RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 A0A096LNJ9 63 aa8.07□□□□□ -1.12
USE1-207ENST00000596136 NDUFC2-KCTD14E9PQ53 114 aa8.07□□□□□ -1.12
USE1-207ENST00000596136 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
USE1-207ENST00000596136 C18orf32Q8TCD1 76 aa8.07□□□□□ -1.12
USE1-207ENST00000596136 YPEL4Q96NS1 127 aa8.07□□□□□ -1.12
USE1-207ENST00000596136 GEMIN7Q9H840 131 aaKnown RBP8.07□□□□□ -1.12
USE1-207ENST00000596136 SMCO4Q9NRQ5 59 aa8.07□□□□□ -1.12
USE1-207ENST00000596136 PRSS2P07478 247 aa8.06□□□□□ -1.12
USE1-207ENST00000596136 PMVKQ15126 192 aa8.06□□□□□ -1.12
USE1-207ENST00000596136 C6orf226Q5I0X4 101 aa8.06□□□□□ -1.12
USE1-207ENST00000596136 PACRGQ96M98 296 aaPredicted RBP8.06□□□□□ -1.12
USE1-207ENST00000596136 LINC00614P0C842 121 aa8.05□□□□□ -1.12
USE1-207ENST00000596136 SERTAD4-AS1Q5TG53 156 aa8.05□□□□□ -1.12
USE1-207ENST00000596136 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
USE1-207ENST00000596136 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
USE1-207ENST00000596136 TOMM7Q9P0U1 55 aa8.05□□□□□ -1.12
USE1-207ENST00000596136 FAM168BA1KXE4 195 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 CKS1BP61024 79 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 PDZD11Q5EBL8 140 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 LINC00469Q8N7U9 141 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 LINC01600Q96MT4 127 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
USE1-207ENST00000596136 F8VRH5 84 aa8.03□□□□□ -1.12
USE1-207ENST00000596136 CXCL5P42830 114 aa8.03□□□□□ -1.12
USE1-207ENST00000596136 ODF1Q14990 250 aa8.03□□□□□ -1.12
USE1-207ENST00000596136 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
USE1-207ENST00000596136 RAB5BP61020 215 aa8.02□□□□□ -1.13
USE1-207ENST00000596136 HBDP02042 147 aa8.01□□□□□ -1.13
USE1-207ENST00000596136 IGLC3P0DOY3 106 aa8.01□□□□□ -1.13
USE1-207ENST00000596136 KRTAP11-1Q8IUC1 163 aa8.01□□□□□ -1.13
USE1-207ENST00000596136 FAM19A5Q7Z5A7 132 aaPredicted RBP8□□□□□ -1.13
USE1-207ENST00000596136 COX7B2Q8TF08 81 aa8□□□□□ -1.13
USE1-207ENST00000596136 IGLV5-39A0A0G2JS06 123 aa7.99□□□□□ -1.13
USE1-207ENST00000596136 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
USE1-207ENST00000596136 REG3GQ6UW15 175 aa7.99□□□□□ -1.13
USE1-207ENST00000596136 H3BRM9 83 aa7.98□□□□□ -1.13
USE1-207ENST00000596136 M0QXV9 152 aa7.98□□□□□ -1.13
USE1-207ENST00000596136 ATP5LO75964 103 aa7.98□□□□□ -1.13
USE1-207ENST00000596136 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
USE1-207ENST00000596136 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
USE1-207ENST00000596136 PMCHL1Q16048 86 aa7.98□□□□□ -1.13
USE1-207ENST00000596136 IGLV7-43P04211 117 aa7.97□□□□□ -1.13
USE1-207ENST00000596136 CHCHD1Q96BP2 118 aaKnown RBP7.97□□□□□ -1.13
USE1-207ENST00000596136 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
USE1-207ENST00000596136 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
USE1-207ENST00000596136 XAGE1AQ9HD64 81 aa7.96□□□□□ -1.14
USE1-207ENST00000596136 NDUFA6P56556 154 aa7.95□□□□□ -1.14
USE1-207ENST00000596136 TP73-AS1Q9UF72 201 aa7.95□□□□□ -1.14
USE1-207ENST00000596136 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
USE1-207ENST00000596136 BAGE3Q86Y29 109 aa7.94□□□□□ -1.14
USE1-207ENST00000596136 SLC7A5P1Q8MH63 180 aa7.94□□□□□ -1.14
USE1-207ENST00000596136 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
USE1-207ENST00000596136 TRAV12-1A0A0B4J245 112 aa7.93□□□□□ -1.14
USE1-207ENST00000596136 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
USE1-207ENST00000596136 UBE2BP63146 152 aa7.93□□□□□ -1.14
USE1-207ENST00000596136 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
USE1-207ENST00000596136 LBHQ53QV2 105 aaPredicted RBP7.92□□□□□ -1.14
USE1-207ENST00000596136 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
USE1-207ENST00000596136 H0Y9J4 135 aa7.91□□□□□ -1.14
USE1-207ENST00000596136 TRGC2P03986 189 aa7.91□□□□□ -1.14
USE1-207ENST00000596136 IFI27L1Q96BM0 104 aa7.91□□□□□ -1.14
USE1-207ENST00000596136 CHTOPQ9Y3Y2 248 aaKnown RBP7.91□□□□□ -1.14
USE1-207ENST00000596136 NUPR1O60356 82 aa7.9□□□□□ -1.14
USE1-207ENST00000596136 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
USE1-207ENST00000596136 COLCA2A8K830 154 aa7.89□□□□□ -1.15
USE1-207ENST00000596136 COX17Q14061 63 aa7.89□□□□□ -1.15
USE1-207ENST00000596136 TMEM170BQ5T4T1 132 aa7.89□□□□□ -1.15
USE1-207ENST00000596136 SFTA2Q6UW10 78 aa7.89□□□□□ -1.15
USE1-207ENST00000596136 ZNF625Q96I27 306 aaPredicted RBP7.89□□□□□ -1.15
USE1-207ENST00000596136 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
USE1-207ENST00000596136 HSBP1O75506 76 aa7.88□□□□□ -1.15
USE1-207ENST00000596136 LINC00310P59036 64 aa7.88□□□□□ -1.15
USE1-207ENST00000596136 FAM19A2Q8N3H0 131 aa7.88□□□□□ -1.15
USE1-207ENST00000596136 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
USE1-207ENST00000596136 ERG28Q9UKR5 140 aa7.88□□□□□ -1.15
USE1-207ENST00000596136 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
USE1-207ENST00000596136 ZNF861PO60384 105 aa7.87□□□□□ -1.15
USE1-207ENST00000596136 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
USE1-207ENST00000596136 PFN2P35080 140 aa7.86□□□□□ -1.15
USE1-207ENST00000596136 SERF1AO75920 110 aa7.85□□□□□ -1.15
USE1-207ENST00000596136 SND1-IT1Q9HBX3 110 aa7.85□□□□□ -1.15
USE1-207ENST00000596136 BCE1O60756 84 aa7.84□□□□□ -1.15
USE1-207ENST00000596136 VPREB1P12018 145 aa7.84□□□□□ -1.15
USE1-207ENST00000596136 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
USE1-207ENST00000596136 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
USE1-207ENST00000596136 IGLV1-50A0A075B6I6 118 aa7.83□□□□□ -1.16
USE1-207ENST00000596136 RPL37AP8A6NKH3 93 aa7.83□□□□□ -1.16
USE1-207ENST00000596136 LEPROTL1O95214 131 aa7.83□□□□□ -1.16
USE1-207ENST00000596136 LRP2P98164 4655 aa7.83□□□□□ -1.16
USE1-207ENST00000596136 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
USE1-207ENST00000596136 NKAPP1Q8N9T2 125 aa7.83□□□□□ -1.16
USE1-207ENST00000596136 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
USE1-207ENST00000596136 RPL28P46779 137 aaKnown RBP7.81□□□□□ -1.16
USE1-207ENST00000596136 RPL24P83731 157 aaKnown RBP7.81□□□□□ -1.16
USE1-207ENST00000596136 KRTAP13-1Q8IUC0 172 aa7.81□□□□□ -1.16
USE1-207ENST00000596136 Q8NDZ9 215 aa7.8□□□□□ -1.16
USE1-207ENST00000596136 HSPB8Q9UJY1 196 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms