RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 RAB5BP61020 215 aa6.28□□□□□ -1.4
SHKBP1-210ENST00000595874 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
SHKBP1-210ENST00000595874 PRR26Q8N8Z3 221 aa6.28□□□□□ -1.4
SHKBP1-210ENST00000595874 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
SHKBP1-210ENST00000595874 F8WDY8 70 aa6.27□□□□□ -1.41
SHKBP1-210ENST00000595874 HERVK_113P63121 156 aa6.27□□□□□ -1.41
SHKBP1-210ENST00000595874 PMCHL1Q16048 86 aa6.27□□□□□ -1.41
SHKBP1-210ENST00000595874 SEC11CQ9BY50 192 aa6.27□□□□□ -1.41
SHKBP1-210ENST00000595874 SMCO4Q9NRQ5 59 aa6.27□□□□□ -1.41
SHKBP1-210ENST00000595874 GAGE10A6NGK3 116 aa6.26□□□□□ -1.41
SHKBP1-210ENST00000595874 Q8IZM0 81 aa6.26□□□□□ -1.41
SHKBP1-210ENST00000595874 TIMM17AQ99595 171 aa6.26□□□□□ -1.41
SHKBP1-210ENST00000595874 SMIM1B2RUZ4 78 aa6.25□□□□□ -1.41
SHKBP1-210ENST00000595874 ERASQ7Z444 233 aa6.25□□□□□ -1.41
SHKBP1-210ENST00000595874 COX7B2Q8TF08 81 aa6.25□□□□□ -1.41
SHKBP1-210ENST00000595874 GNB1LQ9BYB4 327 aa6.25□□□□□ -1.41
SHKBP1-210ENST00000595874 C22orf24Q9Y442 160 aa6.25□□□□□ -1.41
SHKBP1-210ENST00000595874 TRAV9-1A0A075B6T8 112 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 RPL37AP8A6NKH3 93 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 K7EMI3 77 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 SCO1O75880 301 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 PAPPA-AS1Q5QFB9 102 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 TRAPPC1Q9Y5R8 145 aa6.24□□□□□ -1.41
SHKBP1-210ENST00000595874 F8VRH5 84 aa6.23□□□□□ -1.41
SHKBP1-210ENST00000595874 H0Y9J4 135 aa6.23□□□□□ -1.41
SHKBP1-210ENST00000595874 APOC3P02656 99 aa6.23□□□□□ -1.41
SHKBP1-210ENST00000595874 SEC11AP67812 179 aa6.23□□□□□ -1.41
SHKBP1-210ENST00000595874 DIRC1Q969H9 104 aa6.23□□□□□ -1.41
SHKBP1-210ENST00000595874 URB1-AS1Q96HZ7 61 aa6.23□□□□□ -1.41
SHKBP1-210ENST00000595874 CST9LQ9H4G1 147 aa6.23□□□□□ -1.41
SHKBP1-210ENST00000595874 TINCRA0A1B0GVN0 87 aa6.22□□□□□ -1.41
SHKBP1-210ENST00000595874 G0S2P27469 103 aa6.22□□□□□ -1.41
SHKBP1-210ENST00000595874 PFN2P35080 140 aa6.22□□□□□ -1.41
SHKBP1-210ENST00000595874 PMVKQ15126 192 aa6.22□□□□□ -1.41
SHKBP1-210ENST00000595874 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
SHKBP1-210ENST00000595874 RNF213Q63HN8 5207 aa6.21□□□□□ -1.41
SHKBP1-210ENST00000595874 A0A096LNJ9 63 aa6.21□□□□□ -1.42
SHKBP1-210ENST00000595874 NPSP0C0P6 89 aa6.21□□□□□ -1.42
SHKBP1-210ENST00000595874 RHEBQ15382 184 aa6.21□□□□□ -1.42
SHKBP1-210ENST00000595874 C10orf91Q5T1B1 145 aa6.21□□□□□ -1.42
SHKBP1-210ENST00000595874 CARHSP1Q9Y2V2 147 aaKnown RBP6.21□□□□□ -1.42
SHKBP1-210ENST00000595874 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
SHKBP1-210ENST00000595874 PDZD11Q5EBL8 140 aa6.2□□□□□ -1.42
SHKBP1-210ENST00000595874 C18orf32Q8TCD1 76 aa6.2□□□□□ -1.42
SHKBP1-210ENST00000595874 LINC00167Q96N53 147 aa6.2□□□□□ -1.42
SHKBP1-210ENST00000595874 ZNF22P17026 224 aaPredicted RBP6.19□□□□□ -1.42
SHKBP1-210ENST00000595874 COX19Q49B96 90 aa6.19□□□□□ -1.42
SHKBP1-210ENST00000595874 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
SHKBP1-210ENST00000595874 ANAPC11Q9NYG5 84 aa6.19□□□□□ -1.42
SHKBP1-210ENST00000595874 IGLV5-45A0A087WSX0 123 aa6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 A0A0U1RRA0 63 aa6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 TSPAN13O95857 204 aa6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 LINC00614P0C842 121 aa6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 CXCL5P42830 114 aa6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 LBHQ53QV2 105 aaPredicted RBP6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
SHKBP1-210ENST00000595874 IGKV2-28A0A075B6P5 120 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 C11orf86A6NJI1 115 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 H3BRM9 83 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 ATP5LO75964 103 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 IGKV2D-28P01615 120 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 HBDP02042 147 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 IGLC3P0DOY3 106 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 BAGE3Q86Y29 109 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 NKAPP1Q8N9T2 125 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 LRP2P98164 4655 aa6.17□□□□□ -1.42
SHKBP1-210ENST00000595874 H0Y8G0 127 aa6.16□□□□□ -1.42
SHKBP1-210ENST00000595874 ZNF861PO60384 105 aa6.16□□□□□ -1.42
SHKBP1-210ENST00000595874 LPAP08519 4548 aa6.16□□□□□ -1.42
SHKBP1-210ENST00000595874 NUPR1O60356 82 aa6.15□□□□□ -1.42
SHKBP1-210ENST00000595874 SNAPINO95295 136 aa6.15□□□□□ -1.42
SHKBP1-210ENST00000595874 UBE2AP49459 152 aa6.15□□□□□ -1.42
SHKBP1-210ENST00000595874 NDUFA5Q16718 116 aa6.15□□□□□ -1.42
SHKBP1-210ENST00000595874 CHTOPQ9Y3Y2 248 aaKnown RBP6.15□□□□□ -1.42
SHKBP1-210ENST00000595874 BCE1O60756 84 aa6.14□□□□□ -1.43
SHKBP1-210ENST00000595874 PRR4Q16378 134 aa6.14□□□□□ -1.43
SHKBP1-210ENST00000595874 CBLN2Q8IUK8 224 aa6.14□□□□□ -1.43
SHKBP1-210ENST00000595874 SVBPQ8N300 66 aa6.14□□□□□ -1.43
SHKBP1-210ENST00000595874 Q8NDZ9 215 aa6.14□□□□□ -1.43
SHKBP1-210ENST00000595874 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
SHKBP1-210ENST00000595874 IGLV1-50A0A075B6I6 118 aa6.13□□□□□ -1.43
SHKBP1-210ENST00000595874 A0A087X002 238 aa6.13□□□□□ -1.43
SHKBP1-210ENST00000595874 LINC01549A6NIU2 74 aa6.13□□□□□ -1.43
SHKBP1-210ENST00000595874 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
SHKBP1-210ENST00000595874 PRLHP81277 87 aa6.13□□□□□ -1.43
SHKBP1-210ENST00000595874 FAM19A2Q8N3H0 131 aa6.13□□□□□ -1.43
SHKBP1-210ENST00000595874 SND1-IT1Q9HBX3 110 aa6.13□□□□□ -1.43
SHKBP1-210ENST00000595874 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
SHKBP1-210ENST00000595874 RPL28P46779 137 aaKnown RBP6.12□□□□□ -1.43
SHKBP1-210ENST00000595874 LINC00158P58513 81 aa6.12□□□□□ -1.43
SHKBP1-210ENST00000595874 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
SHKBP1-210ENST00000595874 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
SHKBP1-210ENST00000595874 VPREB1P12018 145 aa6.1□□□□□ -1.43
SHKBP1-210ENST00000595874 TYMSOSQ8TAI1 123 aa6.1□□□□□ -1.43
SHKBP1-210ENST00000595874 IFI27L1Q96BM0 104 aa6.1□□□□□ -1.43
SHKBP1-210ENST00000595874 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
SHKBP1-210ENST00000595874 IGLV5-37A0A075B6J1 123 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms