K1B3 111 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 GAGE10A6NGK3 116 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 NDUFC2-KCTD14E9PQ53 114 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 SCO1O75880 301 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 APOC3P02656 99 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 TLX1NBP0CAT3 122 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 KRTAP10-8P60410 259 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 HERVK_113P63121 156 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 TIMM17AQ99595 171 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 GNB1LQ9BYB4 327 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 CST9LQ9H4G1 147 aa3.45□□□□□ -1.86
HCG18-243ENST00000602498 TRAV9-1A0A075B6T8 112 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 RPL37AP8A6NKH3 93 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 SMIM1B2RUZ4 78 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 F8WDY8 70 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 PAPPA-AS1Q5QFB9 102 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 ERASQ7Z444 233 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 Q8IZM0 81 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 COX7B2Q8TF08 81 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 URB1-AS1Q96HZ7 61 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 C22orf24Q9Y442 160 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 TRAPPC1Q9Y5R8 145 aa3.44□□□□□ -1.86
HCG18-243ENST00000602498 TINCRA0A1B0GVN0 87 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 F8VRH5 84 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 K7EMI3 77 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 PFN2P35080 140 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 PMVKQ15126 192 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 RHEBQ15382 184 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 FAM19A3Q7Z5A8 133 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 LINC01561Q8N1V8 128 aa3.43□□□□□ -1.86
HCG18-243ENST00000602498 ZNF625Q96I27 306 aaPredicted RBP3.43□□□□□ -1.86
HCG18-243ENST00000602498 CARHSP1Q9Y2V2 147 aaKnown RBP3.43□□□□□ -1.86
HCG18-243ENST00000602498 A0A096LNJ9 63 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 A0A0U1RRA0 63 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 H0Y9J4 135 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 NPSP0C0P6 89 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 G0S2P27469 103 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 SEC11AP67812 179 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 LRP2P98164 4655 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 C18orf32Q8TCD1 76 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 DIRC1Q969H9 104 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 ANAPC11Q9NYG5 84 aa3.42□□□□□ -1.86
HCG18-243ENST00000602498 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 IGLV5-45A0A087WSX0 123 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 LINC01546A6NGU7 62 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 H3BRM9 83 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 LINC00614P0C842 121 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 ZNF22P17026 224 aaPredicted RBP3.41□□□□□ -1.86
HCG18-243ENST00000602498 PDZD11Q5EBL8 140 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 TMEM170BQ5T4T1 132 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 BAGE3Q86Y29 109 aa3.41□□□□□ -1.86
HCG18-243ENST00000602498 C11orf86A6NJI1 115 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 H0Y8G0 127 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 ZNF861PO60384 105 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 ATP5LO75964 103 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 SNAPINO95295 136 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 TSPAN13O95857 204 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 HBDP02042 147 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 IGLC3P0DOY3 106 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 CXCL5P42830 114 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 NDUFA5Q16718 116 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 COX19Q49B96 90 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 LBHQ53QV2 105 aaPredicted RBP3.4□□□□□ -1.87
HCG18-243ENST00000602498 MRPL55Q7Z7F7 128 aaKnown RBP3.4□□□□□ -1.87
HCG18-243ENST00000602498 CBLN2Q8IUK8 224 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 RNF213Q63HN8 5207 aa3.4□□□□□ -1.87
HCG18-243ENST00000602498 LPAP08519 4548 aa3.39□□□□□ -1.87
HCG18-243ENST00000602498 SVBPQ8N300 66 aa3.39□□□□□ -1.87
HCG18-243ENST00000602498 FAM19A2Q8N3H0 131 aa3.39□□□□□ -1.87
HCG18-243ENST00000602498 NKAPP1Q8N9T2 125 aa3.39□□□□□ -1.87
HCG18-243ENST00000602498 Q8NDZ9 215 aa3.39□□□□□ -1.87
HCG18-243ENST00000602498 CHTOPQ9Y3Y2 248 aaKnown RBP3.39□□□□□ -1.87
HCG18-243ENST00000602498 A0A087X002 238 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 IGLV5-39A0A0G2JS06 123 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 TMEM238C9JI98 176 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 H3BS24 57 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 BCE1O60756 84 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 UBE2AP49459 152 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 PRLHP81277 87 aa3.38□□□□□ -1.87
HCG18-243ENST00000602498 SLC7A5P1Q8MH63 180 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms