RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 C1orf137Q5JT78 98 aa12.99□□□□□ -0.33
SNRPA-211ENST00000601545 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
SNRPA-211ENST00000601545 CARHSP1Q9Y2V2 147 aaKnown RBP12.99□□□□□ -0.33
SNRPA-211ENST00000601545 RHEBQ15382 184 aa12.98□□□□□ -0.33
SNRPA-211ENST00000601545 FA2HQ7L5A8 372 aa12.97□□□□□ -0.33
SNRPA-211ENST00000601545 NDUFC2-KCTD14E9PQ53 114 aa12.96□□□□□ -0.33
SNRPA-211ENST00000601545 SMCO4Q9NRQ5 59 aa12.96□□□□□ -0.33
SNRPA-211ENST00000601545 LINC01546A6NGU7 62 aa12.95□□□□□ -0.34
SNRPA-211ENST00000601545 Q8IZM0 81 aa12.95□□□□□ -0.34
SNRPA-211ENST00000601545 LINC00469Q8N7U9 141 aa12.95□□□□□ -0.34
SNRPA-211ENST00000601545 KRTAP7-1Q8IUC3 87 aa12.94□□□□□ -0.34
SNRPA-211ENST00000601545 TNXBP22105 4242 aa12.93□□□□□ -0.34
SNRPA-211ENST00000601545 LINC01549A6NIU2 74 aa12.93□□□□□ -0.34
SNRPA-211ENST00000601545 C9orf129Q5T035 196 aaKnown RBP12.93□□□□□ -0.34
SNRPA-211ENST00000601545 KRTAP11-1Q8IUC1 163 aa12.93□□□□□ -0.34
SNRPA-211ENST00000601545 CST9LQ9H4G1 147 aa12.93□□□□□ -0.34
SNRPA-211ENST00000601545 APOC3P02656 99 aa12.92□□□□□ -0.34
SNRPA-211ENST00000601545 TRAPPC1Q9Y5R8 145 aa12.92□□□□□ -0.34
SNRPA-211ENST00000601545 TINCRA0A1B0GVN0 87 aa12.91□□□□□ -0.34
SNRPA-211ENST00000601545 M0QXV9 152 aa12.91□□□□□ -0.34
SNRPA-211ENST00000601545 ODF1Q14990 250 aa12.91□□□□□ -0.34
SNRPA-211ENST00000601545 KRTAP10-8P60410 259 aa12.9□□□□□ -0.34
SNRPA-211ENST00000601545 UBE2BP63146 152 aa12.9□□□□□ -0.34
SNRPA-211ENST00000601545 PMVKQ15126 192 aa12.9□□□□□ -0.34
SNRPA-211ENST00000601545 IGLV7-43P04211 117 aa12.89□□□□□ -0.35
SNRPA-211ENST00000601545 XAGE1AQ9HD64 81 aa12.89□□□□□ -0.35
SNRPA-211ENST00000601545 SMIM1B2RUZ4 78 aa12.88□□□□□ -0.35
SNRPA-211ENST00000601545 F8VRH5 84 aa12.88□□□□□ -0.35
SNRPA-211ENST00000601545 NDUFA6P56556 154 aa12.87□□□□□ -0.35
SNRPA-211ENST00000601545 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
SNRPA-211ENST00000601545 COX7B2Q8TF08 81 aa12.87□□□□□ -0.35
SNRPA-211ENST00000601545 SNAPINO95295 136 aa12.86□□□□□ -0.35
SNRPA-211ENST00000601545 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
SNRPA-211ENST00000601545 LINC00614P0C842 121 aa12.86□□□□□ -0.35
SNRPA-211ENST00000601545 NDUFA5Q16718 116 aa12.86□□□□□ -0.35
SNRPA-211ENST00000601545 C18orf32Q8TCD1 76 aa12.86□□□□□ -0.35
SNRPA-211ENST00000601545 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
SNRPA-211ENST00000601545 CXCL5P42830 114 aa12.85□□□□□ -0.35
SNRPA-211ENST00000601545 URB1-AS1Q96HZ7 61 aa12.85□□□□□ -0.35
SNRPA-211ENST00000601545 SVBPQ8N300 66 aa12.84□□□□□ -0.35
SNRPA-211ENST00000601545 DIRC1Q969H9 104 aa12.84□□□□□ -0.35
SNRPA-211ENST00000601545 C22orf24Q9Y442 160 aa12.84□□□□□ -0.35
SNRPA-211ENST00000601545 PMCHL1Q16048 86 aa12.83□□□□□ -0.36
SNRPA-211ENST00000601545 A0A096LNJ9 63 aa12.82□□□□□ -0.36
SNRPA-211ENST00000601545 RAB5BP61020 215 aa12.82□□□□□ -0.36
SNRPA-211ENST00000601545 H3BRM9 83 aa12.81□□□□□ -0.36
SNRPA-211ENST00000601545 HBDP02042 147 aa12.8□□□□□ -0.36
SNRPA-211ENST00000601545 LBHQ53QV2 105 aaPredicted RBP12.79□□□□□ -0.36
SNRPA-211ENST00000601545 H0Y9J4 135 aa12.78□□□□□ -0.36
SNRPA-211ENST00000601545 IGLC3P0DOY3 106 aa12.78□□□□□ -0.36
SNRPA-211ENST00000601545 UBR4Q5T4S7 5183 aa12.77□□□□□ -0.37
SNRPA-211ENST00000601545 BAGE3Q86Y29 109 aa12.76□□□□□ -0.37
SNRPA-211ENST00000601545 PRR26Q8N8Z3 221 aa12.76□□□□□ -0.37
SNRPA-211ENST00000601545 ATP5LO75964 103 aa12.74□□□□□ -0.37
SNRPA-211ENST00000601545 ZNF22P17026 224 aaPredicted RBP12.74□□□□□ -0.37
SNRPA-211ENST00000601545 MRPL55Q7Z7F7 128 aaKnown RBP12.74□□□□□ -0.37
SNRPA-211ENST00000601545 PFN2P35080 140 aa12.72□□□□□ -0.37
SNRPA-211ENST00000601545 YPEL4Q96NS1 127 aa12.72□□□□□ -0.37
SNRPA-211ENST00000601545 TP73-AS1Q9UF72 201 aa12.72□□□□□ -0.37
SNRPA-211ENST00000601545 IGLV5-39A0A0G2JS06 123 aa12.71□□□□□ -0.37
SNRPA-211ENST00000601545 RPL37AP8A6NKH3 93 aa12.71□□□□□ -0.37
SNRPA-211ENST00000601545 NUPR1O60356 82 aa12.71□□□□□ -0.37
SNRPA-211ENST00000601545 LINC00167Q96N53 147 aa12.71□□□□□ -0.37
SNRPA-211ENST00000601545 GAGE10A6NGK3 116 aa12.7□□□□□ -0.38
SNRPA-211ENST00000601545 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
SNRPA-211ENST00000601545 ZNF861PO60384 105 aa12.7□□□□□ -0.38
SNRPA-211ENST00000601545 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
SNRPA-211ENST00000601545 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
SNRPA-211ENST00000601545 CHTOPQ9Y3Y2 248 aaKnown RBP12.68□□□□□ -0.38
SNRPA-211ENST00000601545 KRTAP1-4P0C5Y4 121 aa12.67□□□□□ -0.38
SNRPA-211ENST00000601545 CBLN2Q8IUK8 224 aa12.67□□□□□ -0.38
SNRPA-211ENST00000601545 NKAPP1Q8N9T2 125 aa12.67□□□□□ -0.38
SNRPA-211ENST00000601545 CHCHD1Q96BP2 118 aaKnown RBP12.67□□□□□ -0.38
SNRPA-211ENST00000601545 IGLV1-50A0A075B6I6 118 aa12.65□□□□□ -0.38
SNRPA-211ENST00000601545 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
SNRPA-211ENST00000601545 BCE1O60756 84 aa12.64□□□□□ -0.39
SNRPA-211ENST00000601545 IFI27L1Q96BM0 104 aa12.64□□□□□ -0.39
SNRPA-211ENST00000601545 IGLV5-37A0A075B6J1 123 aa12.63□□□□□ -0.39
SNRPA-211ENST00000601545 SCO1O75880 301 aa12.63□□□□□ -0.39
SNRPA-211ENST00000601545 LRP2P98164 4655 aa12.62□□□□□ -0.39
SNRPA-211ENST00000601545 RPL28P46779 137 aaKnown RBP12.62□□□□□ -0.39
SNRPA-211ENST00000601545 FAM19A2Q8N3H0 131 aa12.62□□□□□ -0.39
SNRPA-211ENST00000601545 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
SNRPA-211ENST00000601545 HSBP1O75506 76 aa12.61□□□□□ -0.39
SNRPA-211ENST00000601545 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
SNRPA-211ENST00000601545 TRGC2P03986 189 aa12.6□□□□□ -0.39
SNRPA-211ENST00000601545 COX17Q14061 63 aa12.6□□□□□ -0.39
SNRPA-211ENST00000601545 SLC7A5P1Q8MH63 180 aa12.6□□□□□ -0.39
SNRPA-211ENST00000601545 IGKV2-28A0A075B6P5 120 aa12.58□□□□□ -0.4
SNRPA-211ENST00000601545 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
SNRPA-211ENST00000601545 IGKV2D-28P01615 120 aa12.58□□□□□ -0.4
SNRPA-211ENST00000601545 A0A0U1RRA0 63 aa12.57□□□□□ -0.4
SNRPA-211ENST00000601545 VPREB1P12018 145 aa12.57□□□□□ -0.4
SNRPA-211ENST00000601545 RPL13AP40429 203 aaKnown RBP12.57□□□□□ -0.4
SNRPA-211ENST00000601545 LINC00158P58513 81 aa12.57□□□□□ -0.4
SNRPA-211ENST00000601545 RPL24P83731 157 aaKnown RBP12.57□□□□□ -0.4
SNRPA-211ENST00000601545 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
SNRPA-211ENST00000601545 UBE2AP49459 152 aa12.56□□□□□ -0.4
SNRPA-211ENST00000601545 H0Y8G0 127 aa12.55□□□□□ -0.4
SNRPA-211ENST00000601545 Q8NDZ9 215 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms