RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, human

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00343-208	ENST00000599264	OR2D3	Q8NGH3	330 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	WDR61	Q9GZS3	305 aa	Known RBP	2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	EPDR1	Q9UM22	224 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	ARL2-SNX15	V9GYD0	113 aa		2.7	□□□□□ -1.98
LINC00343-208	ENST00000599264	MUC21	A0A140T8X8	626 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	C17orf112	F2Z3M2	114 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	STAG3L2	P0CL84	134 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	DEFA3	P59666	94 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	IFITM3	Q01628	133 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	KRTAP19-6	Q3LI70	58 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	COX19	Q49B96	90 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	SPAG11A	Q6PDA7	123 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264		Q86TA4	180 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	IMMP2L	Q96T52	175 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	LINC00846	Q9NV44	126 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	MRPL35	Q9NZE8	188 aa	Known RBP	2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	UBE2D4	Q9Y2X8	147 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	MDN1	Q9NU22	5596 aa		2.69	□□□□□ -1.98
LINC00343-208	ENST00000599264	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	IGKV2-29	A2NJV5	120 aa	Predicted RBP	2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264		G3V3Q6	166 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	COX7A2L	O14548	114 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	HMGB3	O15347	200 aa	Known RBP	2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	BCE1	O60756	84 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	SMIM17	P0DL12	118 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	PVALB	P20472	110 aa	Predicted RBP	2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	SPAG11B	Q08648	103 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	SPANXN1	Q5VSR9	72 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	C3orf22	Q8N5N4	141 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	VCX3B	Q9H321	246 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	SMDT1	Q9H4I9	107 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	C8orf17	Q9NRJ1	99 aa		2.68	□□□□□ -1.98
LINC00343-208	ENST00000599264	MGP	P08493	103 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	ARL14EPL	P0DKL9	152 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	ZNF25	P17030	456 aa	Predicted RBP	2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	KRTAP12-4	P60329	112 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	RNASE13	Q5GAN3	156 aa	Known RBP	2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	RASL11A	Q6T310	242 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	TOMM5	Q8N4H5	51 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	AP1S3	Q96PC3	154 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	NIT2	Q9NQR4	276 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	C6orf48	Q9UBA6	75 aa		2.67	□□□□□ -1.98
LINC00343-208	ENST00000599264	NDUFB6	O95139	128 aa		2.66	□□□□□ -1.98
LINC00343-208	ENST00000599264	CXCL1	P09341	107 aa		2.66	□□□□□ -1.98
LINC00343-208	ENST00000599264	OR5AL1	P0C617	328 aa		2.66	□□□□□ -1.98
LINC00343-208	ENST00000599264	NTF3	P20783	257 aa		2.66	□□□□□ -1.98
LINC00343-208	ENST00000599264	AP3S2	P59780	193 aa		2.66	□□□□□ -1.98
LINC00343-208	ENST00000599264	IL15RA	Q13261	267 aa		2.66	□□□□□ -1.98
LINC00343-208	ENST00000599264	NDUFA1	O15239	70 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	NCR2	O95944	276 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	GCHFR	P30047	84 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	VAMP3	Q15836	100 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	TMEM241	Q24JQ0	296 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	C5orf38	Q86SI9	138 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	OR10D4P	Q8NGN7	298 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	BTF3L4	Q96K17	158 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	CDC42SE2	Q9NRR3	84 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	ZFP30	Q9Y2G7	519 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	C22orf24	Q9Y442	160 aa		2.65	□□□□□ -1.99
LINC00343-208	ENST00000599264	GPR98	Q8WXG9	6306 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264	C1orf196	B1AJZ1	125 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264	UPK1B	O75841	260 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264	MT2A	P02795	61 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264	C6orf99	Q4VX62	202 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264		Q9H521	79 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264	VCX3A	Q9NNX9	186 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264	NDUFA12	Q9UI09	145 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264	ALG5	Q9Y673	324 aa		2.64	□□□□□ -1.99
LINC00343-208	ENST00000599264		A0A087WXM4	84 aa		2.63	□□□□□ -1.99
LINC00343-208	ENST00000599264		A0A1W2PRE2	83 aa		2.63	□□□□□ -1.99
LINC00343-208	ENST00000599264	CDC34	P49427	236 aa	Predicted RBP	2.63	□□□□□ -1.99
LINC00343-208	ENST00000599264	ENKUR	Q8TC29	256 aa		2.63	□□□□□ -1.99
LINC00343-208	ENST00000599264	ORAOV1	Q8WV07	137 aa		2.63	□□□□□ -1.99
LINC00343-208	ENST00000599264	TMEM167B	Q9NRX6	74 aa		2.63	□□□□□ -1.99
LINC00343-208	ENST00000599264	SPINK1	P00995	79 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	LTA	P01374	205 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	MT1F	P04733	61 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	PYDC2	Q56P42	97 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	MRPL52	Q86TS9	123 aa	Known RBP	2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	FAM19A2	Q8N3H0	131 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	LINC00469	Q8N7U9	141 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	SCGB1C1	Q8TD33	95 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	HIST1H2BA	Q96A08	127 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	FMC1	Q96HJ9	113 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	PACRG	Q96M98	296 aa	Predicted RBP	2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	TP73-AS1	Q9UF72	201 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	CBY1	Q9Y3M2	126 aa		2.62	□□□□□ -1.99
LINC00343-208	ENST00000599264	TRAV13-1	A0A0B4J241	112 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	TRBV30	A0A0K0K1B3	111 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	PSPHP1	O15172	72 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	KRTAP2-3	P0C7H8	128 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	KRTAP12-3	P60328	96 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	UBE2G2	P60604	165 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	UBE2G1	P62253	170 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	GATD1	Q8NB37	220 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	RPL39L	Q96EH5	51 aa	Known RBP	2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	MARVELD1	Q9BSK0	173 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	KRTAP2-4	Q9BYR9	128 aa		2.61	□□□□□ -1.99
LINC00343-208	ENST00000599264	NAP1L6	A6NFF2	107 aa		2.6	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms