RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CTDSP1Q9GZU7 261 aa10.65□□□□□ -0.7
CHMP2A-208ENST00000601220 HERVK_113P63121 156 aa10.64□□□□□ -0.71
CHMP2A-208ENST00000601220 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
CHMP2A-208ENST00000601220 LBHQ53QV2 105 aaPredicted RBP10.64□□□□□ -0.71
CHMP2A-208ENST00000601220 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
CHMP2A-208ENST00000601220 F8VRH5 84 aa10.63□□□□□ -0.71
CHMP2A-208ENST00000601220 MT-ND4LP03901 98 aa10.63□□□□□ -0.71
CHMP2A-208ENST00000601220 TIMM17AQ99595 171 aa10.63□□□□□ -0.71
CHMP2A-208ENST00000601220 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
CHMP2A-208ENST00000601220 SEC11AP67812 179 aa10.62□□□□□ -0.71
CHMP2A-208ENST00000601220 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
CHMP2A-208ENST00000601220 A0A087X002 238 aa10.61□□□□□ -0.71
CHMP2A-208ENST00000601220 MRPL55Q7Z7F7 128 aaKnown RBP10.61□□□□□ -0.71
CHMP2A-208ENST00000601220 BCE1O60756 84 aa10.6□□□□□ -0.71
CHMP2A-208ENST00000601220 PAPPA-AS1Q5QFB9 102 aa10.6□□□□□ -0.71
CHMP2A-208ENST00000601220 SMIM1B2RUZ4 78 aa10.59□□□□□ -0.71
CHMP2A-208ENST00000601220 LINC00167Q96N53 147 aa10.59□□□□□ -0.71
CHMP2A-208ENST00000601220 GEMIN7Q9H840 131 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-208ENST00000601220 TSPAN13O95857 204 aa10.58□□□□□ -0.72
CHMP2A-208ENST00000601220 CXCL5P42830 114 aa10.58□□□□□ -0.72
CHMP2A-208ENST00000601220 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-208ENST00000601220 ERASQ7Z444 233 aa10.58□□□□□ -0.72
CHMP2A-208ENST00000601220 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
CHMP2A-208ENST00000601220 ADCYAP1P18509 176 aa10.57□□□□□ -0.72
CHMP2A-208ENST00000601220 G0S2P27469 103 aa10.57□□□□□ -0.72
CHMP2A-208ENST00000601220 KIAA1644Q3SXP7 199 aa10.57□□□□□ -0.72
CHMP2A-208ENST00000601220 PDZD11Q5EBL8 140 aa10.57□□□□□ -0.72
CHMP2A-208ENST00000601220 TINCRA0A1B0GVN0 87 aa10.56□□□□□ -0.72
CHMP2A-208ENST00000601220 RPL37AP8A6NKH3 93 aa10.56□□□□□ -0.72
CHMP2A-208ENST00000601220 KRTAP13-1Q8IUC0 172 aa10.56□□□□□ -0.72
CHMP2A-208ENST00000601220 IGLV5-37A0A075B6J1 123 aa10.55□□□□□ -0.72
CHMP2A-208ENST00000601220 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
CHMP2A-208ENST00000601220 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
CHMP2A-208ENST00000601220 SCGB3A1Q96QR1 104 aa10.55□□□□□ -0.72
CHMP2A-208ENST00000601220 CRYGAP11844 174 aa10.54□□□□□ -0.72
CHMP2A-208ENST00000601220 KRTAP13-2Q52LG2 175 aa10.54□□□□□ -0.72
CHMP2A-208ENST00000601220 ANAPC11Q9NYG5 84 aa10.54□□□□□ -0.72
CHMP2A-208ENST00000601220 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
CHMP2A-208ENST00000601220 CST9LQ9H4G1 147 aa10.53□□□□□ -0.72
CHMP2A-208ENST00000601220 GAGE10A6NGK3 116 aa10.52□□□□□ -0.73
CHMP2A-208ENST00000601220 SPINK8P0C7L1 97 aa10.5□□□□□ -0.73
CHMP2A-208ENST00000601220 RAB5BP61020 215 aa10.5□□□□□ -0.73
CHMP2A-208ENST00000601220 MUC17Q685J3 4493 aa10.5□□□□□ -0.73
CHMP2A-208ENST00000601220 TRAV9-1A0A075B6T8 112 aa10.48□□□□□ -0.73
CHMP2A-208ENST00000601220 RAB14P61106 215 aa10.48□□□□□ -0.73
CHMP2A-208ENST00000601220 LINC01549A6NIU2 74 aa10.47□□□□□ -0.73
CHMP2A-208ENST00000601220 SCO1O75880 301 aa10.47□□□□□ -0.73
CHMP2A-208ENST00000601220 PMVKQ15126 192 aa10.47□□□□□ -0.73
CHMP2A-208ENST00000601220 FAT4Q6V0I7 4981 aa10.47□□□□□ -0.73
CHMP2A-208ENST00000601220 FAM229BQ4G0N7 80 aa10.46□□□□□ -0.73
CHMP2A-208ENST00000601220 GNB1LQ9BYB4 327 aa10.46□□□□□ -0.73
CHMP2A-208ENST00000601220 MRPL18Q9H0U6 180 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-208ENST00000601220 CLLU1Q5K131 121 aa10.45□□□□□ -0.74
CHMP2A-208ENST00000601220 NKAPP1Q8N9T2 125 aa10.45□□□□□ -0.74
CHMP2A-208ENST00000601220 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
CHMP2A-208ENST00000601220 UBE2AP49459 152 aa10.44□□□□□ -0.74
CHMP2A-208ENST00000601220 LCE2AQ5TA79 106 aaPredicted RBP10.44□□□□□ -0.74
CHMP2A-208ENST00000601220 IGKV2-28A0A075B6P5 120 aa10.43□□□□□ -0.74
CHMP2A-208ENST00000601220 A0A0U1RQV1 116 aa10.43□□□□□ -0.74
CHMP2A-208ENST00000601220 TMEM218A2RU14 115 aa10.43□□□□□ -0.74
CHMP2A-208ENST00000601220 IGKV2D-28P01615 120 aa10.43□□□□□ -0.74
CHMP2A-208ENST00000601220 ATP5LO75964 103 aa10.42□□□□□ -0.74
CHMP2A-208ENST00000601220 IGLC3P0DOY3 106 aa10.42□□□□□ -0.74
CHMP2A-208ENST00000601220 VPREB1P12018 145 aa10.42□□□□□ -0.74
CHMP2A-208ENST00000601220 RETNLBQ9BQ08 111 aa10.42□□□□□ -0.74
CHMP2A-208ENST00000601220 A0A096LNJ9 63 aa10.41□□□□□ -0.74
CHMP2A-208ENST00000601220 H3BRM9 83 aa10.41□□□□□ -0.74
CHMP2A-208ENST00000601220 PFN2P35080 140 aa10.41□□□□□ -0.74
CHMP2A-208ENST00000601220 LINC00304Q8N9R0 145 aa10.41□□□□□ -0.74
CHMP2A-208ENST00000601220 Q8NDZ9 215 aa10.41□□□□□ -0.74
CHMP2A-208ENST00000601220 PRLHP81277 87 aa10.4□□□□□ -0.74
CHMP2A-208ENST00000601220 UQCC3Q6UW78 93 aa10.4□□□□□ -0.74
CHMP2A-208ENST00000601220 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.74
CHMP2A-208ENST00000601220 TMEM238C9JI98 176 aa10.39□□□□□ -0.75
CHMP2A-208ENST00000601220 FA2HQ7L5A8 372 aa10.39□□□□□ -0.75
CHMP2A-208ENST00000601220 KRTAP9-2Q9BYQ4 174 aa10.39□□□□□ -0.75
CHMP2A-208ENST00000601220 TMEM126AQ9H061 195 aa10.39□□□□□ -0.75
CHMP2A-208ENST00000601220 M0R378 163 aa10.38□□□□□ -0.75
CHMP2A-208ENST00000601220 ZNF22P17026 224 aaPredicted RBP10.38□□□□□ -0.75
CHMP2A-208ENST00000601220 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
CHMP2A-208ENST00000601220 CTAG1AP78358 180 aa10.37□□□□□ -0.75
CHMP2A-208ENST00000601220 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
CHMP2A-208ENST00000601220 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
CHMP2A-208ENST00000601220 IGKV2D-26A0A0A0MRZ7 120 aa10.36□□□□□ -0.75
CHMP2A-208ENST00000601220 S100PP25815 95 aa10.36□□□□□ -0.75
CHMP2A-208ENST00000601220 FABP9Q0Z7S8 132 aa10.36□□□□□ -0.75
CHMP2A-208ENST00000601220 TPRXLQ17RH7 258 aa10.36□□□□□ -0.75
CHMP2A-208ENST00000601220 COX19Q49B96 90 aa10.36□□□□□ -0.75
CHMP2A-208ENST00000601220 FAM19A1Q7Z5A9 133 aa10.36□□□□□ -0.75
CHMP2A-208ENST00000601220 SEC11CQ9BY50 192 aa10.36□□□□□ -0.75
CHMP2A-208ENST00000601220 COX17Q14061 63 aa10.35□□□□□ -0.75
CHMP2A-208ENST00000601220 SMCO4Q9NRQ5 59 aa10.35□□□□□ -0.75
CHMP2A-208ENST00000601220 IFITM2Q01629 132 aa10.34□□□□□ -0.75
CHMP2A-208ENST00000601220 IGLV7-46A0A075B6I9 117 aa10.33□□□□□ -0.76
CHMP2A-208ENST00000601220 RPL24P83731 157 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-208ENST00000601220 C3orf22Q8N5N4 141 aa10.33□□□□□ -0.76
CHMP2A-208ENST00000601220 ZNF625Q96I27 306 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-208ENST00000601220 NDUFA6P56556 154 aa10.32□□□□□ -0.76
CHMP2A-208ENST00000601220 C11orf86A6NJI1 115 aa10.31□□□□□ -0.76
CHMP2A-208ENST00000601220 C10orf91Q5T1B1 145 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms